Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03630.t01
CDS Infomation

cds chromosome:12X:12:4458443:4466936:1 gene:VIT_12s0028g03630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGATGATTACGCATCACAGTCTTCGCAGAGTTCGATCTCCAAGAAGCACAAACAG
AATGAGGTGGTTCTCTCTGATGGAATCCACATTGAAAGAGATGAAGGTCCAACTGGGTTA
TCTATTACTGAGGAGAAAGTTGTGACGGGTGGGAACAAGGGGAAATCAAAAATAGATTGT
GATGAGACATGGCAAAACCAAGCTCAGGTTGCTTTGGCCAATGATGTTCGAAATCCTACC
AGTGAAGCAGGATCAGAGGACAGTCCTGATCCTCTTAAGAGCTTTGCATCAGGATCAAGT
GACTTAATCAATATCAATGGTTTCAATTCTGATTTGTCCTATCATGATGATGATGCTATT
GATGACGACGACGACGATGATGTTTCTGGTTATGATGACAATGATGATTTTTTGTATGAT
GATGATTATTTAAAACTGCAAGCCCAATTTGATAATGTAGATATACCTCCTGGAGTAGAG
GCATCAGTTCCTTGGTTGAAAGACCCTACTCCGAGTGAAAAAATGCCAGCTGTTGTGGAC
ACTTCTCCTACTCCAAGTTTGCAAGGGCAATGTGCTCGTGTAGGATCGTTTTCAGATCCT
GGTGAAAAGGAAACAAAGACAGCTGCTACAAGCAGTTCAACAGTCCCTGCACAGTCTGGG
GATGGCAACCAAGATGACGTGCTGGGAAAATATCTTTTCTTTAAACAATTTGATACTGTT
GAAGATTTTTCAGATCACCACTTTAGCCGAATGGGCTTTGTAGGAGAGCAGCCACCCAAG
AATTGGGCAAAGAAAATTCAGGAAGAGTGGAAGATTCTAGAGAGGGACTTACCAGAAACA
ATTTTTGTAAGAGTTTATGAGGCAAGGATGGATCTTTTGAGGGCTGTCATTGTTGGACCA
GCAGGCACTCCCTACCATGATGGTCTTTTTGTCTTTGATGTTCTCTTCCCTCCTAACTAT
CCTAGCGTACCACCGATGGTTTACTACTATTCTGGTGGTCTTCGACTAAACCCAAACTTA
TATGATTGTGGGAAAGTTTGCCTCAGCCTTCTAAATACTTGGAATGGTAAAAAGACAGAA
ATGTGGATTCCAGGGAAATCAACCATGTTACAAGTTTTGGTCTCTATACAAGGTCTGATT
CTGAATGCAAAGCCCTTTTTTAATGAGCCTGGGTATGAAAATATGTATGTTGGGGAAGAT
GGGGAGAGGAGATCCAAGCAGTATAATGAGGATGTGTTTATTCTGTCCTTGAAGACAATG
GTGTATACGATTAGGAGGCCCCCAAAGCATTTTGAGGACTTTGTTGTTGGTCATTTCCGC
CAGCGAGCGCATGACATTCTGGTAGCATGTAAAGCATACAAGGAGGGCTCTCAGGTAGGC
TCTATGGTCAAAGAAGGAACTCAGGATGTTAATGAACATGAAATGAGTACCTCCCATGAA
TTTAAGGAAGCAGTAGGTAAGATGATGAAGACCCTTGTTACAAACTTTATCAAAAATGGA
TCAAAGGACTGTGAGCAGTTTCAGGTTTCAGCATAG

Peptide Sequence

PEP ID

VIT_12s0028g03630.t01
PEP Infomation

pep chromosome:12X:12:4458443:4466936:1 gene:VIT_12s0028g03630 transcript:VIT_12s0028g03630.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDDYASQSSQSSISKKHKQNEVVLSDGIHIERDEGPTGLSITEEKVVTGGNKGKSKIDC
DETWQNQAQVALANDVRNPTSEAGSEDSPDPLKSFASGSSDLININGFNSDLSYHDDDAI
DDDDDDDVSGYDDNDDFLYDDDYLKLQAQFDNVDIPPGVEASVPWLKDPTPSEKMPAVVD
TSPTPSLQGQCARVGSFSDPGEKETKTAATSSSTVPAQSGDGNQDDVLGKYLFFKQFDTV
EDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVRVYEARMDLLRAVIVGP
AGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCGKVCLSLLNTWNGKKTE
MWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERRSKQYNEDVFILSLKTM
VYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSMVKEGTQDVNEHEMSTSHE
FKEAVGKMMKTLVTNFIKNGSKDCEQFQVSA

Transcript Sequence

Transcript ID

VIT_12s0028g03630.t01
Transcript Infomation

cdna chromosome:12X:12:4458443:4466936:1 gene:VIT_12s0028g03630 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCCCTCTTTCTATTTCACGCTTCCCAGAAATCCGTTGGAAGCTTCAGAGAAGAATTGGG
TAATGTTCAAGACCGTGATCAGTCCTACTAGTTTCTACACCTGAAATTTTCAAGAGGACG
ATTAATCGAAGCCGTTTTTCTTCGATCATGGGTGATGATTACGCATCACAGTCTTCGCAG
AGTTCGATCTCCAAGAAGCACAAACAGAATGAGGTGGTTCTCTCTGATGGAATCCACATT
GAAAGAGATGAAGGTCCAACTGGGTTATCTATTACTGAGGAGAAAGTTGTGACGGGTGGG
AACAAGGGGAAATCAAAAATAGATTGTGATGAGACATGGCAAAACCAAGCTCAGGTTGCT
TTGGCCAATGATGTTCGAAATCCTACCAGTGAAGCAGGATCAGAGGACAGTCCTGATCCT
CTTAAGAGCTTTGCATCAGGATCAAGTGACTTAATCAATATCAATGGTTTCAATTCTGAT
TTGTCCTATCATGATGATGATGCTATTGATGACGACGACGACGATGATGTTTCTGGTTAT
GATGACAATGATGATTTTTTGTATGATGATGATTATTTAAAACTGCAAGCCCAATTTGAT
AATGTAGATATACCTCCTGGAGTAGAGGCATCAGTTCCTTGGTTGAAAGACCCTACTCCG
AGTGAAAAAATGCCAGCTGTTGTGGACACTTCTCCTACTCCAAGTTTGCAAGGGCAATGT
GCTCGTGTAGGATCGTTTTCAGATCCTGGTGAAAAGGAAACAAAGACAGCTGCTACAAGC
AGTTCAACAGTCCCTGCACAGTCTGGGGATGGCAACCAAGATGACGTGCTGGGAAAATAT
CTTTTCTTTAAACAATTTGATACTGTTGAAGATTTTTCAGATCACCACTTTAGCCGAATG
GGCTTTGTAGGAGAGCAGCCACCCAAGAATTGGGCAAAGAAAATTCAGGAAGAGTGGAAG
ATTCTAGAGAGGGACTTACCAGAAACAATTTTTGTAAGAGTTTATGAGGCAAGGATGGAT
CTTTTGAGGGCTGTCATTGTTGGACCAGCAGGCACTCCCTACCATGATGGTCTTTTTGTC
TTTGATGTTCTCTTCCCTCCTAACTATCCTAGCGTACCACCGATGGTTTACTACTATTCT
GGTGGTCTTCGACTAAACCCAAACTTATATGATTGTGGGAAAGTTTGCCTCAGCCTTCTA
AATACTTGGAATGGTAAAAAGACAGAAATGTGGATTCCAGGGAAATCAACCATGTTACAA
GTTTTGGTCTCTATACAAGGTCTGATTCTGAATGCAAAGCCCTTTTTTAATGAGCCTGGG
TATGAAAATATGTATGTTGGGGAAGATGGGGAGAGGAGATCCAAGCAGTATAATGAGGAT
GTGTTTATTCTGTCCTTGAAGACAATGGTGTATACGATTAGGAGGCCCCCAAAGCATTTT
GAGGACTTTGTTGTTGGTCATTTCCGCCAGCGAGCGCATGACATTCTGGTAGCATGTAAA
GCATACAAGGAGGGCTCTCAGGTAGGCTCTATGGTCAAAGAAGGAACTCAGGATGTTAAT
GAACATGAAATGAGTACCTCCCATGAATTTAAGGAAGCAGTAGGTAAGATGATGAAGACC
CTTGTTACAAACTTTATCAAAAATGGATCAAAGGACTGTGAGCAGTTTCAGGTTTCAGCA
TAGAGTAACAGAGCTGTTGTCACAAGCAGTAACCTCCTAAAAGGCCAATTTCTGGGCTAA
CATACGGCAGGTTATGCCTTCGAAGCACCTCTTTTTAATTGCTGTTTTTGATGGAATTAG
TTGGATCAAGGTCTACTGGTTTTCAGTCTATATGTTGTCTTTGAAACCCTAGCTTGATGG
AATTAGTTGGATGGAGGTCTACTGGTTTTCAGTCAATATGTTGTCTTTGAAACCCTAGAT
TGGGTGTAGAATGTAGATATAGCGGCTGTTCCAGGGATGGTGAAAAAAGTTTCTACTGGC
CATAGCTTAATTGCTGTTTTTGGCCAACGGACTTGTGAATCCTGTAATTACTTGGGATAT
AGTTGTCTTACTTTTTCTTTTTCCAAATCTTCTCTTCCTGAATCATATTTGTAAGTATAT
CTACCAATATCATTGCCCTATGCAAAGCTCATCATTCTCACATA