Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03490.t01
CDS Infomation

cds chromosome:12X:12:4282162:4298762:1 gene:VIT_12s0028g03490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATAAAGGCAGTGGCATTTCCTTGCAAAGCATCAATATTGCCTTTTGCAAGGATTGAG
GTGCCTAACCAGGTAAAAGTTAAAGGAGCAAGGATGGAGCTCTCTTTAACTCAACCAGAT
GATTGGCATCTTCATCTACGAGATGGTGACCTTCTTGAAGCTGTTGTCTCTCACAGTGCA
AGTCATTTTGGAAGGGGAATAGTGATGCCAAATCTGAAACCCCCCATTACCACCACTGCT
GCTGCTGTGGCTTATCGGGAATCCATATTGAAAGCACTGCCTGCCAATTGTGACTTCACC
CCTCTTATGACACTATATTTGACCGATAAAACAAGTCCTAACGAGATCAAGCTTGCCAGA
AATAGTGGGGTAGTTTTTGCTGTAAAGTTGTACCCTGCTGGTGCTACAACGAATTCTCAA
GATGGCGTTACGGATCTTTTTGGGAAGTGCCTTCCTGTTCTTGAGGAGATGGTTGAGCAG
AATATGCCTTTACTGGTCCATGGGGAGGTTACAAATCCAGAGGTTGATGTATTTGATCGA
GAAAAAGTTTTCATTGAAACTGTTTTAAGACCTTTGATTCAGAAATTTCCACGGCTGAAG
GTTGTGATGGAGCATATTACAACCATGGATGCTGTTAGGTTTGTTGAGTCTTGCAATGAA
GGATCTGTTGCAGCAACCGTTACACCACAGCATCTTGTTCTGAATAGAAACTCTTTGTTT
CAAGGAGGATTGCAGCCACACAATTACTGTCTTCCAGTACTTAAAAGAGAGACACATAGA
CAGGCTATTGTGTCAGCTGTGACTAGTGGAAGTAGAAAATTTTTCCTTGGAACTGATAGC
GCCCCTCATGAGAGACGACGCAAAGAATGTCCTTGTGGATGTGCTGGTATATACAATGCC
CCTGTTGCCTTGTCACTATATGCCAAGGTGTTCGAAGAGGCAGGTGCACTCGACAAGCTA
GAGGCGTTTACGAGCTTTAACGGACCAGACTTCTATGGGCTTCCAAGAAACACATCAAAG
ATCAAATTGAGCAAGACCCCATGGAAGGTGCCAGAGTCCTACTCATTCTCCTTTGGGGAT
ATTGTTCCAATGTTTGCTGGTGAAACACTCGACTGGCTTCCATCCTCCCCTTGA

Peptide Sequence

PEP ID

VIT_12s0028g03490.t01
PEP Infomation

pep chromosome:12X:12:4282162:4298762:1 gene:VIT_12s0028g03490 transcript:VIT_12s0028g03490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIKAVAFPCKASILPFARIEVPNQVKVKGARMELSLTQPDDWHLHLRDGDLLEAVVSHSA
SHFGRGIVMPNLKPPITTTAAAVAYRESILKALPANCDFTPLMTLYLTDKTSPNEIKLAR
NSGVVFAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLLVHGEVTNPEVDVFDR
EKVFIETVLRPLIQKFPRLKVVMEHITTMDAVRFVESCNEGSVAATVTPQHLVLNRNSLF
QGGLQPHNYCLPVLKRETHRQAIVSAVTSGSRKFFLGTDSAPHERRRKECPCGCAGIYNA
PVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNTSKIKLSKTPWKVPESYSFSFGD
IVPMFAGETLDWLPSSP

Transcript Sequence

Transcript ID

VIT_12s0028g03490.t01
Transcript Infomation

cdna chromosome:12X:12:4282162:4298762:1 gene:VIT_12s0028g03490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCCTAGATCTAGCGTCTGGGTTGTGTCCAGACAGTTGAAGCGTATACCAGATTGTCTCT
CTGGGAAGTATACATCGCTTTGGTGATAAATATTTCATATCCGGGAGAGGCTTTAGGTTT
TCTTGCAGTGCATTTGGAATGATAAAGGCAGTGGCATTTCCTTGCAAAGCATCAATATTG
CCTTTTGCAAGGATTGAGGTGCCTAACCAGGTAAAAGTTAAAGGAGCAAGGATGGAGCTC
TCTTTAACTCAACCAGATGATTGGCATCTTCATCTACGAGATGGTGACCTTCTTGAAGCT
GTTGTCTCTCACAGTGCAAGTCATTTTGGAAGGGGAATAGTGATGCCAAATCTGAAACCC
CCCATTACCACCACTGCTGCTGCTGTGGCTTATCGGGAATCCATATTGAAAGCACTGCCT
GCCAATTGTGACTTCACCCCTCTTATGACACTATATTTGACCGATAAAACAAGTCCTAAC
GAGATCAAGCTTGCCAGAAATAGTGGGGTAGTTTTTGCTGTAAAGTTGTACCCTGCTGGT
GCTACAACGAATTCTCAAGATGGCGTTACGGATCTTTTTGGGAAGTGCCTTCCTGTTCTT
GAGGAGATGGTTGAGCAGAATATGCCTTTACTGGTCCATGGGGAGGTTACAAATCCAGAG
GTTGATGTATTTGATCGAGAAAAAGTTTTCATTGAAACTGTTTTAAGACCTTTGATTCAG
AAATTTCCACGGCTGAAGGTTGTGATGGAGCATATTACAACCATGGATGCTGTTAGGTTT
GTTGAGTCTTGCAATGAAGGATCTGTTGCAGCAACCGTTACACCACAGCATCTTGTTCTG
AATAGAAACTCTTTGTTTCAAGGAGGATTGCAGCCACACAATTACTGTCTTCCAGTACTT
AAAAGAGAGACACATAGACAGGCTATTGTGTCAGCTGTGACTAGTGGAAGTAGAAAATTT
TTCCTTGGAACTGATAGCGCCCCTCATGAGAGACGACGCAAAGAATGTCCTTGTGGATGT
GCTGGTATATACAATGCCCCTGTTGCCTTGTCACTATATGCCAAGGTGTTCGAAGAGGCA
GGTGCACTCGACAAGCTAGAGGCGTTTACGAGCTTTAACGGACCAGACTTCTATGGGCTT
CCAAGAAACACATCAAAGATCAAATTGAGCAAGACCCCATGGAAGGTGCCAGAGTCCTAC
TCATTCTCCTTTGGGGATATTGTTCCAATGTTTGCTGGTGAAACACTCGACTGGCTTCCA
TCCTCCCCTTGATCAGTGCCATTCCATCAGACAAATGAGACAATGGTTGTAAGGTTCTCT
CTTTACCCCTCATGCAATGTCTCCACACCAGAACTAAAACAATGGAGACATTGTTGTCTT
TTAGAATAATTGCTAACAGGGATCCTCATCTTATTTGGCCCTGTTTGGAACCATTCTTGA
AAAGTCAAAAACTCTTTTTTGGAAGTTCAATAAGATTGTTCTTTTCTAAGTTCAATAAAA