Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03480.t01
CDS Infomation

cds chromosome:12X:12:4271790:4277011:1 gene:VIT_12s0028g03480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTACTTGGAGCATGAAAAAGAAGAAGAAGATCAGCCAGTAAGCCCTACTGGACAG
TACTTCAACAGCTCGGTTTTGCAGGTATCTATTATGAGCATTTTGGAATCAGACATTCCG
ATCGATGACTCGCCTACCTTGTCATTGCTCAAGGATGTGTTCCTCCCCATCAACCCTCGT
TTCTCCTCACTCATGGTTGAAGACAAAAAAGGAGTGAAACATTGGAAGAGGGTAGAAGTG
AAGCTTGAAGACCATGTTAACGTTCCCATTTTTCCAGACGGGTTATCACCGGAGTCCTAT
GATGACTATTTCGATGACTATCTAACGAAAATTGCCATGAAAGAGTTTCCACAGAGCAGA
CCTTTATGGGAAATTCATATTATAAAGTACCCAACAAGCAATGCAGCTGGAACTGTGGTA
TTCAAGCTTCATCATGCATTGGGGGATGGCTTCTCTCTTATGGGGGCTCTTCTTTCTTGT
CTGCAAAGAGCTGATAACCCTAATCTCCCCATAACATTCCCTTCATTTAAGGTGAGCTCC
AACTTGGACAGTGGGAGAAGCATTATTAGGGCAGTGCCAAGAGCTCTTTCTGCAGCCTTC
AACACCGTATCAGATTTTGGATGGGGTCTTTTGAAGAGTACAGCGGTGGAAGATGATCGA
ACACCGATCCGATCCGGTGATCCGGGGGTGGAGTTTCGACCCATGTCCATAGCAACCATC
TCTTTCTCTCTTGATAACATCCAAAAAATCAAGGCGAAGCTTGGAGTGACAATAAACGAT
GTCCTCACTGGAATAATCTTCTTTGGCACTCGACTATACATGCAATCAATGAACCATGCA
TCAAGAAATGCCAATTCTACTGCACTGGTGTTGCTCAACACCAGGGTGATTAGTGGGTAC
AAATCGATAAAGGAGATGACAGCATCTGATAGCAGCTCACAATGGGGAAACCAGTTCGCC
TTCTTACATGTTACACTACCTGAGTTGGCCGATGCCAAGTTCACAAGCCCACTTGATTTT
GTGGCAAAAGCTCAACAAACCATCCAGAGGAAAAGAAACTCTTTAGCCGTTCACCTCACT
GGTAGGCTACTAGAGACTTTGCGGAAATATAGAGGCCCTGAGGTCACAGCTAGGTACATC
CACGGCACCCTAAAGAACTCAAGCATGACCATCTCAAATATGATTGGACCCATGGAACAA
CTGGCTCTAGCTAATCATCCGTGTCGGGGAATATATTTCATGGTGCTAGGCTCTCCAGAG
AGTATGACCATATCAATCTTAAGCTACATGGGAAAGGTTCGAATCGCCGTGGGAACGGAG
AAAGGCTTCATCGATCCCCGAAAATTCAATGCATGCATAGAGAATGCTTTCCAGAGAGTT
TTTGAAGCTGCCGTGGGAACTCCTCCCCCTCCAATGTCATGA

Peptide Sequence

PEP ID

VIT_12s0028g03480.t01
PEP Infomation

pep chromosome:12X:12:4271790:4277011:1 gene:VIT_12s0028g03480 transcript:VIT_12s0028g03480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEYLEHEKEEEDQPVSPTGQYFNSSVLQVSIMSILESDIPIDDSPTLSLLKDVFLPINPR
FSSLMVEDKKGVKHWKRVEVKLEDHVNVPIFPDGLSPESYDDYFDDYLTKIAMKEFPQSR
PLWEIHIIKYPTSNAAGTVVFKLHHALGDGFSLMGALLSCLQRADNPNLPITFPSFKVSS
NLDSGRSIIRAVPRALSAAFNTVSDFGWGLLKSTAVEDDRTPIRSGDPGVEFRPMSIATI
SFSLDNIQKIKAKLGVTINDVLTGIIFFGTRLYMQSMNHASRNANSTALVLLNTRVISGY
KSIKEMTASDSSSQWGNQFAFLHVTLPELADAKFTSPLDFVAKAQQTIQRKRNSLAVHLT
GRLLETLRKYRGPEVTARYIHGTLKNSSMTISNMIGPMEQLALANHPCRGIYFMVLGSPE
SMTISILSYMGKVRIAVGTEKGFIDPRKFNACIENAFQRVFEAAVGTPPPPMS

Transcript Sequence

Transcript ID

VIT_12s0028g03480.t01
Transcript Infomation

cdna chromosome:12X:12:4271790:4277011:1 gene:VIT_12s0028g03480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGGGGCATTGTATCAAGGTAGCGCAAGAGAGCTAAAATGGAGTACTTGGAGCATGAAAA
AGAAGAAGAAGATCAGCCAGTAAGCCCTACTGGACAGTACTTCAACAGCTCGGTTTTGCA
GGTATCTATTATGAGCATTTTGGAATCAGACATTCCGATCGATGACTCGCCTACCTTGTC
ATTGCTCAAGGATGTGTTCCTCCCCATCAACCCTCGTTTCTCCTCACTCATGGTTGAAGA
CAAAAAAGGAGTGAAACATTGGAAGAGGGTAGAAGTGAAGCTTGAAGACCATGTTAACGT
TCCCATTTTTCCAGACGGGTTATCACCGGAGTCCTATGATGACTATTTCGATGACTATCT
AACGAAAATTGCCATGAAAGAGTTTCCACAGAGCAGACCTTTATGGGAAATTCATATTAT
AAAGTACCCAACAAGCAATGCAGCTGGAACTGTGGTATTCAAGCTTCATCATGCATTGGG
GGATGGCTTCTCTCTTATGGGGGCTCTTCTTTCTTGTCTGCAAAGAGCTGATAACCCTAA
TCTCCCCATAACATTCCCTTCATTTAAGGTGAGCTCCAACTTGGACAGTGGGAGAAGCAT
TATTAGGGCAGTGCCAAGAGCTCTTTCTGCAGCCTTCAACACCGTATCAGATTTTGGATG
GGGTCTTTTGAAGAGTACAGCGGTGGAAGATGATCGAACACCGATCCGATCCGGTGATCC
GGGGGTGGAGTTTCGACCCATGTCCATAGCAACCATCTCTTTCTCTCTTGATAACATCCA
AAAAATCAAGGCGAAGCTTGGAGTGACAATAAACGATGTCCTCACTGGAATAATCTTCTT
TGGCACTCGACTATACATGCAATCAATGAACCATGCATCAAGAAATGCCAATTCTACTGC
ACTGGTGTTGCTCAACACCAGGGTGATTAGTGGGTACAAATCGATAAAGGAGATGACAGC
ATCTGATAGCAGCTCACAATGGGGAAACCAGTTCGCCTTCTTACATGTTACACTACCTGA
GTTGGCCGATGCCAAGTTCACAAGCCCACTTGATTTTGTGGCAAAAGCTCAACAAACCAT
CCAGAGGAAAAGAAACTCTTTAGCCGTTCACCTCACTGGTAGGCTACTAGAGACTTTGCG
GAAATATAGAGGCCCTGAGGTCACAGCTAGGTACATCCACGGCACCCTAAAGAACTCAAG
CATGACCATCTCAAATATGATTGGACCCATGGAACAACTGGCTCTAGCTAATCATCCGTG
TCGGGGAATATATTTCATGGTGCTAGGCTCTCCAGAGAGTATGACCATATCAATCTTAAG
CTACATGGGAAAGGTTCGAATCGCCGTGGGAACGGAGAAAGGCTTCATCGATCCCCGAAA
ATTCAATGCATGCATAGAGAATGCTTTCCAGAGAGTTTTTGAAGCTGCCGTGGGAACTCC
TCCCCCTCCAATGTCATGATTCAAGGATTCTGTGTTCATGGTTGTCATATTTCTTCATAA
CAGAAGTTGTTGTGTCGATTGTTGTGTGGTAGCATACTCATTTTTTTGGCCATGAAACAA
CTAGTCCATCCACCATAGTCTTTAATTAATATTGAAGAAGATTGTTTCCAAGGATGACCG
GTTTGAAACCGTTTGGGAGTTGTTCAAATGTTCATGATAATTATGATAATGATAACAATT
GTTTGAGTTGCTTTGCATTAAGTGCTTTTTCTTTTTACTTATTTAGGCGATGTTTGAATA
TGCTTCTTAAAAAGCAGACCCTTAAGTTATGTTTGGTTCCAGAGGAAAAAAAAAATGTTA
AGAAAAATGATTTATTACATTTTCTTTCCTTTTACTTTTCCTCTTTATTTTCTTTTCTTC
ACATTTTTCCTCAAATTTTTCGAGAACCAAACATAGCATTAAGGAAAATTCATATTGTCA
AGTACCCAACAAGCAATGCAGCTGAAAATTTGGTATTCAAGCTTCGTCA