Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03410.t01
CDS Infomation

cds chromosome:12X:12:4186053:4209365:-1 gene:VIT_12s0028g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCACCGGCGGAAATGCGGAATTTGGGTGGTTTGGGAGGAGGGGGAGGCTAGGGTTT
GCGTTTCGGGTGGTTTTGGGGTTGTGGGTCGTGTTGGCCGTTCTTCGGCCGGTGACGGGT
CTGAGACCTTTAAGGGACAGGGCTCATTCGTGGGGCGATGAGTGGTTATATATTAGAAAA
GATGAGAATGCACTGGGTCCGTTTTCCTATTGGAACATTACAGGAACATACAAAGGATCT
TGGAGGTTCCTGGATTCCACAAATAGCTCTGCTAGGTTTCCAGATTTTGGGAAATCCAGT
GGCAATTCTATCATTGAATTAGTTAGCTCACCAACAAAAATAACAGGTGTACATTATGTT
CAGGGGGTGATTATATTCCATGATGTGTTTGACAATGAACATGAAGTTGGTGGTTCTCAA
ATCAGGGTAGAAGGTGTATATATATGGCCTTTTAGACAACTTCGAATGGTAGCCAACAGT
GGAAAAGAGGGAGAGTTGAGCCAGGAAGAAGAATATATATTGTCTAATCCATATCACTTG
CTTGGAGTTTTCTCGTCACAGGTGTTCCAAGAATCTCCCCGAGAGAAGATATGGAGAAAG
CGGCATTCACCAATTTATGAGATGGAGAAACGTTGTAATATTGAAATTGCGGCCCAAATT
TCACGTGTCTCATCCACCCAAAATGATGGAGATCGTGATCGTTATCACTTAGAAGGATTG
ATGGAGAGTCCTTCCGTGGATGATGATGGAGATTGCTTCTCTCCCTTACTATTAAATGCT
ACTTCTGTCAACATTGAGGCCTACTACAACAAGGCAGTTAACTATACGTTGATGGTCACC
TTTGTCTCTTTTCTTCAAGTTCTTTTGTTAATTCGGCAAATGGAACATAGCAACACTCAA
TCGGGGGCTGCCAAAGTTTCGATTTTAATGATTGGGCAACAAGCCATTATGGATGCTTAT
CTCTGCCTTTTACATCTGACTGCCGGAATACTAGTTGAGTCCTTGTTCAATGCTTTTGCA
ACTGCTGCATTTTTCAAGTTTGTAGTCTTCTCAATTTTTGAGATGAGATACCTTCTTGCC
ATATGGAAGGCAAGCAGACCTATGAATAACGGAGAAGGTTGGGAGACAATGAGGCGTGAG
CTTTCTGTTCTGTATAGCCGTTTCTATGGAATCCTTTTGGGAGGCATTCTGGTTATGTAT
GAGTTTCATAATTTTCTGCGGCCTATTCTTCTCCTTATGTACTCCTTTTGGATACCTCAA
ATAATTACTAATGTTATTCGTGATTCAAGAAAGCCATTGCATCCTCATTATATCTTAGGC
ATGACTGTTACTCGGCTAGCAGTTCCATTATATATGTTTGGCTGCCCTAACAACTTCATG
CGCATTGAACCTAGCAAGAGTTGGTGTATTTGTTTGGGTATATTTATGGGACTTCAAGCA
TCAATTCTTCTTCTTCAGCACTATCTTGGATCTCGGTGTTTCATTCCTCGGCAGATCCTA
CCTGAGAAATATAGCTACTACAGACGGTCTAATCAGGATACAAATCATGTGACGGACTGT
GTCATTTGCATGACCACCATTGATATCACACATCGTTCTAATGAGTGCATGGTGACGCCA
TGTGATCATTTTTTCCATTCTGGTTGTTTACAAAGGTGGATGGATATAAAAATGGAATGC
CCAACATGCCGGCGTCCACTGCCACCAGCCTAA

Peptide Sequence

PEP ID

VIT_12s0028g03410.t01
PEP Infomation

pep chromosome:12X:12:4186053:4209365:-1 gene:VIT_12s0028g03410 transcript:VIT_12s0028g03410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTGGNAEFGWFGRRGRLGFAFRVVLGLWVVLAVLRPVTGLRPLRDRAHSWGDEWLYIRK
DENALGPFSYWNITGTYKGSWRFLDSTNSSARFPDFGKSSGNSIIELVSSPTKITGVHYV
QGVIIFHDVFDNEHEVGGSQIRVEGVYIWPFRQLRMVANSGKEGELSQEEEYILSNPYHL
LGVFSSQVFQESPREKIWRKRHSPIYEMEKRCNIEIAAQISRVSSTQNDGDRDRYHLEGL
MESPSVDDDGDCFSPLLLNATSVNIEAYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQ
SGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLA
IWKASRPMNNGEGWETMRRELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQ
IITNVIRDSRKPLHPHYILGMTVTRLAVPLYMFGCPNNFMRIEPSKSWCICLGIFMGLQA
SILLLQHYLGSRCFIPRQILPEKYSYYRRSNQDTNHVTDCVICMTTIDITHRSNECMVTP
CDHFFHSGCLQRWMDIKMECPTCRRPLPPA

Transcript Sequence

Transcript ID

VIT_12s0028g03410.t01
Transcript Infomation

cdna chromosome:12X:12:4186053:4209365:-1 gene:VIT_12s0028g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTATCGGGGTTGACTTGTGGGGTGGAGTGCGGGGGTTGTGATATGGGCACCGGCGGAAA
TGCGGAATTTGGGTGGTTTGGGAGGAGGGGGAGGCTAGGGTTTGCGTTTCGGGTGGTTTT
GGGGTTGTGGGTCGTGTTGGCCGTTCTTCGGCCGGTGACGGGTCTGAGACCTTTAAGGGA
CAGGGCTCATTCGTGGGGCGATGAGTGGTTATATATTAGAAAAGATGAGAATGCACTGGG
TCCGTTTTCCTATTGGAACATTACAGGAACATACAAAGGATCTTGGAGGTTCCTGGATTC
CACAAATAGCTCTGCTAGGTTTCCAGATTTTGGGAAATCCAGTGGCAATTCTATCATTGA
ATTAGTTAGCTCACCAACAAAAATAACAGGTGTACATTATGTTCAGGGGGTGATTATATT
CCATGATGTGTTTGACAATGAACATGAAGTTGGTGGTTCTCAAATCAGGGTAGAAGGTGT
ATATATATGGCCTTTTAGACAACTTCGAATGGTAGCCAACAGTGGAAAAGAGGGAGAGTT
GAGCCAGGAAGAAGAATATATATTGTCTAATCCATATCACTTGCTTGGAGTTTTCTCGTC
ACAGGTGTTCCAAGAATCTCCCCGAGAGAAGATATGGAGAAAGCGGCATTCACCAATTTA
TGAGATGGAGAAACGTTGTAATATTGAAATTGCGGCCCAAATTTCACGTGTCTCATCCAC
CCAAAATGATGGAGATCGTGATCGTTATCACTTAGAAGGATTGATGGAGAGTCCTTCCGT
GGATGATGATGGAGATTGCTTCTCTCCCTTACTATTAAATGCTACTTCTGTCAACATTGA
GGCCTACTACAACAAGGCAGTTAACTATACGTTGATGGTCACCTTTGTCTCTTTTCTTCA
AGTTCTTTTGTTAATTCGGCAAATGGAACATAGCAACACTCAATCGGGGGCTGCCAAAGT
TTCGATTTTAATGATTGGGCAACAAGCCATTATGGATGCTTATCTCTGCCTTTTACATCT
GACTGCCGGAATACTAGTTGAGTCCTTGTTCAATGCTTTTGCAACTGCTGCATTTTTCAA
GTTTGTAGTCTTCTCAATTTTTGAGATGAGATACCTTCTTGCCATATGGAAGGCAAGCAG
ACCTATGAATAACGGAGAAGGTTGGGAGACAATGAGGCGTGAGCTTTCTGTTCTGTATAG
CCGTTTCTATGGAATCCTTTTGGGAGGCATTCTGGTTATGTATGAGTTTCATAATTTTCT
GCGGCCTATTCTTCTCCTTATGTACTCCTTTTGGATACCTCAAATAATTACTAATGTTAT
TCGTGATTCAAGAAAGCCATTGCATCCTCATTATATCTTAGGCATGACTGTTACTCGGCT
AGCAGTTCCATTATATATGTTTGGCTGCCCTAACAACTTCATGCGCATTGAACCTAGCAA
GAGTTGGTGTATTTGTTTGGGTATATTTATGGGACTTCAAGCATCAATTCTTCTTCTTCA
GCACTATCTTGGATCTCGGTGTTTCATTCCTCGGCAGATCCTACCTGAGAAATATAGCTA
CTACAGACGGTCTAATCAGGATACAAATCATGTGACGGACTGTGTCATTTGCATGACCAC
CATTGATATCACACATCGTTCTAATGAGTGCATGGTGACGCCATGTGATCATTTTTTCCA
TTCTGGTTGTTTACAAAGGTGGATGGATATAAAAATGGAATGCCCAACATGCCGGCGTCC
ACTGCCACCAGCCTAACAAGGTCCTGCTTTGTATTTATTCTGTTTAGGATCAACAGACAT
CACCCAACCACCCATTAATTGTGATGAGCGAAAACCGACATCCCCTGAAGATGGCTGGGA
TGCAGCATAATCAATTCAGAACAGATTGGGGCTACATTTTGCTGCCAACATAATTCTTGT
ATTGTTTGTATATGTGTATTTTAGTGCATTTAGCATTTTGATGGGCACTTCTTTCTGGCT
TCAACATTTATTGTTTCTTGAAACTAGATTAACTAAAAGGATTAGCACATACACATACAT
TTGCAGAAACCAGATTGTTGCCAAGAACAAGAGAAATGAA