Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03380.t01
CDS Infomation

cds chromosome:12X:12:4173608:4177025:1 gene:VIT_12s0028g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGATGGATCACAGCATTCGTCAATATTTCAGAAAATAAATGGGCAGTCTTATCTC
TTTTCTACATTGTCGCCTAATTTGCAGTCCAGAAATACCAGTGTACACAGTCTGAGCAGT
GCCTATGTGAATGGAGGTTTGCAGACTTCTTTGCTGCCAGCAGGCAGTGGCAATGGCCTG
GCCCTTGTATCACCCTTGTCTCCCATCTTTGCTCATGCTCCTGCGGAGAAAGGTGCAAAA
GGTTTTATGATTGATTTCCTCATGGGAGGAGTTTCTGCTGCAGTCTCCAAGTCAGCTGCT
GCACCAATTGAGCGAGTTAAGCTCTTGATTCAGAATCAGGATGAGATGATTAAGGCTGGC
AGGTTGTCTGAACCATACAAGGGAATTACTGACTGCTTTGCCAGAACTATTAAGGATGAA
GGTGTCATTTCCCTTTGGAGAGGCAACACTGCTAATGTTATTAGATATTTCCCCACTCAG
GCCCTGAACTTCGCTTTCAAGGATTACTTCAAGAGACTCTTCAACTTCAAGAAAGACAGG
GATGGCTACTGGAAATGGTTTGCTGGGAACTTGGCATCAGGTGGTGCTGCTGGTGCTTCT
TCTCTTCTATTTGTTTATTCCCTAGATTATGCCCGTACACGTTTGGCCAATGATGCTAAG
GCTGCTAAAAAGGGTGGTGAAAGGCAATTTAATGGTTTGATTGATGTGTACAAGAAAACC
ATCAAATCTGATGGCATTGCGGGGCTTTATCGTGGATTCAACATCTCATGTGTTGGAATT
ATAGTGTACCGTGGGCTCTATTTTGGAATGTATGATTCACTGAAACCTGTGGTCCTGGTT
GGTGAGATGCAGGATAGTTTCTTGGCTAGTTTCTTGCTGGGATGGGGAATCACAATTGGT
GCAGGATTGGCTTCTTACCCAATTGATACAGTGCGTAGAAGGATGATGATGACCTCAGGA
GAAGCTGTCAAATACAAGAGCTCTTTCGATGCATTCTCACAGATCCTGAAGAATGAAGGT
GCTAAATCACTCTTTAAAGGCGCCGGTGCAAACATCCTGCGTGCTGTTGCAGGTGCTGGT
GTGCTTGCTGGTTATGATAAGTTGCAGCTCCTTGTACTTGGCAAGAAATATGGATCCGGT
GGTGGCGGCTAA

Peptide Sequence

PEP ID

VIT_12s0028g03380.t01
PEP Infomation

pep chromosome:12X:12:4173608:4177025:1 gene:VIT_12s0028g03380 transcript:VIT_12s0028g03380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADGSQHSSIFQKINGQSYLFSTLSPNLQSRNTSVHSLSSAYVNGGLQTSLLPAGSGNGL
ALVSPLSPIFAHAPAEKGAKGFMIDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAG
RLSEPYKGITDCFARTIKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR
DGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT
IKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGEMQDSFLASFLLGWGITIG
AGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQILKNEGAKSLFKGAGANILRAVAGAG
VLAGYDKLQLLVLGKKYGSGGGG

Transcript Sequence

Transcript ID

VIT_12s0028g03380.t01
Transcript Infomation

cdna chromosome:12X:12:4173608:4177025:1 gene:VIT_12s0028g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAGAAGAGTGAGCGGTGGTCTCTCTCGGCGACCTTCACGGGTTAAGGTCACTGTTCTT
AGTTTCAAACATGGCGGATGGATCACAGCATTCGTCAATATTTCAGAAAATAAATGGGCA
GTCTTATCTCTTTTCTACATTGTCGCCTAATTTGCAGTCCAGAAATACCAGTGTACACAG
TCTGAGCAGTGCCTATGTGAATGGAGGTTTGCAGACTTCTTTGCTGCCAGCAGGCAGTGG
CAATGGCCTGGCCCTTGTATCACCCTTGTCTCCCATCTTTGCTCATGCTCCTGCGGAGAA
AGGTGCAAAAGGTTTTATGATTGATTTCCTCATGGGAGGAGTTTCTGCTGCAGTCTCCAA
GTCAGCTGCTGCACCAATTGAGCGAGTTAAGCTCTTGATTCAGAATCAGGATGAGATGAT
TAAGGCTGGCAGGTTGTCTGAACCATACAAGGGAATTACTGACTGCTTTGCCAGAACTAT
TAAGGATGAAGGTGTCATTTCCCTTTGGAGAGGCAACACTGCTAATGTTATTAGATATTT
CCCCACTCAGGCCCTGAACTTCGCTTTCAAGGATTACTTCAAGAGACTCTTCAACTTCAA
GAAAGACAGGGATGGCTACTGGAAATGGTTTGCTGGGAACTTGGCATCAGGTGGTGCTGC
TGGTGCTTCTTCTCTTCTATTTGTTTATTCCCTAGATTATGCCCGTACACGTTTGGCCAA
TGATGCTAAGGCTGCTAAAAAGGGTGGTGAAAGGCAATTTAATGGTTTGATTGATGTGTA
CAAGAAAACCATCAAATCTGATGGCATTGCGGGGCTTTATCGTGGATTCAACATCTCATG
TGTTGGAATTATAGTGTACCGTGGGCTCTATTTTGGAATGTATGATTCACTGAAACCTGT
GGTCCTGGTTGGTGAGATGCAGGATAGTTTCTTGGCTAGTTTCTTGCTGGGATGGGGAAT
CACAATTGGTGCAGGATTGGCTTCTTACCCAATTGATACAGTGCGTAGAAGGATGATGAT
GACCTCAGGAGAAGCTGTCAAATACAAGAGCTCTTTCGATGCATTCTCACAGATCCTGAA
GAATGAAGGTGCTAAATCACTCTTTAAAGGCGCCGGTGCAAACATCCTGCGTGCTGTTGC
AGGTGCTGGTGTGCTTGCTGGTTATGATAAGTTGCAGCTCCTTGTACTTGGCAAGAAATA
TGGATCCGGTGGTGGCGGCTAAGGTGACTACAGTTGTTGGTTATGGTTGATGATGACGAT
GGAGTGTGATGAATGTTTAGGTTCTCTTTCCTTTCAAGTCTCAATAATTTTGGTGGAACA
CACAGAGTCTCTTATATTTTCCCGGTACTGGCGAATTGATATTAGCATTTATAGTTCCAA
AACTCCTATTTCAATTTTTAACTGTTATCTGTGCTTGAACTTGAAGGTGTTGTTGATCTT
AATGGTTCTTTTGGTGAGAGAATAGTTAAAGGAGTTTACCCACAACTATTTAGTCTGTGA
TGTATTGGT