Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03340.t01
CDS Infomation

cds chromosome:12X:12:4097683:4105274:-1 gene:VIT_12s0028g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCTTGAAGGACACAAGGCCGTCCACCAAGCCCACATGTGCTTTTCTTTCTCCTTCC
CTCTCTCGCTCTCTCCCAAACCCCACCATCACCACCCCCAACACCACCACCACCACGGCC
GACGTCGACGGGGATCATAGGAGCCGCCACGACAAAGCTCTCTTCTCACCAATGCCTGCC
CAGAAGCGTTCCGTCTCCGAAAATCTGGTCAGCGGCGGAGTCGACGACGACGACGAGGAG
GAAAGAGACGAAGATTCTCTCCACCAACACTTCCATCGGAAGCAGCCGCGGCACGTCGAA
CCAGACCAAGTTCAGCCCCAAGATCACCACCACCAACACCCACAGCTCCACCAAGAAGAG
GATTCCGATGAAAACCCTTCCTCTAGCACTGAAGAAAAACCAGAATTTGTCTTTGTAGGA
CTGCCAGACATTCGTAAAGATGTACAATGTCCAATATGTCTTGGGATCATTAAGAAAACA
CGTACTGTAATGGAATGCTTGCACCGGTTTTGCAGGGAATGCATTGACAAATCAATGAGA
CTGGGGAATAATGAGTGTCCTGCTTGCCGCACACATTGTGCCAGCCGACGTTCCCTGAGA
GATGATCCAAACTATGATGCCCTAATTGCAGCTTTATATCCAGATATTGATAAGTATGAA
GAGGAGGAACTGGCTTTTCATGAAGAGGAGCAGACTCGCAATAAGCAGATTCAAGCATCA
ATTGCTCAAATTCTTCAAAGACAATCAGAAGCGCTAAATAGGAAACGCACACTGGGTAAA
GATATAGCAGGTCCATTTATGACAAGATCACAGCGCAATTATCGGAATGCTTATTCAAGG
AGGAGGAAAAATGGTCGAGGTTCTGATCTTCAAGGATCTGATGATAATGAGGATGAGAAT
GATAATGATGGAGGCAAAGGTTCATCTTCTGCTGAGGAGCGTTCTACAGAAGTCAAGCGG
AGAAGGTACAAGAGACGGGCAGGAATTCGACTCATACAACCTTCTTCTTCTTCAGTAGCT
AACTCAGATGGTGGATGCATTGAAAATGATTTAGAAGTGAATAGAGAAAGCCGAGGCTTT
TCTCCTGGACTAGTGTGGAATCCTGAAATGCTTGCTTGGGGCAGGGGTGGTGCTCGGAGT
CATACACGACATGGCAGTAGCAGTGGCTGCAATCATAAGAGTGCCCGGAGTACCCGCCTG
TCCAAGTTGGTTGATTATCTTCGGAGCTTAGGGGAAAATGATAATGAGTTAGATGTTCAT
CTCATGCTTATTTCTTTGGATAAAGAAAGTACACCAAGTTTGCAGGAGCCATATCTTTGC
TGCAGGCCAACCTTGTCAGTGAGACACCTCTGTGAATATGTTGCTCTCCAGACACCTTTG
CGTGCGGAAGAAGTTGAAATATTGGTGGTGAAAGGGTGTCACAATGACTATCAGCCCTTC
CCAAACCCTTCAACCTCAGTAGATGATCTGAATCCCGACCCTATAGTGATTGATCCATCC
AAAGATGAGCTGCAAATTTTGGAGGGGCAAGAAACTCTGGTGGGGCTTCAAGCCAATGGC
ACTTCCTGTAGAAACCAGTTGGTCCTAGCATATCGGCAGAAGGGGGATAGTTAG

Peptide Sequence

PEP ID

VIT_12s0028g03340.t01
PEP Infomation

pep chromosome:12X:12:4097683:4105274:-1 gene:VIT_12s0028g03340 transcript:VIT_12s0028g03340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPLKDTRPSTKPTCAFLSPSLSRSLPNPTITTPNTTTTTADVDGDHRSRHDKALFSPMPA
QKRSVSENLVSGGVDDDDEEERDEDSLHQHFHRKQPRHVEPDQVQPQDHHHQHPQLHQEE
DSDENPSSSTEEKPEFVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR
LGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQAS
IAQILQRQSEALNRKRTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSDDNEDEN
DNDGGKGSSSAEERSTEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLEVNRESRGF
SPGLVWNPEMLAWGRGGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGENDNELDVH
LMLISLDKESTPSLQEPYLCCRPTLSVRHLCEYVALQTPLRAEEVEILVVKGCHNDYQPF
PNPSTSVDDLNPDPIVIDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYRQKGDS

Transcript Sequence

Transcript ID

VIT_12s0028g03340.t01
Transcript Infomation

cdna chromosome:12X:12:4097683:4105274:-1 gene:VIT_12s0028g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCTTGAAGGACACAAGGCCGTCCACCAAGCCCACATGTGCTTTTCTTTCTCCTTCC
CTCTCTCGCTCTCTCCCAAACCCCACCATCACCACCCCCAACACCACCACCACCACGGCC
GACGTCGACGGGGATCATAGGAGCCGCCACGACAAAGCTCTCTTCTCACCAATGCCTGCC
CAGAAGCGTTCCGTCTCCGAAAATCTGGTCAGCGGCGGAGTCGACGACGACGACGAGGAG
GAAAGAGACGAAGATTCTCTCCACCAACACTTCCATCGGAAGCAGCCGCGGCACGTCGAA
CCAGACCAAGTTCAGCCCCAAGATCACCACCACCAACACCCACAGCTCCACCAAGAAGAG
GATTCCGATGAAAACCCTTCCTCTAGCACTGAAGAAAAACCAGAATTTGTCTTTGTAGGA
CTGCCAGACATTCGTAAAGATGTACAATGTCCAATATGTCTTGGGATCATTAAGAAAACA
CGTACTGTAATGGAATGCTTGCACCGGTTTTGCAGGGAATGCATTGACAAATCAATGAGA
CTGGGGAATAATGAGTGTCCTGCTTGCCGCACACATTGTGCCAGCCGACGTTCCCTGAGA
GATGATCCAAACTATGATGCCCTAATTGCAGCTTTATATCCAGATATTGATAAGTATGAA
GAGGAGGAACTGGCTTTTCATGAAGAGGAGCAGACTCGCAATAAGCAGATTCAAGCATCA
ATTGCTCAAATTCTTCAAAGACAATCAGAAGCGCTAAATAGGAAACGCACACTGGGTAAA
GATATAGCAGGTCCATTTATGACAAGATCACAGCGCAATTATCGGAATGCTTATTCAAGG
AGGAGGAAAAATGGTCGAGGTTCTGATCTTCAAGGATCTGATGATAATGAGGATGAGAAT
GATAATGATGGAGGCAAAGGTTCATCTTCTGCTGAGGAGCGTTCTACAGAAGTCAAGCGG
AGAAGGTACAAGAGACGGGCAGGAATTCGACTCATACAACCTTCTTCTTCTTCAGTAGCT
AACTCAGATGGTGGATGCATTGAAAATGATTTAGAAGTGAATAGAGAAAGCCGAGGCTTT
TCTCCTGGACTAGTGTGGAATCCTGAAATGCTTGCTTGGGGCAGGGGTGGTGCTCGGAGT
CATACACGACATGGCAGTAGCAGTGGCTGCAATCATAAGAGTGCCCGGAGTACCCGCCTG
TCCAAGTTGGTTGATTATCTTCGGAGCTTAGGGGAAAATGATAATGAGTTAGATGTTCAT
CTCATGCTTATTTCTTTGGATAAAGAAAGTACACCAAGTTTGCAGGAGCCATATCTTTGC
TGCAGGCCAACCTTGTCAGTGAGACACCTCTGTGAATATGTTGCTCTCCAGACACCTTTG
CGTGCGGAAGAAGTTGAAATATTGGTGGTGAAAGGGTGTCACAATGACTATCAGCCCTTC
CCAAACCCTTCAACCTCAGTAGATGATCTGAATCCCGACCCTATAGTGATTGATCCATCC
AAAGATGAGCTGCAAATTTTGGAGGGGCAAGAAACTCTGGTGGGGCTTCAAGCCAATGGC
ACTTCCTGTAGAAACCAGTTGGTCCTAGCATATCGGCAGAAGGGGGATAGTTAGCCATCA
TCCATAATGTTACTTGTCTCATTCATCGAAAATCCAACAAACCGGCTATCTCATTATATG
GCGGTGGGAATTATAGAGGGCGCTGCATATGTTACAGATGTACATTATACTTAAAACAGG
GATGACATGAACATTGAAGCCTCTTTTTA