Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03300.t01
CDS Infomation

cds chromosome:12X:12:4070970:4072423:-1 gene:VIT_12s0028g03300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTGGGGTTTCTGCTGACCAACACAAGTTTTTCCTCTCCCACCAACTCTTCAACAAG
AAAACCATTGATATTCCGCCCAGAAAGCTTCTCAGCCGCCGAGCCAACTCTCTTGAGAGC
TCTGATATCTTCTCCGACTCCCCCAAGGCTCTCGGTGCGGCTGGAGAGACCCTCTTTCAG
AAGTTCTTGCCGTTCAACTGCGGCGACGACGATGAGTCCGACCCTTATTCGTCAGATCAT
TTTCGGATGTTTGAGTTTAAGGTTCGCCGGTGCACTCGCAGCCGCAGCCACGACTGGACT
GATTGTCCCTTTGCTCATCCCGGGGAGAAGGCTCGCAGGAGGGACCCCCGGAGGTACCAT
TACTCAGGGACTGTGTGCTCGGAGTACCGGCGAGGTGGGTGTAGTAGAGGCGATAACTGC
GAGTTTTCACATGGGGTTTTCGAGTGCTGGCTACACCCAGCTCGTTACAGGACTGAGGCC
TGCAAAGATGGAAAGAATTGTAAGAGAAAGGTCTGTTTCTTCGCTCATTCCCGTAAGCAG
CTTCGGGTATTGCCTTTGCATTCACAAACCAATGGAACCCCAGATGTAAAGTTCTCGCCT
CTGAACCATTGCTGCGTGTTTTGCCACTCTGCAACTTCTCCCACTTCTACCTTAATGGGT
ACGTCCCATTTTTCGCCGCCGGCGTCGCCGTCTCCCCCTCTGTCTCCGGTGAACGCCACA
TATTCTCCAATTTCTCGTTACAATGATCGCTCAACAAGCCTAGATTCGAGTAATATGAGC
CAATTTCGACATGTAATGTTGAGCTACAACAAGGACGTTGTTGCGGAGCTGATGAGCTCT
TTGGAAGCCATAAACATCAACGAAGCTTCACCCGAACATACCAACCCATTGGTCGACTCT
TGTTTCGCCAGTGAAGATCATCAGCAGTTTAGTCTCTCTCCATCAATCCCAAATGCTTCT
GGGTCCAGGCATTTTTTCAATGGAGACTGTTCGAGCAAAAGCTCCATTGAGGATAAGCTC
AGTAGTGAAAATGGCAGCTGGGCTTGTCCTGATCTTGGGTGGGTCAACGATCTGTTGATG
TAG

Peptide Sequence

PEP ID

VIT_12s0028g03300.t01
PEP Infomation

pep chromosome:12X:12:4070970:4072423:-1 gene:VIT_12s0028g03300 transcript:VIT_12s0028g03300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGVSADQHKFFLSHQLFNKKTIDIPPRKLLSRRANSLESSDIFSDSPKALGAAGETLFQ
KFLPFNCGDDDESDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYH
YSGTVCSEYRRGGCSRGDNCEFSHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSRKQ
LRVLPLHSQTNGTPDVKFSPLNHCCVFCHSATSPTSTLMGTSHFSPPASPSPPLSPVNAT
YSPISRYNDRSTSLDSSNMSQFRHVMLSYNKDVVAELMSSLEAININEASPEHTNPLVDS
CFASEDHQQFSLSPSIPNASGSRHFFNGDCSSKSSIEDKLSSENGSWACPDLGWVNDLLM

Transcript Sequence

Transcript ID

VIT_12s0028g03300.t01
Transcript Infomation

cdna chromosome:12X:12:4070970:4072423:-1 gene:VIT_12s0028g03300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAACATGAGTGGGGTTTCTGCTGACCAACACAAGTTTTTCCTCTCCCACCAACTCTTCAA
CAAGAAAACCATTGATATTCCGCCCAGAAAGCTTCTCAGCCGCCGAGCCAACTCTCTTGA
GAGCTCTGATATCTTCTCCGACTCCCCCAAGGCTCTCGGTGCGGCTGGAGAGACCCTCTT
TCAGAAGTTCTTGCCGTTCAACTGCGGCGACGACGATGAGTCCGACCCTTATTCGTCAGA
TCATTTTCGGATGTTTGAGTTTAAGGTTCGCCGGTGCACTCGCAGCCGCAGCCACGACTG
GACTGATTGTCCCTTTGCTCATCCCGGGGAGAAGGCTCGCAGGAGGGACCCCCGGAGGTA
CCATTACTCAGGGACTGTGTGCTCGGAGTACCGGCGAGGTGGGTGTAGTAGAGGCGATAA
CTGCGAGTTTTCACATGGGGTTTTCGAGTGCTGGCTACACCCAGCTCGTTACAGGACTGA
GGCCTGCAAAGATGGAAAGAATTGTAAGAGAAAGGTCTGTTTCTTCGCTCATTCCCGTAA
GCAGCTTCGGGTATTGCCTTTGCATTCACAAACCAATGGAACCCCAGATGTAAAGTTCTC
GCCTCTGAACCATTGCTGCGTGTTTTGCCACTCTGCAACTTCTCCCACTTCTACCTTAAT
GGGTACGTCCCATTTTTCGCCGCCGGCGTCGCCGTCTCCCCCTCTGTCTCCGGTGAACGC
CACATATTCTCCAATTTCTCGTTACAATGATCGCTCAACAAGCCTAGATTCGAGTAATAT
GAGCCAATTTCGACATGTAATGTTGAGCTACAACAAGGACGTTGTTGCGGAGCTGATGAG
CTCTTTGGAAGCCATAAACATCAACGAAGCTTCACCCGAACATACCAACCCATTGGTCGA
CTCTTGTTTCGCCAGTGAAGATCATCAGCAGTTTAGTCTCTCTCCATCAATCCCAAATGC
TTCTGGGTCCAGGCATTTTTTCAATGGAGACTGTTCGAGCAAAAGCTCCATTGAGGATAA
GCTCAGTAGTGAAAATGGCAGCTGGGCTTGTCCTGATCTTGGGTGGGTCAACGATCTGTT
GATGTAGTTGAAGATGTCCCAGATAACAACAAAACCAACAGACCAATAAGATGATGGCTG
TGAAGAAAAGTCGAAGAAGATGAAAAGATGTATATATGGAGTCTTGCACCAGCCCCATAC
ATATATATAAACAGTCTGTATATATGTATGATTTGGTGTAACATTCTTGCTTTCTCCGTT
GCTGTTCCTGTTCCTTGTTTTATTTTTTTTCTTTTCGGTGGTGAGTTTCCAAGTCCCTTT
GAAGTGGAGGAAGAACATGTGATCTTGTTTTGTGAATTGAAATGGAAACAAAATCATGAG
TTCATAATGTTAATTCTCTCTTTTTCCTCATGTAGTGTCTAATAATGATAATAATTTTGA
GGTAATAGACCCAA