Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03140.t01
CDS Infomation

cds chromosome:12X:12:3919806:3931756:1 gene:VIT_12s0028g03140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGTTAAAGTTATATCACGTTCCACGGATGAATTTACTCGCGAACGAAGCCAAGAT
CTCCAGAGGGTATTTCGAAACTTTGATCCAAACCTACGAAAGCAAGAAAAGGCGGTTGAA
TATGTACGCGCTCTTAATGCGGCTAAATTGGATAAGGTTTTTGCCAGGCCGTTTATTGGA
GCAATGGATGGTCATATAGATTCCATTTCTTGTATGGCAAAGAATCCCAATTACTTGAAA
GGGATATTTTCTGGTTCAATGGATGGAGATATTCGTCTTTGGGATATAGCTTCCAGGCGA
ACAGTTTGTCAGTTTCCTGGTCACCAAGGTGCTGTACGGGGTTTGACAGCATCCACAGAT
GGACGCATTCTTGTATCATGTGGAACTGATTGCACTGTCAGGCTATGGAATGTACCTGTT
GCTACCATCAGCGACTCAGATGACTCCTCTGATAATTCTATGAAGCCATTGGCGGTTCAC
GTTTGGAAAAATGCATTCTGGGGTGTCGATCATCAGTGGGATGGTAATCTTTTTGCCACT
GCTGGTGCCCAAGTAGATATCTGGGACCACAATAGGTCTCAACCTGTTAACACTTTTCAA
TGGGGAAATGACTCTGTTATAGCTGTTCGATTTAATCCTGGAGAACCAGATATCTTGGCA
GCATCAGCTAGTGACCGCAGCCTAATACTATACGATTTGCGGATGTCATCCCCAGCAAGG
AAGCTTATAATGAGGACAAAAACTAATTCTATTTCTTGGAATCCAATGGAACCCATGAAC
TTCACAGCTGCTAATGAAGATTGCAACTGCTATAGCTATGATGCTAGAAAACTGGATGAA
GCCAAATGTGTGCACAAAGATCATGTTTCTGCAGTGATGGATATTGATTACTCACCCACT
GGTCGGGAATTTGTAACCGGATCTTATGATAGAACAGTAAGAATATTCCAATACAATGGT
GGGCATAGTCGGGAAATCTATCATACTAAGAGAATGCAAAGGGTTTTCTGTGTCAAGTTC
ACCTGTGATGCAAGTTACGTCATCTCAGGGAGTGATGACACCAACCTACGACTTTGGAAA
GCTAAAGCATCAGAACAATTGGGAGTTCTTCTCCCAAGGGAACGGAAAAAGCATGAATAT
CATGAGGCTGTCAAAAATCGGTACAAGCACCTCCCTGAGGTGAAGCGTATTGTCAGGCAC
AGGCACTTGCCAAAACCAATATTTAAGGCTGCTGCTCTCAGACGCACTATGACTGAAGCG
GAAAGGAGGAAAGAAGAGAAGAGGAAAGCTCACAGTGCCCCGGGAAGCATTTCAACAGAG
CCATTGCGGAAAAGAAGAATTATCCAAGAAGTTGAGTGA

Peptide Sequence

PEP ID

VIT_12s0028g03140.t01
PEP Infomation

pep chromosome:12X:12:3919806:3931756:1 gene:VIT_12s0028g03140 transcript:VIT_12s0028g03140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRKQEKAVEYVRALNAAKLDKVFARPFIG
AMDGHIDSISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTD
GRILVSCGTDCTVRLWNVPVATISDSDDSSDNSMKPLAVHVWKNAFWGVDHQWDGNLFAT
AGAQVDIWDHNRSQPVNTFQWGNDSVIAVRFNPGEPDILAASASDRSLILYDLRMSSPAR
KLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFTCDASYVISGSDDTNLRLWK
AKASEQLGVLLPRERKKHEYHEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTMTEA
ERRKEEKRKAHSAPGSISTEPLRKRRIIQEVE

Transcript Sequence

Transcript ID

VIT_12s0028g03140.t01
Transcript Infomation

cdna chromosome:12X:12:3919806:3931756:1 gene:VIT_12s0028g03140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCGTCTCTCACCCTAGGGTTTTTCACAGACCATGAGAAGCTACAGAGGAAGTCCAGAC
AAACGTAATTGCGATTGAGCGTTCTCTTCTTTCTCCATCTGGGGTTCTCCCTATTTAAAA
ACCGATAATGAAGGTTAAAGTTATATCACGTTCCACGGATGAATTTACTCGCGAACGAAG
CCAAGATCTCCAGAGGGTATTTCGAAACTTTGATCCAAACCTACGAAAGCAAGAAAAGGC
GGTTGAATATGTACGCGCTCTTAATGCGGCTAAATTGGATAAGGTTTTTGCCAGGCCGTT
TATTGGAGCAATGGATGGTCATATAGATTCCATTTCTTGTATGGCAAAGAATCCCAATTA
CTTGAAAGGGATATTTTCTGGTTCAATGGATGGAGATATTCGTCTTTGGGATATAGCTTC
CAGGCGAACAGTTTGTCAGTTTCCTGGTCACCAAGGTGCTGTACGGGGTTTGACAGCATC
CACAGATGGACGCATTCTTGTATCATGTGGAACTGATTGCACTGTCAGGCTATGGAATGT
ACCTGTTGCTACCATCAGCGACTCAGATGACTCCTCTGATAATTCTATGAAGCCATTGGC
GGTTCACGTTTGGAAAAATGCATTCTGGGGTGTCGATCATCAGTGGGATGGTAATCTTTT
TGCCACTGCTGGTGCCCAAGTAGATATCTGGGACCACAATAGGTCTCAACCTGTTAACAC
TTTTCAATGGGGAAATGACTCTGTTATAGCTGTTCGATTTAATCCTGGAGAACCAGATAT
CTTGGCAGCATCAGCTAGTGACCGCAGCCTAATACTATACGATTTGCGGATGTCATCCCC
AGCAAGGAAGCTTATAATGAGGACAAAAACTAATTCTATTTCTTGGAATCCAATGGAACC
CATGAACTTCACAGCTGCTAATGAAGATTGCAACTGCTATAGCTATGATGCTAGAAAACT
GGATGAAGCCAAATGTGTGCACAAAGATCATGTTTCTGCAGTGATGGATATTGATTACTC
ACCCACTGGTCGGGAATTTGTAACCGGATCTTATGATAGAACAGTAAGAATATTCCAATA
CAATGGTGGGCATAGTCGGGAAATCTATCATACTAAGAGAATGCAAAGGGTTTTCTGTGT
CAAGTTCACCTGTGATGCAAGTTACGTCATCTCAGGGAGTGATGACACCAACCTACGACT
TTGGAAAGCTAAAGCATCAGAACAATTGGGAGTTCTTCTCCCAAGGGAACGGAAAAAGCA
TGAATATCATGAGGCTGTCAAAAATCGGTACAAGCACCTCCCTGAGGTGAAGCGTATTGT
CAGGCACAGGCACTTGCCAAAACCAATATTTAAGGCTGCTGCTCTCAGACGCACTATGAC
TGAAGCGGAAAGGAGGAAAGAAGAGAAGAGGAAAGCTCACAGTGCCCCGGGAAGCATTTC
AACAGAGCCATTGCGGAAAAGAAGAATTATCCAAGAAGTTGAGTGAGTTGATTATTAACA
GATGGTCAGGGTAGCCTGCTTGTGGATAACTGATTATCCAAGGTTATTGGCTGTTTCATG
GGCAAGTTGGTTCCTTTCTCAGCACAATGCAGGTGTCTCATTTCATGGTTCCTTGGGGTA
CGATGACTCACCATCCCTTACCTCCTGAAGCACAAAGCAGAAATCAAGCATGATATGTAA
CGATTTTGTTAGGTCCATGAATTTTTGACATTTTGTAATCTATCATGATTTGGTTCATTA
AAATTTTGTGCTCTCTCATCTTACCTCTATAGAATAT