Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03120.t01
CDS Infomation

cds chromosome:12X:12:3891877:3892934:1 gene:VIT_12s0028g03120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCCTCTGCAGTACTCTCTTTTCTCTTCATTCTGGTGCTCTTTTCCTCCCCCCAG
ATTCAAGCTAGAGAGAGCAAATTCTTCAGCAAGGTCACACACTACAGCAGCCCTACGGAA
GCTGCTAAAGAGCCTGGTTCTGAATATCCGGAAGCTCCAGTATATGCCCCTACACCCGCA
CCCGCACCTGGACCTGCATCTGAACTGTTCCAATCTGATACCCTAGATGGCTACGGCCTT
TATGGCCGTGGTTCGAATGAATTCTCCCCAGCCACTGTCAGTGAGAATGAAGTTGTACCG
GAGGAGCTAACCGATGAGAGCTACAAGGAGTTGGCGGAAACTAGCTACTCCAACAACAAC
AATAGATACTCCACTGAATACTACAAAAACAATGGCCACACGACTGAGCAACAAGGGATG
AGCGACACAAGGTTTTTGGAGAATGGTAAGTACTCCTACAAACCTGATACATACTCCCCC
AACTCAAACAAAAATGGCTATTCCTCAAGCTACAGAAACAATGGCTACTCCACAAGCTCC
AGCCACAACAATGGCTACTCCACAAGCTCCAGCCACAACAATGGCTACTCCACAAGCTCC
AGCTACAACAATGGGTACTCAACAGAGAAACAAGGGATGAGTGATACGAGGTTTTTGGAA
AATGGGAAATACTATCACGACCTCAATAATGAGAATCACTATGTCGATGGCTACAATACG
GAGAAGGGAAGTACTTCCAATGAATTTTATTATTCGAACACAGAGAACTCCAATGAGTTC
AACTCCATGGAGGAGTATCAGAGGCAGCAGGAGGAGTACCAACAAGGTCAAGAGGAGTAC
GTCCCATAA

Peptide Sequence

PEP ID

VIT_12s0028g03120.t01
PEP Infomation

pep chromosome:12X:12:3891877:3892934:1 gene:VIT_12s0028g03120 transcript:VIT_12s0028g03120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPSAVLSFLFILVLFSSPQIQARESKFFSKVTHYSSPTEAAKEPGSEYPEAPVYAPTPA
PAPGPASELFQSDTLDGYGLYGRGSNEFSPATVSENEVVPEELTDESYKELAETSYSNNN
NRYSTEYYKNNGHTTEQQGMSDTRFLENGKYSYKPDTYSPNSNKNGYSSSYRNNGYSTSS
SHNNGYSTSSSHNNGYSTSSSYNNGYSTEKQGMSDTRFLENGKYYHDLNNENHYVDGYNT
EKGSTSNEFYYSNTENSNEFNSMEEYQRQQEEYQQGQEEYVP

Transcript Sequence

Transcript ID

VIT_12s0028g03120.t01
Transcript Infomation

cdna chromosome:12X:12:3891877:3892934:1 gene:VIT_12s0028g03120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCTTCCTACCTTTTTTTTTCTGCCTCCAATGGCTCCCTCTGCAGTACTCTCTTTTCTCT
TCATTCTGGTGCTCTTTTCCTCCCCCCAGATTCAAGCTAGAGAGAGCAAATTCTTCAGCA
AGGTCACACACTACAGCAGCCCTACGGAAGCTGCTAAAGAGCCTGGTTCTGAATATCCGG
AAGCTCCAGTATATGCCCCTACACCCGCACCCGCACCTGGACCTGCATCTGAACTGTTCC
AATCTGATACCCTAGATGGCTACGGCCTTTATGGCCGTGGTTCGAATGAATTCTCCCCAG
CCACTGTCAGTGAGAATGAAGTTGTACCGGAGGAGCTAACCGATGAGAGCTACAAGGAGT
TGGCGGAAACTAGCTACTCCAACAACAACAATAGATACTCCACTGAATACTACAAAAACA
ATGGCCACACGACTGAGCAACAAGGGATGAGCGACACAAGGTTTTTGGAGAATGGTAAGT
ACTCCTACAAACCTGATACATACTCCCCCAACTCAAACAAAAATGGCTATTCCTCAAGCT
ACAGAAACAATGGCTACTCCACAAGCTCCAGCCACAACAATGGCTACTCCACAAGCTCCA
GCCACAACAATGGCTACTCCACAAGCTCCAGCTACAACAATGGGTACTCAACAGAGAAAC
AAGGGATGAGTGATACGAGGTTTTTGGAAAATGGGAAATACTATCACGACCTCAATAATG
AGAATCACTATGTCGATGGCTACAATACGGAGAAGGGAAGTACTTCCAATGAATTTTATT
ATTCGAACACAGAGAACTCCAATGAGTTCAACTCCATGGAGGAGTATCAGAGGCAGCAGG
AGGAGTACCAACAAGGTCAAGAGGAGTACGTCCCATAAGCATTTGTCCATGATTAATTAA
AGAAGTTGATAGAGGGAGAATGACAGAGTCTTAAGACTAAATTATGGTGGATTTATATGT
GTGTTTTCAATAGCTTTTATTTCTGTTTGCACATGTTTTATGGCTTGCAAATGAAGAAAG
GACTATAAATCTCAAGTTCTGCATTTGGAGTCCAGAAA