Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g03050.t01
CDS Infomation

cds chromosome:12X:12:3798758:3800935:-1 gene:VIT_12s0028g03050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTTGGTGCAATGACTGCGACAACAGCCGGATGATCGAGGGAAGCTCCCCGCCGTCG
ACGGATAACAGTACTGTTATAGCTGAAAAACCTAAGGACACTGCAACTAGAACTTGTCCT
TCATGTGGTCATCAGATCAAATTGCAAGAACAGGCTCGAATTCATGATCTGCCAGGGCTA
CCGGCCGGAGTGAAGTTCGATCCGACTGATCAGGAGCTTCTTGAACATTTAGATGGGAAG
GTGAGGTGTGATGACCATAAGCTTCATCCTCTCATTGATGAATTCATCCCAACTCTTGAA
GGAGAGAATGGAATTTGCTACACCCACCCAGAAAAGTTACCAGGGGTGAGCAAAGATGGT
CTGATCCGCCATTTCTTCCATCGCCCTTCGAAGGCATACACTACGGGAACTCGAAAAAGA
AGAAAAGTGAGCACAGACTCAGACGGTGGGGAGACCCGGTGGCATAAAACAGGCAAGACT
AGACCAGTTTTTGTTGGTGGCAAGGTGAAGGGGTACAAGAAAATCCTTGTGCTCTACACC
AACTATGGGAAGCAAAGAAAGCCCGAGAAAACGAATTGGGTTATGCACCAGTACCACCTT
GGCAATAACGAAGAAGAGAAAGATGGAGAACTTGTAGTTTCCAAAGTTTTCTACCAGACA
CAACCACGACAATGCAGTTCCATCATGAAAGACTCCCTCCCCTCAAAATTAAAGGATCAT
CACAGCGGCCATGAGAGTCCAAATCTTAGAAACAATGCCCTTGTGGAGTACTATAATCCC
AATTCTTTCATATCCTTCGACCAAGGCAGCCAAAATAGATTGAGCCACGCCCGGCTAATT
CCTAATTTCACAGTCCATGATGGGTCTACCTTCTTACTCGAAAATGTGAAGGAACATATG
GGGAGGCAATAG

Peptide Sequence

PEP ID

VIT_12s0028g03050.t01
PEP Infomation

pep chromosome:12X:12:3798758:3800935:-1 gene:VIT_12s0028g03050 transcript:VIT_12s0028g03050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTWCNDCDNSRMIEGSSPPSTDNSTVIAEKPKDTATRTCPSCGHQIKLQEQARIHDLPGL
PAGVKFDPTDQELLEHLDGKVRCDDHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDG
LIRHFFHRPSKAYTTGTRKRRKVSTDSDGGETRWHKTGKTRPVFVGGKVKGYKKILVLYT
NYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCSSIMKDSLPSKLKDH
HSGHESPNLRNNALVEYYNPNSFISFDQGSQNRLSHARLIPNFTVHDGSTFLLENVKEHM
GRQ

Transcript Sequence

Transcript ID

VIT_12s0028g03050.t01
Transcript Infomation

cdna chromosome:12X:12:3798758:3800935:-1 gene:VIT_12s0028g03050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACTGTGGGATGGGCATTAGAGGAAAACTAGAGAAATGACTTGGTGCAATGACTGCGACA
ACAGCCGGATGATCGAGGGAAGCTCCCCGCCGTCGACGGATAACAGTACTGTTATAGCTG
AAAAACCTAAGGACACTGCAACTAGAACTTGTCCTTCATGTGGTCATCAGATCAAATTGC
AAGAACAGGCTCGAATTCATGATCTGCCAGGGCTACCGGCCGGAGTGAAGTTCGATCCGA
CTGATCAGGAGCTTCTTGAACATTTAGATGGGAAGGTGAGGTGTGATGACCATAAGCTTC
ATCCTCTCATTGATGAATTCATCCCAACTCTTGAAGGAGAGAATGGAATTTGCTACACCC
ACCCAGAAAAGTTACCAGGGGTGAGCAAAGATGGTCTGATCCGCCATTTCTTCCATCGCC
CTTCGAAGGCATACACTACGGGAACTCGAAAAAGAAGAAAAGTGAGCACAGACTCAGACG
GTGGGGAGACCCGGTGGCATAAAACAGGCAAGACTAGACCAGTTTTTGTTGGTGGCAAGG
TGAAGGGGTACAAGAAAATCCTTGTGCTCTACACCAACTATGGGAAGCAAAGAAAGCCCG
AGAAAACGAATTGGGTTATGCACCAGTACCACCTTGGCAATAACGAAGAAGAGAAAGATG
GAGAACTTGTAGTTTCCAAAGTTTTCTACCAGACACAACCACGACAATGCAGTTCCATCA
TGAAAGACTCCCTCCCCTCAAAATTAAAGGATCATCACAGCGGCCATGAGAGTCCAAATC
TTAGAAACAATGCCCTTGTGGAGTACTATAATCCCAATTCTTTCATATCCTTCGACCAAG
GCAGCCAAAATAGATTGAGCCACGCCCGGCTAATTCCTAATTTCACAGTCCATGATGGGT
CTACCTTCTTACTCGAAAATGTGAAGGAACATATGGGGAGGCAATAGAGAGGAGGAAGAG
TCGAAGCAAATTTCTATTAGGTAATTAATGCAGTAATGGTGCTATATAAGTTATGAGTAA
TGCATGCTATCGTTTCCTCCTTGTGATATAAATCAGGAGGCTGTTGAATCCTAGAGGATA
GAGTGCAATTAACCAGCAACACGAACAATTATTCTCGAAGTACCGATCTCTTCTCAAGGA
CAGCGGATCGATTCCCTTTACCCATGGAATAAGTTTTTATCTTTTTCTGCAGATTTCTCA
CATGGGTCAATGGCCCTTTGATGTGGGATATTAAATTACCAATTGTACAAAGATGATTCT
TAGTTTATATAGCACGATAGGCCTTCACTCTTCCAGGCTTTCAGCTTCATATCCTTTGTC
AATGATGAGAAAAATAAAGTGTACTATTTCCCTTCTTTCATCTTCTAGCAGCAGTAGATG
TTGGTTTGGATATTGACTACTCCTCTGTATATATATCTGTAATTATACATCAAATTTCTC
ATTTAGAGAATCAAATAAAACAAATTAGTAGCAAGTGTTCTAGAATA