Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02880.t01
CDS Infomation

cds chromosome:12X:12:3660135:3661490:-1 gene:VIT_12s0028g02880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCCGGCAAAGGGTGAGATATCAAGTGAGCTGCTTCAAGCTCAAGCTCATGTCTGG
AACCACATATTCAATTTCGTCAACTCCATGTCACTGAAATGTGCTATTCAACTAGGCATC
CCAGACATCATCCACAACCATGGCAAGCCCATGACTCTTCCTGAGCTGGTTGCTAAGCTC
CCAGTCCACCCAAAAAAGACCCAGTACGTGTACCGTCTCATGCGTGTTCTTGTTCAATCT
GACTTCTTTGCTGCGCAAAGAGCCCAACAGAGTGAGGAAGAAGAGGGGTATGTGCTTACG
CATGCCTCTCAGCTCCTCCTAAAGGATGACTCCTTGAGCGTAAGGCCCTTCTTGCTTGCC
ATGCTCGACCCAACTTTAACTAAACCATGGCATTATGTGAGTGCTTGGTTTCAAAATGAT
GACCCCACTCCGTTTAACACTGCTCACGAGCGGACATTATGGGATTATGCTGGCCATGAA
CCTCAGCTCAACTATTTCATCAACGAAGCTATGGCTAGTGATGCTCGCTTAGTCACTAGC
GTGCTGGTTAAGGAGGGCAAGGGCGTATTTGAGGGGTTGAATTCGTTAGTTGATGTAGGG
GGTGGCACGGGAACAGTGGCTAAGGCCATTGCCAACGCTTTCCCACACTTGAACTGCACT
GTGTTAGATCTCCCCCATGTGGTTGCTGGCTTGCAAGGGAGCAAGAACTTGAACTACTTC
GCAGGGGATATGTTTGAGCCAATTCCTCCTGCAGATGCAATTTTACTCAAGTGGATATTG
CATGACTGGAGCGATGAGGAATGCGTGAAAATACTAAAGCGATGCAGGGAAGCAATTCCG
AGCAAGGAAAAGGGAGGAAAGGTGATTATCATAGACATGATGATGAAGAACCAGAAAGGA
GACTGCAAGTCCAGGGAAACACAGCTGTTCTTCGACATGCTGATGATGGTTTTGGTCACG
GGTAAAGAGAGGGAGGAGAAAGAATGGGAGAAGCTTTTCTTGGATGCTGGTTTCAGTCAC
TACAAGATAACACCCATTTTGGGTTTGAGGTCGCTCATCGAGGTTTATCCTTGA

Peptide Sequence

PEP ID

VIT_12s0028g02880.t01
PEP Infomation

pep chromosome:12X:12:3660135:3661490:-1 gene:VIT_12s0028g02880 transcript:VIT_12s0028g02880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPAKGEISSELLQAQAHVWNHIFNFVNSMSLKCAIQLGIPDIIHNHGKPMTLPELVAKL
PVHPKKTQYVYRLMRVLVQSDFFAAQRAQQSEEEEGYVLTHASQLLLKDDSLSVRPFLLA
MLDPTLTKPWHYVSAWFQNDDPTPFNTAHERTLWDYAGHEPQLNYFINEAMASDARLVTS
VLVKEGKGVFEGLNSLVDVGGGTGTVAKAIANAFPHLNCTVLDLPHVVAGLQGSKNLNYF
AGDMFEPIPPADAILLKWILHDWSDEECVKILKRCREAIPSKEKGGKVIIIDMMMKNQKG
DCKSRETQLFFDMLMMVLVTGKEREEKEWEKLFLDAGFSHYKITPILGLRSLIEVYP

Transcript Sequence

Transcript ID

VIT_12s0028g02880.t01
Transcript Infomation

cdna chromosome:12X:12:3660135:3661490:-1 gene:VIT_12s0028g02880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGTGAGGTACATGGATCCGGCAAAGGGTGAGATATCAAGTGAGCTGCTTCAAGCTCAAG
CTCATGTCTGGAACCACATATTCAATTTCGTCAACTCCATGTCACTGAAATGTGCTATTC
AACTAGGCATCCCAGACATCATCCACAACCATGGCAAGCCCATGACTCTTCCTGAGCTGG
TTGCTAAGCTCCCAGTCCACCCAAAAAAGACCCAGTACGTGTACCGTCTCATGCGTGTTC
TTGTTCAATCTGACTTCTTTGCTGCGCAAAGAGCCCAACAGAGTGAGGAAGAAGAGGGGT
ATGTGCTTACGCATGCCTCTCAGCTCCTCCTAAAGGATGACTCCTTGAGCGTAAGGCCCT
TCTTGCTTGCCATGCTCGACCCAACTTTAACTAAACCATGGCATTATGTGAGTGCTTGGT
TTCAAAATGATGACCCCACTCCGTTTAACACTGCTCACGAGCGGACATTATGGGATTATG
CTGGCCATGAACCTCAGCTCAACTATTTCATCAACGAAGCTATGGCTAGTGATGCTCGCT
TAGTCACTAGCGTGCTGGTTAAGGAGGGCAAGGGCGTATTTGAGGGGTTGAATTCGTTAG
TTGATGTAGGGGGTGGCACGGGAACAGTGGCTAAGGCCATTGCCAACGCTTTCCCACACT
TGAACTGCACTGTGTTAGATCTCCCCCATGTGGTTGCTGGCTTGCAAGGGAGCAAGAACT
TGAACTACTTCGCAGGGGATATGTTTGAGCCAATTCCTCCTGCAGATGCAATTTTACTCA
AGTGGATATTGCATGACTGGAGCGATGAGGAATGCGTGAAAATACTAAAGCGATGCAGGG
AAGCAATTCCGAGCAAGGAAAAGGGAGGAAAGGTGATTATCATAGACATGATGATGAAGA
ACCAGAAAGGAGACTGCAAGTCCAGGGAAACACAGCTGTTCTTCGACATGCTGATGATGG
TTTTGGTCACGGGTAAAGAGAGGGAGGAGAAAGAATGGGAGAAGCTTTTCTTGGATGCTG
GTTTCAGTCACTACAAGATAACACCCATTTTGGGTTTGAGGTCGCTCATCGAGGTTTATC
CTTGAT