Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02860.t01
CDS Infomation

cds chromosome:12X:12:3649385:3650615:1 gene:VIT_12s0028g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGTGGGTAGTGGAAAGAGAGCTAGTCTGCTGCTTCAAGCACAAGCTCATGTATGG
AATCATACAATGAACTTCGTAAACTCCATGGCACTGAAATGTGCAGTTCGACTGGGCATT
CCAGATGCCATCAACAACCATGGCCAACCCATTACTCTTTCTGAACTGGTCACTGCCTTG
TCAATCAATCCAATAAAAGCTCCTTGCCTCCATCGTCTTATGCGCGTTCTCGTTCATTCT
GGCTTCTTTGCTCAACAACAGGCCGACCACAATGAGCAAGAACAACTGTATTCGCTAACT
TATGCATCTCGGTTCCTGCTAAAAGATGAGCCAACCAGTGGAGCGCCGCTCTTGCTTGTT
CAAGTTGATCCGCATTTAACAAACCCCTGCCATTTCTTGAGTGATTGGTTCCGAAATAGT
GATCCCACCCCATTCGTTACTGCATATGGGAAGCCATTTTGGGATTATGCAGCTCATGAA
CCAAAGTTTAACAATTTCTTTAATGAGGCCATGGCAAGTGACTCCCAGCTGATAGCCAGT
GTGGTGGTTGGAGAGTGTAAGGAGGTATTCCGAGGGTTGAGCTCCTTGATTGATGTTGGG
GGCGGCACCGGAACAATGGCCAAGGTCATTGCCAAAGCATTTCCACACTTGAAGTGTACT
GTGTTTGATCAACCGCATGTGGTTGCAAACTTGCAGGGTGGTGAGAACTTGGAGTTTGTT
GGAGGGGATATATTTGAGGCAATTCCTCCTGCAGATGCAATCTTACTTAAGTCGATTTTA
CACAACTGGAGTGACGGAGAATGTGTGAAGATACTGAAGAAATGCAAAGAAGCAATACAT
CCAAGAAAGGACAAGGGAGGGAAGGTGATAATCATAGACATAGTAATGGAAAACAACAAG
GGAGATGAGGCAGTAGAAGCACAGCTCTTTTACGACATACTTATGATGGTTGTGGTTGCA
GGCAAAGAGAGAAATGAGAGAGAATGGGAGAATCTCTTCCTGGCTGCAGGCTTCGCGCAC
TATAAGATAACCTCGACTTTGGGTCCAAGGTCCCTCATTGAGGTTTATCCTTGA

Peptide Sequence

PEP ID

VIT_12s0028g02860.t01
PEP Infomation

pep chromosome:12X:12:3649385:3650615:1 gene:VIT_12s0028g02860 transcript:VIT_12s0028g02860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDVGSGKRASLLLQAQAHVWNHTMNFVNSMALKCAVRLGIPDAINNHGQPITLSELVTAL
SINPIKAPCLHRLMRVLVHSGFFAQQQADHNEQEQLYSLTYASRFLLKDEPTSGAPLLLV
QVDPHLTNPCHFLSDWFRNSDPTPFVTAYGKPFWDYAAHEPKFNNFFNEAMASDSQLIAS
VVVGECKEVFRGLSSLIDVGGGTGTMAKVIAKAFPHLKCTVFDQPHVVANLQGGENLEFV
GGDIFEAIPPADAILLKSILHNWSDGECVKILKKCKEAIHPRKDKGGKVIIIDIVMENNK
GDEAVEAQLFYDILMMVVVAGKERNEREWENLFLAAGFAHYKITSTLGPRSLIEVYP

Transcript Sequence

Transcript ID

VIT_12s0028g02860.t01
Transcript Infomation

cdna chromosome:12X:12:3649385:3650615:1 gene:VIT_12s0028g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAATAATATGGATGTGGGTAGTGGAAAGAGAGCTAGTCTGCTGCTTCAAGCACAAGCTCA
TGTATGGAATCATACAATGAACTTCGTAAACTCCATGGCACTGAAATGTGCAGTTCGACT
GGGCATTCCAGATGCCATCAACAACCATGGCCAACCCATTACTCTTTCTGAACTGGTCAC
TGCCTTGTCAATCAATCCAATAAAAGCTCCTTGCCTCCATCGTCTTATGCGCGTTCTCGT
TCATTCTGGCTTCTTTGCTCAACAACAGGCCGACCACAATGAGCAAGAACAACTGTATTC
GCTAACTTATGCATCTCGGTTCCTGCTAAAAGATGAGCCAACCAGTGGAGCGCCGCTCTT
GCTTGTTCAAGTTGATCCGCATTTAACAAACCCCTGCCATTTCTTGAGTGATTGGTTCCG
AAATAGTGATCCCACCCCATTCGTTACTGCATATGGGAAGCCATTTTGGGATTATGCAGC
TCATGAACCAAAGTTTAACAATTTCTTTAATGAGGCCATGGCAAGTGACTCCCAGCTGAT
AGCCAGTGTGGTGGTTGGAGAGTGTAAGGAGGTATTCCGAGGGTTGAGCTCCTTGATTGA
TGTTGGGGGCGGCACCGGAACAATGGCCAAGGTCATTGCCAAAGCATTTCCACACTTGAA
GTGTACTGTGTTTGATCAACCGCATGTGGTTGCAAACTTGCAGGGTGGTGAGAACTTGGA
GTTTGTTGGAGGGGATATATTTGAGGCAATTCCTCCTGCAGATGCAATCTTACTTAAGTC
GATTTTACACAACTGGAGTGACGGAGAATGTGTGAAGATACTGAAGAAATGCAAAGAAGC
AATACATCCAAGAAAGGACAAGGGAGGGAAGGTGATAATCATAGACATAGTAATGGAAAA
CAACAAGGGAGATGAGGCAGTAGAAGCACAGCTCTTTTACGACATACTTATGATGGTTGT
GGTTGCAGGCAAAGAGAGAAATGAGAGAGAATGGGAGAATCTCTTCCTGGCTGCAGGCTT
CGCGCACTATAAGATAACCTCGACTTTGGGTCCAAGGTCCCTCATTGAGGTTTATCCTTG
A