Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02850.t01
CDS Infomation

cds chromosome:12X:12:3645744:3647306:1 gene:VIT_12s0028g02850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTGGCAGTTGGTGAGACATCGACTGAGCTACTTCATGCTCATGCTCATGTCTGG
AATCATATATTCAACTTCATAAACTCCATGTCACTGAAATGTGCTATTGAACTAGGCATC
CCAGACATCATCCACAACCATGGGAAGCCCATGACTCTTTCTGAGCTGGTTGCTGAGCTC
CCAGTCAACCCAGAGAAGACGAAATGCGTGTACCGTCTCATGCGCCTTCTTGTTCAGTCT
GGCTTCTTTACCAGGAAAAGAGTCCAAGAAAGCGGGCAAGAAGAGGGGTATGTGCTTACA
CATGCCTCTAGGCTCCTCCTAAAGGACGACCCCTTGAGTGCAAGGCCCTTCTTGCTTGCC
ATGCTCGACCCAGTTTTAATTACACCATGGCAATATGTGAGTGCTTGGTTTCAAAATGAT
GATCCCACTCCATTCGACACTGCTCATGGGCGGACATTTTGGGATTATGCTGGCCATGAA
CCCAAGCTCAACAATTTCTTCAATGAAGCCATGGCTAGTGATGCTCGCTTAGTAACCAGC
GTGCTGATTAAGGACTGCAAGGGCATATTTGTGGGGTTGAATTCATTAGTTGATGTAGGG
GGTGGCACAGGGACAGTGGCTAGGGCCATTGCCAATGCTTTCCCACACTTGAACTGCACC
GTGTTAGATCTCCCCCATGTGGTTGCTGGCTTGGAAGGGAGTAAGAACTTGAACTACCTT
GCAGGGGATATGTTTGAAGCAATTCCTCCTGCAGATGCTATTTTACTCAAGTGGATATTG
CATGACTGGAACCATGACGAATGTGTGAAGATACTCAAGCGATGCAGAGATGCGATTCCC
AGCAAGGAAAAAGGAGGAAAGGTGATAATCATAGACATGATGATGGAGAACCAGAAAGCA
GATGATGAGTCCATCGAAACACAACTCTTTTGGGATATGCTGATGATGATTGTGCTAACG
GGCCAAGAGAGGAACATTAAAGACTGGGAGAAGCTCTTCTTTGATGCTGGTTTCAGTGGC
TATAAGATAACTCCCATGCTGGGTTTAAGGTCTCTCATCGAGGTTTACCCATGA

Peptide Sequence

PEP ID

VIT_12s0028g02850.t01
PEP Infomation

pep chromosome:12X:12:3645744:3647306:1 gene:VIT_12s0028g02850 transcript:VIT_12s0028g02850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALAVGETSTELLHAHAHVWNHIFNFINSMSLKCAIELGIPDIIHNHGKPMTLSELVAEL
PVNPEKTKCVYRLMRLLVQSGFFTRKRVQESGQEEGYVLTHASRLLLKDDPLSARPFLLA
MLDPVLITPWQYVSAWFQNDDPTPFDTAHGRTFWDYAGHEPKLNNFFNEAMASDARLVTS
VLIKDCKGIFVGLNSLVDVGGGTGTVARAIANAFPHLNCTVLDLPHVVAGLEGSKNLNYL
AGDMFEAIPPADAILLKWILHDWNHDECVKILKRCRDAIPSKEKGGKVIIIDMMMENQKA
DDESIETQLFWDMLMMIVLTGQERNIKDWEKLFFDAGFSGYKITPMLGLRSLIEVYP

Transcript Sequence

Transcript ID

VIT_12s0028g02850.t01
Transcript Infomation

cdna chromosome:12X:12:3645744:3647306:1 gene:VIT_12s0028g02850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAACAATCTCAAGATATCACAGCGAGATACATGGCTTTGGCAGTTGGTGAGACATCGACT
GAGCTACTTCATGCTCATGCTCATGTCTGGAATCATATATTCAACTTCATAAACTCCATG
TCACTGAAATGTGCTATTGAACTAGGCATCCCAGACATCATCCACAACCATGGGAAGCCC
ATGACTCTTTCTGAGCTGGTTGCTGAGCTCCCAGTCAACCCAGAGAAGACGAAATGCGTG
TACCGTCTCATGCGCCTTCTTGTTCAGTCTGGCTTCTTTACCAGGAAAAGAGTCCAAGAA
AGCGGGCAAGAAGAGGGGTATGTGCTTACACATGCCTCTAGGCTCCTCCTAAAGGACGAC
CCCTTGAGTGCAAGGCCCTTCTTGCTTGCCATGCTCGACCCAGTTTTAATTACACCATGG
CAATATGTGAGTGCTTGGTTTCAAAATGATGATCCCACTCCATTCGACACTGCTCATGGG
CGGACATTTTGGGATTATGCTGGCCATGAACCCAAGCTCAACAATTTCTTCAATGAAGCC
ATGGCTAGTGATGCTCGCTTAGTAACCAGCGTGCTGATTAAGGACTGCAAGGGCATATTT
GTGGGGTTGAATTCATTAGTTGATGTAGGGGGTGGCACAGGGACAGTGGCTAGGGCCATT
GCCAATGCTTTCCCACACTTGAACTGCACCGTGTTAGATCTCCCCCATGTGGTTGCTGGC
TTGGAAGGGAGTAAGAACTTGAACTACCTTGCAGGGGATATGTTTGAAGCAATTCCTCCT
GCAGATGCTATTTTACTCAAGTGGATATTGCATGACTGGAACCATGACGAATGTGTGAAG
ATACTCAAGCGATGCAGAGATGCGATTCCCAGCAAGGAAAAAGGAGGAAAGGTGATAATC
ATAGACATGATGATGGAGAACCAGAAAGCAGATGATGAGTCCATCGAAACACAACTCTTT
TGGGATATGCTGATGATGATTGTGCTAACGGGCCAAGAGAGGAACATTAAAGACTGGGAG
AAGCTCTTCTTTGATGCTGGTTTCAGTGGCTATAAGATAACTCCCATGCTGGGTTTAAGG
TCTCTCATCGAGGTTTACCCATGATCAATATATATGTTGGTAGTAGTATGTGCAAATATA
TTTCCACTAAATAAACTCTGGTAAGAATGTTGTAGACCGTATCAAGTTTGTGTGTGCTTG
AAGGAATAATGATCTCTCTCTGAGGCTATGAATAATCTCTGTTATGTAATTTGATATTTA
AGTTCTATAATAAAGAAGTATTATTTGTTGTCATA