Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02840.t01
CDS Infomation

cds chromosome:12X:12:3636149:3638405:1 gene:VIT_12s0028g02840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGGAAAGTGTTGAGACATCCAGTGAGTTGCTTCATGCTCAAGCTCATGTCTGG
AACCATATATTCAACTTCATCAACTCCATGTCACTGAAATGTGCCATTCAACTAGGCATC
CCAGACATCATCCACAACCATGGCAAGCCCATGACTCTTCCTGAGCTGGTTGCTAAGCTC
CCAATCCACCCAAAAAAGGTTTGGTGCGTTTACCGTCTCATGCGCATTCTTGTTCAATCT
GGCTTCTTTGCTAGGCAAAAAGTTGAAGAAAGTGAGCAAGAAGAGGGGTATGTGCTTACA
CATGCCTCTAGGCTCCTGCTAGAGGACGATCCCTTGAGCGTAAGGCCCTTCTTGCTTGCC
ATGCTTGACCCAATTTTAACTAAACCGTGGCATTATGTGAGTGCTTGGTTTCAAAATGAT
GATCCCACCCCCTTCGACACTGCTCATGGGCGGACGTTTTGGGACTATGGTGGCCATGAA
CCCAAGATCAACAATTTCTTCAATGAAGCCATGGCTAGTGATGCTCGCTTAGTCACTAGC
GTGCTGATTAAGGACTGCAAGGGCGTATTTGAGGGATTGAACTCATTGGTTGATGTAGGG
GGTGGCACTGGAACAGTGGCTAAGGCCATTGCTAACGCTTTCCCACACTTGAACTGCACT
GTGTTTGATCTCCCGCACGTGGTTGCTGGCTTGGAAGGGAGCAAGAACTTGAACTACCTT
GGAGGCGACATGTTTAAAGGAATTCCTCCTGCAGATGCAATTTTACTCAAGTGGATATTA
CATGACTGGAACGATGAAGAATGTGTCAAGATACTACAGCAATGCAGACAGGCGATTCCA
AGCAAGGAGAAGGGAGGCAAGGTGATAATAATAGACATGATGATGGAGAACCAGAAAGGA
GATGATGAGTCCATGGAAACACAGCTCTTTTTTGATATGCTGATGATGATTTTAGTCACG
GGTCAAGAGAGGAACGAAAAAGAATGGGAGAAGCTGTTCTTGGATGCTGGTTTCAGTGGC
TATAAGATAACCCCCATACTGGGTTTAAGGTCTCTTATTGAAGTTTATCCTTGA

Peptide Sequence

PEP ID

VIT_12s0028g02840.t01
PEP Infomation

pep chromosome:12X:12:3636149:3638405:1 gene:VIT_12s0028g02840 transcript:VIT_12s0028g02840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLESVETSSELLHAQAHVWNHIFNFINSMSLKCAIQLGIPDIIHNHGKPMTLPELVAKL
PIHPKKVWCVYRLMRILVQSGFFARQKVEESEQEEGYVLTHASRLLLEDDPLSVRPFLLA
MLDPILTKPWHYVSAWFQNDDPTPFDTAHGRTFWDYGGHEPKINNFFNEAMASDARLVTS
VLIKDCKGVFEGLNSLVDVGGGTGTVAKAIANAFPHLNCTVFDLPHVVAGLEGSKNLNYL
GGDMFKGIPPADAILLKWILHDWNDEECVKILQQCRQAIPSKEKGGKVIIIDMMMENQKG
DDESMETQLFFDMLMMILVTGQERNEKEWEKLFLDAGFSGYKITPILGLRSLIEVYP

Transcript Sequence

Transcript ID

VIT_12s0028g02840.t01
Transcript Infomation

cdna chromosome:12X:12:3636149:3638405:1 gene:VIT_12s0028g02840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCTTAATTCTCCGATCAGGGTGAGGTACGTACATGGATTTGGAAAGTGTTGAGACATCC
AGTGAGTTGCTTCATGCTCAAGCTCATGTCTGGAACCATATATTCAACTTCATCAACTCC
ATGTCACTGAAATGTGCCATTCAACTAGGCATCCCAGACATCATCCACAACCATGGCAAG
CCCATGACTCTTCCTGAGCTGGTTGCTAAGCTCCCAATCCACCCAAAAAAGGTTTGGTGC
GTTTACCGTCTCATGCGCATTCTTGTTCAATCTGGCTTCTTTGCTAGGCAAAAAGTTGAA
GAAAGTGAGCAAGAAGAGGGGTATGTGCTTACACATGCCTCTAGGCTCCTGCTAGAGGAC
GATCCCTTGAGCGTAAGGCCCTTCTTGCTTGCCATGCTTGACCCAATTTTAACTAAACCG
TGGCATTATGTGAGTGCTTGGTTTCAAAATGATGATCCCACCCCCTTCGACACTGCTCAT
GGGCGGACGTTTTGGGACTATGGTGGCCATGAACCCAAGATCAACAATTTCTTCAATGAA
GCCATGGCTAGTGATGCTCGCTTAGTCACTAGCGTGCTGATTAAGGACTGCAAGGGCGTA
TTTGAGGGATTGAACTCATTGGTTGATGTAGGGGGTGGCACTGGAACAGTGGCTAAGGCC
ATTGCTAACGCTTTCCCACACTTGAACTGCACTGTGTTTGATCTCCCGCACGTGGTTGCT
GGCTTGGAAGGGAGCAAGAACTTGAACTACCTTGGAGGCGACATGTTTAAAGGAATTCCT
CCTGCAGATGCAATTTTACTCAAGTGGATATTACATGACTGGAACGATGAAGAATGTGTC
AAGATACTACAGCAATGCAGACAGGCGATTCCAAGCAAGGAGAAGGGAGGCAAGGTGATA
ATAATAGACATGATGATGGAGAACCAGAAAGGAGATGATGAGTCCATGGAAACACAGCTC
TTTTTTGATATGCTGATGATGATTTTAGTCACGGGTCAAGAGAGGAACGAAAAAGAATGG
GAGAAGCTGTTCTTGGATGCTGGTTTCAGTGGCTATAAGATAACCCCCATACTGGGTTTA
AGGTCTCTTATTGAAGTTTATCCTTGATCAATATCTAGTGGTACTAGTATTTGCAAGTAT
GTTTGCACTAAATCTAAATAAAGTGCTCTGGCAAGAATGTTGGAGATCAGGACCCTATCA
AGTTTGTGTTCGCATGCAGGCATATTAATAATCTTTCTGGGAGTATGAAGAATCTCTGTT
AAATAACTTGATATT