Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02670.t01
CDS Infomation

cds chromosome:12X:12:3462915:3470939:-1 gene:VIT_12s0028g02670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAATTTGCCCCGATTGAGACGAGATTGGGGGCAGGTTTTGAGGAGGGGATCAATG
AGGAAGGGTTCGAAGAGTAATTGCAAATCTGCATCACACCAACTTTTCAAGGACAAGGCA
AAAAACCGGGTTGATGATCTCCAAGGGATGTTCACCAATCTTCAATTTGCTAGGAAGGAG
AGTCGAACCAGTGATGTTGCAGTGTTGGAGGAGCAAGTGCATCAGATGCTTCGCGAGTGG
AAAGCTGAGCTCAATGAGCCGTCTCCAGCTTCTTCTTTGCTTGGTGGTAGTCTTGGGTCA
TTTTCAGCAGATATTAACCGTTTGTTGCAGCGCTGTGAGGAGGAAGATGATGCAACTAGT
GCATTAGTAGAACCTGCAGCATTGAAGCCTGAGCCTGATGTTCAAAGTCTTCAGGCAGGC
AATTCGATGGCCTTTCAAGAGGACTATCTCGTGAATCATGCATCACAAGACCATTGCCTT
CTGGGGTTTGATCAATGCAAAGGCTCTGCATTTGGGTTGCAAAATACAGTGGCTAATAAC
TTGGAGATGACAACTCAGTCAGATTATAATCAGTTTGATATGCATCAAGACTTTGACCAT
GAGCTTTTTATTGGCCCCATGGGGCTGTGTGGACAGGATGGTGTGCCCAACATTCCTGGC
TTGTTGCCAAACATCTGCCCTCCACCATCTGCTTTCTTAGGGCCAAAATGTGCTCTCTGG
GATTGTCCCAGGCCTGCTCAAGGTTCTGAATGGTGTCAGGATTATTGCAGTAGCTTTCAT
GCGAGTCTAGCATTAAATGAAGGCCCCCCAGGTATGACTCCAGTTCTGCGACCTGGGGGC
ATTGGTTTGAAGGATGGTCCTCTATTTGCTGCACTTAGTGCAAAGACACAGGGAAAGGAT
GTTGGCATCCCTGAATGTGAGGGGGCTGCAACTTCGAAATCTCCATGGAATGCTCCTGAG
TTGTTTGATCTTTCTGTTCTTGAAGGTGAAATAATTAGGGAGTGGCTCTTTTTTGATAAG
CCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCAGATTACAGTGGA
CGTGGTTGGCATGAATCAAGGAAACAAGTGATGAAGGAATTTGGGGGATTGAAGAGGTCT
TATTACATGGATCCGCAACCTCTAACCTGTTTTGAGTGGCATCTTTATGAATATGAGATC
AACCACTGTGATGCTTGTGCATTATATAGGTTAGAACTCAAGCTCGTTGATGGAAAGAAG
AGTCCCAAGGGAAAGGTGATAAATGATTCACTTGCTGATCTGCAGAAGCAGATGGGAAGG
CTTACTGCTGAGTTTCCTACTGATGTCAAACGCTCTACCAAGGGCAGGACAAAGGTTAAT
AAAAAGGTTGGTGCCAGAAATATTTATTCTGCTCCTAATCTCATGACTCCTACAGCTGAA
ACTTTCAGTTATGGGCTAAGTGGATCATACAATTATCTTCCTGAGAATTTGGCTGACTAT
TATGTTTATCTTGTGCCTGTTCATGTGCAACTTGAGTTATTCCTGTGTGTTATGTTCTCT
CTCAAAGATGACATATTTGGTGAAATATGA

Peptide Sequence

PEP ID

VIT_12s0028g02670.t01
PEP Infomation

pep chromosome:12X:12:3462915:3470939:-1 gene:VIT_12s0028g02670 transcript:VIT_12s0028g02670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENLPRLRRDWGQVLRRGSMRKGSKSNCKSASHQLFKDKAKNRVDDLQGMFTNLQFARKE
SRTSDVAVLEEQVHQMLREWKAELNEPSPASSLLGGSLGSFSADINRLLQRCEEEDDATS
ALVEPAALKPEPDVQSLQAGNSMAFQEDYLVNHASQDHCLLGFDQCKGSAFGLQNTVANN
LEMTTQSDYNQFDMHQDFDHELFIGPMGLCGQDGVPNIPGLLPNICPPPSAFLGPKCALW
DCPRPAQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKD
VGIPECEGAATSKSPWNAPELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSG
RGWHESRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYRLELKLVDGKK
SPKGKVINDSLADLQKQMGRLTAEFPTDVKRSTKGRTKVNKKVGARNIYSAPNLMTPTAE
TFSYGLSGSYNYLPENLADYYVYLVPVHVQLELFLCVMFSLKDDIFGEI

Transcript Sequence

Transcript ID

VIT_12s0028g02670.t01
Transcript Infomation

cdna chromosome:12X:12:3462915:3470939:-1 gene:VIT_12s0028g02670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCTGAAGCTCTCATCACATTTCTAGGCACCTCCCTCTCCTCAAAGCCTCTCAAAC
CCCCATCTCCAATTTCTTCAATTTGCTGTGGCTGCTGAGAAATCTGGGGAGATTGCAATT
GTTTGCTTATTATTATGATTATTTTTTTTTCTTTTAATTTTGGTTGGGTTCCAAAAATGG
AAAATTTGCCCCGATTGAGACGAGATTGGGGGCAGGTTTTGAGGAGGGGATCAATGAGGA
AGGGTTCGAAGAGTAATTGCAAATCTGCATCACACCAACTTTTCAAGGACAAGGCAAAAA
ACCGGGTTGATGATCTCCAAGGGATGTTCACCAATCTTCAATTTGCTAGGAAGGAGAGTC
GAACCAGTGATGTTGCAGTGTTGGAGGAGCAAGTGCATCAGATGCTTCGCGAGTGGAAAG
CTGAGCTCAATGAGCCGTCTCCAGCTTCTTCTTTGCTTGGTGGTAGTCTTGGGTCATTTT
CAGCAGATATTAACCGTTTGTTGCAGCGCTGTGAGGAGGAAGATGATGCAACTAGTGCAT
TAGTAGAACCTGCAGCATTGAAGCCTGAGCCTGATGTTCAAAGTCTTCAGGCAGGCAATT
CGATGGCCTTTCAAGAGGACTATCTCGTGAATCATGCATCACAAGACCATTGCCTTCTGG
GGTTTGATCAATGCAAAGGCTCTGCATTTGGGTTGCAAAATACAGTGGCTAATAACTTGG
AGATGACAACTCAGTCAGATTATAATCAGTTTGATATGCATCAAGACTTTGACCATGAGC
TTTTTATTGGCCCCATGGGGCTGTGTGGACAGGATGGTGTGCCCAACATTCCTGGCTTGT
TGCCAAACATCTGCCCTCCACCATCTGCTTTCTTAGGGCCAAAATGTGCTCTCTGGGATT
GTCCCAGGCCTGCTCAAGGTTCTGAATGGTGTCAGGATTATTGCAGTAGCTTTCATGCGA
GTCTAGCATTAAATGAAGGCCCCCCAGGTATGACTCCAGTTCTGCGACCTGGGGGCATTG
GTTTGAAGGATGGTCCTCTATTTGCTGCACTTAGTGCAAAGACACAGGGAAAGGATGTTG
GCATCCCTGAATGTGAGGGGGCTGCAACTTCGAAATCTCCATGGAATGCTCCTGAGTTGT
TTGATCTTTCTGTTCTTGAAGGTGAAATAATTAGGGAGTGGCTCTTTTTTGATAAGCCTC
GTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCAGATTACAGTGGACGTG
GTTGGCATGAATCAAGGAAACAAGTGATGAAGGAATTTGGGGGATTGAAGAGGTCTTATT
ACATGGATCCGCAACCTCTAACCTGTTTTGAGTGGCATCTTTATGAATATGAGATCAACC
ACTGTGATGCTTGTGCATTATATAGGTTAGAACTCAAGCTCGTTGATGGAAAGAAGAGTC
CCAAGGGAAAGGTGATAAATGATTCACTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTA
CTGCTGAGTTTCCTACTGATGTCAAACGCTCTACCAAGGGCAGGACAAAGGTTAATAAAA
AGGTTGGTGCCAGAAATATTTATTCTGCTCCTAATCTCATGACTCCTACAGCTGAAACTT
TCAGTTATGGGCTAAGTGGATCATACAATTATCTTCCTGAGAATTTGGCTGACTATTATG
TTTATCTTGTGCCTGTTCATGTGCAACTTGAGTTATTCCTGTGTGTTATGTTCTCTCTCA
AAGATGACATATTTGGTGAAATATGA