Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02570.t01
CDS Infomation

cds chromosome:12X:12:3342166:3345825:-1 gene:VIT_12s0028g02570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAAGAAGCATGCTCTCTTTCTTCTAGCCTTTCTCTTTCTCATGATGCTGATCAAT
GGCGGAAAGGGTCAGGGGGTCGCAGATAACTCTGCCTATGGTCTGGTCTCTGATGGAGTT
GGAGAGGTTCAGCAATCAGCATTTATTGTTTTTAAGAATTGGGCTTCATCAGATAGCTGT
GACCAGACATATGGATTCCTGCCATGCACGACCACTGTGCTGGGAAACATCTTCCTAATC
CTTGTGTATGGTTACTTGATGTTTATTGCAGCCAAGTTTTTGTCTGATGGAAGTGAGATT
CTGCTGGGAATTCTTGGTCCTGGAATTATTGGTGGGCTTTTCCTGCCTGTGCTCAGTGCT
TTTCCTGATGCTGTTATCATCCTTGCATCTGGGCTATCTGGAAGCAAAGAAACAGCTCAA
AGTCAGGTCTCAATTGGTATGGGCTTGCTAGCTGGATCAACTGTTATGCTTCTGACAATA
CTATGGGGATCTTGCATCATAGTTGGCAAGTGTGACATTGAAAATTCAGTGGCTACTGAT
TTGAAAGACACCAGAGGATTCAGCTTAACTGGTTCAGGCGTTAGTACTGATATCTGGGCC
AGCTATGCGGCTCGGATCATGGTTATATCTGTTATTCCATTCATTATAGTCCAAATATCA
CAAGTTCTCCATACAACTTCGCAAGCTCGATTAACAGTCTTGATTTCACTCATTGTCTCT
CTTTCTTTATTGCTTTCATATTGCCTTTATCAGGTCTTTCAGCCTAGGATTCAGAAGAGA
AGACTTGCATATGCAAAGCATAAACATCTAATGTCGGGAATTTTAAAACATTTGAAGTCC
CATATCCTGGGAAGGCTCTTCACTAATAACGGTGAACCTAATACAGAAGCCATAAAAAAG
TTATTTGAGACAATTGATGTAAATTCGAATGGGTACCTCTCTGTTACTGATATAAGAGCC
CTGATAATAGGGATCCAGTTTGATGCAGCGGATTTGGATATTGATGAAACTGTGAAAAGT
GTAATGAAAGATTTTGATACAACGGGGGATTCCCAAATTGATATGAATGAGTTTGTCAGA
GGAATGTCAAGATGGCTTACTAAGGCTAAGCGTTCAGCAATTCATGCTGGCAGTGATGGC
AGTAATTCCCTGTCAACAAGATATATAAATGACTTCAATCTGCGAACAAGAGAGGAGCAG
GATAAGTTGGAGGATCAGAATGAAGAGGAGGAAGTGGAGAGCATTAAAAATCCCAAGTGG
AATGCCTCTAAAGCAGTAGCCATGTTGCTTTTGGGCACAGTTGTTGCTGCTATATTTGCC
GATCCCCTTGTTGATGCTGTTGACAACTTCTCCACTGCTACAAGCATCCCTTCTTTCTTT
GTCTCATTTGTTGTTCTTCCTTTTGCTAGCTCCAGTGAAGCAGTATCAGCCATGATCTTT
GCCAGCAGAAAGAAGTTGAGGACTGCTTCTTTAACATTTTCTGAGATTTATGGGTCAGTG
ACAATGGGCAACATCCTTAGCTTGTCTGTCTTCTTGGGTCTCATCTACTTTCGCCAGTTG
ACATGGGACTTCGCATCTGAGGTGCTGATTATTCTGATAGTATGCATACTGATGGGAGTC
TTTGCTGGTACCCGTACAACTTTCCCTCTTTGGACAAGCTTGATGGCCTTCCTGCTTTAC
CCATTATCCTTGGTGTTGGTGTATGTTCTTGACAATTATTTGGGATGGTCATAG

Peptide Sequence

PEP ID

VIT_12s0028g02570.t01
PEP Infomation

pep chromosome:12X:12:3342166:3345825:-1 gene:VIT_12s0028g02570 transcript:VIT_12s0028g02570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKKHALFLLAFLFLMMLINGGKGQGVADNSAYGLVSDGVGEVQQSAFIVFKNWASSDSC
DQTYGFLPCTTTVLGNIFLILVYGYLMFIAAKFLSDGSEILLGILGPGIIGGLFLPVLSA
FPDAVIILASGLSGSKETAQSQVSIGMGLLAGSTVMLLTILWGSCIIVGKCDIENSVATD
LKDTRGFSLTGSGVSTDIWASYAARIMVISVIPFIIVQISQVLHTTSQARLTVLISLIVS
LSLLLSYCLYQVFQPRIQKRRLAYAKHKHLMSGILKHLKSHILGRLFTNNGEPNTEAIKK
LFETIDVNSNGYLSVTDIRALIIGIQFDAADLDIDETVKSVMKDFDTTGDSQIDMNEFVR
GMSRWLTKAKRSAIHAGSDGSNSLSTRYINDFNLRTREEQDKLEDQNEEEEVESIKNPKW
NASKAVAMLLLGTVVAAIFADPLVDAVDNFSTATSIPSFFVSFVVLPFASSSEAVSAMIF
ASRKKLRTASLTFSEIYGSVTMGNILSLSVFLGLIYFRQLTWDFASEVLIILIVCILMGV
FAGTRTTFPLWTSLMAFLLYPLSLVLVYVLDNYLGWS

Transcript Sequence

Transcript ID

VIT_12s0028g02570.t01
Transcript Infomation

cdna chromosome:12X:12:3342166:3345825:-1 gene:VIT_12s0028g02570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCTACAAGTTCTCCAAGTATGAGGCATGTTTTAAGGCAATGTGGAAAAGAACCAGAAGA
CACCTAACATATTAGCTTCTGATCACAAAGCCAAGCTCAGCCATGGCAAAGAAGCATGCT
CTCTTTCTTCTAGCCTTTCTCTTTCTCATGATGCTGATCAATGGCGGAAAGGGTCAGGGG
GTCGCAGATAACTCTGCCTATGGTCTGGTCTCTGATGGAGTTGGAGAGGTTCAGCAATCA
GCATTTATTGTTTTTAAGAATTGGGCTTCATCAGATAGCTGTGACCAGACATATGGATTC
CTGCCATGCACGACCACTGTGCTGGGAAACATCTTCCTAATCCTTGTGTATGGTTACTTG
ATGTTTATTGCAGCCAAGTTTTTGTCTGATGGAAGTGAGATTCTGCTGGGAATTCTTGGT
CCTGGAATTATTGGTGGGCTTTTCCTGCCTGTGCTCAGTGCTTTTCCTGATGCTGTTATC
ATCCTTGCATCTGGGCTATCTGGAAGCAAAGAAACAGCTCAAAGTCAGGTCTCAATTGGT
ATGGGCTTGCTAGCTGGATCAACTGTTATGCTTCTGACAATACTATGGGGATCTTGCATC
ATAGTTGGCAAGTGTGACATTGAAAATTCAGTGGCTACTGATTTGAAAGACACCAGAGGA
TTCAGCTTAACTGGTTCAGGCGTTAGTACTGATATCTGGGCCAGCTATGCGGCTCGGATC
ATGGTTATATCTGTTATTCCATTCATTATAGTCCAAATATCACAAGTTCTCCATACAACT
TCGCAAGCTCGATTAACAGTCTTGATTTCACTCATTGTCTCTCTTTCTTTATTGCTTTCA
TATTGCCTTTATCAGGTCTTTCAGCCTAGGATTCAGAAGAGAAGACTTGCATATGCAAAG
CATAAACATCTAATGTCGGGAATTTTAAAACATTTGAAGTCCCATATCCTGGGAAGGCTC
TTCACTAATAACGGTGAACCTAATACAGAAGCCATAAAAAAGTTATTTGAGACAATTGAT
GTAAATTCGAATGGGTACCTCTCTGTTACTGATATAAGAGCCCTGATAATAGGGATCCAG
TTTGATGCAGCGGATTTGGATATTGATGAAACTGTGAAAAGTGTAATGAAAGATTTTGAT
ACAACGGGGGATTCCCAAATTGATATGAATGAGTTTGTCAGAGGAATGTCAAGATGGCTT
ACTAAGGCTAAGCGTTCAGCAATTCATGCTGGCAGTGATGGCAGTAATTCCCTGTCAACA
AGATATATAAATGACTTCAATCTGCGAACAAGAGAGGAGCAGGATAAGTTGGAGGATCAG
AATGAAGAGGAGGAAGTGGAGAGCATTAAAAATCCCAAGTGGAATGCCTCTAAAGCAGTA
GCCATGTTGCTTTTGGGCACAGTTGTTGCTGCTATATTTGCCGATCCCCTTGTTGATGCT
GTTGACAACTTCTCCACTGCTACAAGCATCCCTTCTTTCTTTGTCTCATTTGTTGTTCTT
CCTTTTGCTAGCTCCAGTGAAGCAGTATCAGCCATGATCTTTGCCAGCAGAAAGAAGTTG
AGGACTGCTTCTTTAACATTTTCTGAGATTTATGGGTCAGTGACAATGGGCAACATCCTT
AGCTTGTCTGTCTTCTTGGGTCTCATCTACTTTCGCCAGTTGACATGGGACTTCGCATCT
GAGGTGCTGATTATTCTGATAGTATGCATACTGATGGGAGTCTTTGCTGGTACCCGTACA
ACTTTCCCTCTTTGGACAAGCTTGATGGCCTTCCTGCTTTACCCATTATCCTTGGTGTTG
GTGTATGTTCTTGACAATTATTTGGGATGGTCATAGACACAT