Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02440.t01
CDS Infomation

cds chromosome:12X:12:3172660:3175000:1 gene:VIT_12s0028g02440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCTGTTGTTCAAACCCATGTTCCTCTCTTTACTGTTGTTTCTGCTTTGGCACCAA
ACCGAAGGGGAGAATTTCAGTAATGCAAACACTACCAGGCTCTCCAGAGCTAGAGAGCTT
GCTGGTAGGTGCAATTTCTTTAGAGGTAAATGGGTCTATGACTCTTCTTATCCTCTCTAT
GATTCTTCAAGCTGCCCCTTCATAGATCCAGAATTTGACTGCATCAAGTATGGCAGACCT
GATAAACAGTACCTCAAATATAGGTGGCAGCCCCTTTCCTGCAACTTACCAAGGTTTAAT
GGGCTGGATTTCTTGGAGAGGTGGAGGGGGAAGAGGATAATGTTTGTGGGAGACTCGCTG
AGTTTCAACCAGTGGCAGTCTCTATCATGTATGATACACTCATCGGTACCCAACGCCAGG
ACCTCTCTGATGAAGAGCGGGCCTCTTTCTTCACTCACATTTGAGGACTATGGGGTGAAG
TTGATGCTGTACCGTACAACCTACCTAGTGGATTTGGTGAGGGAAAACGTGGGGCGAGTA
TTGAAGCTTGACTCAATCCAAAGCGGTAATGCATGGAAGGGCATGGACATGCTGATCTTC
AACACGTGGCACTGGTGGACCCACACCGGAAGAACACAGCCATGGGATTACGTGCAAGAG
GGGAATAAGCTGTACAAGGATATGAACCGTCTGATTGCATATTATAAAGGGCTGACCACA
TGGGCGAGGTGGGTCAACATCAACGTTGACCCTTCCAAAACCAAAGTCTTCTTTCAGGGC
ATTTCTCCCACCCATTATGAGGGAAAGGACTGGAACCAGCCATCAAGGTCATGTGATGGA
GAAATGCAGCCATACTTCGGCGCAAGCTACCCAGCCGGCATACCCATGGCCGCGGTGGTG
GTCAACAAAGTCCTAAGTCGGATTAAGAAGCCTGTATATTTACTTGATGTCACCACTCTC
TCGCAATATCGCATAGACGCACACCCGTCCGACTATAGCGGCGAGCATGGTGGCATCACC
GACTGCAGCCACTGGTGCCTTCCTGGCCTGCCCGACACTTGGAATCAACTCTTATATGCC
GCTCTTGTTAGCTAG

Peptide Sequence

PEP ID

VIT_12s0028g02440.t01
PEP Infomation

pep chromosome:12X:12:3172660:3175000:1 gene:VIT_12s0028g02440 transcript:VIT_12s0028g02440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGLLFKPMFLSLLLFLLWHQTEGENFSNANTTRLSRARELAGRCNFFRGKWVYDSSYPLY
DSSSCPFIDPEFDCIKYGRPDKQYLKYRWQPLSCNLPRFNGLDFLERWRGKRIMFVGDSL
SFNQWQSLSCMIHSSVPNARTSLMKSGPLSSLTFEDYGVKLMLYRTTYLVDLVRENVGRV
LKLDSIQSGNAWKGMDMLIFNTWHWWTHTGRTQPWDYVQEGNKLYKDMNRLIAYYKGLTT
WARWVNINVDPSKTKVFFQGISPTHYEGKDWNQPSRSCDGEMQPYFGASYPAGIPMAAVV
VNKVLSRIKKPVYLLDVTTLSQYRIDAHPSDYSGEHGGITDCSHWCLPGLPDTWNQLLYA
ALVS

Transcript Sequence

Transcript ID

VIT_12s0028g02440.t01
Transcript Infomation

cdna chromosome:12X:12:3172660:3175000:1 gene:VIT_12s0028g02440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCGAAATCCAAGATGGGTCTGTTGTTCAAACCCATGTTCCTCTCTTTACTGTTGTTTCT
GCTTTGGCACCAAACCGAAGGGGAGAATTTCAGTAATGCAAACACTACCAGGCTCTCCAG
AGCTAGAGAGCTTGCTGGTAGGTGCAATTTCTTTAGAGGTAAATGGGTCTATGACTCTTC
TTATCCTCTCTATGATTCTTCAAGCTGCCCCTTCATAGATCCAGAATTTGACTGCATCAA
GTATGGCAGACCTGATAAACAGTACCTCAAATATAGGTGGCAGCCCCTTTCCTGCAACTT
ACCAAGGTTTAATGGGCTGGATTTCTTGGAGAGGTGGAGGGGGAAGAGGATAATGTTTGT
GGGAGACTCGCTGAGTTTCAACCAGTGGCAGTCTCTATCATGTATGATACACTCATCGGT
ACCCAACGCCAGGACCTCTCTGATGAAGAGCGGGCCTCTTTCTTCACTCACATTTGAGGA
CTATGGGGTGAAGTTGATGCTGTACCGTACAACCTACCTAGTGGATTTGGTGAGGGAAAA
CGTGGGGCGAGTATTGAAGCTTGACTCAATCCAAAGCGGTAATGCATGGAAGGGCATGGA
CATGCTGATCTTCAACACGTGGCACTGGTGGACCCACACCGGAAGAACACAGCCATGGGA
TTACGTGCAAGAGGGGAATAAGCTGTACAAGGATATGAACCGTCTGATTGCATATTATAA
AGGGCTGACCACATGGGCGAGGTGGGTCAACATCAACGTTGACCCTTCCAAAACCAAAGT
CTTCTTTCAGGGCATTTCTCCCACCCATTATGAGGGAAAGGACTGGAACCAGCCATCAAG
GTCATGTGATGGAGAAATGCAGCCATACTTCGGCGCAAGCTACCCAGCCGGCATACCCAT
GGCCGCGGTGGTGGTCAACAAAGTCCTAAGTCGGATTAAGAAGCCTGTATATTTACTTGA
TGTCACCACTCTCTCGCAATATCGCATAGACGCACACCCGTCCGACTATAGCGGCGAGCA
TGGTGGCATCACCGACTGCAGCCACTGGTGCCTTCCTGGCCTGCCCGACACTTGGAATCA
ACTCTTATATGCCGCTCTTGTTAGCTAGAGCTACATCGTCATTTATGATTAATTTCATCT
TGTTAGTACTTTTGTTCACAATTGGAAGGGAAAAAAAAAAAAAAAAATCATTGTTTAGGC
ATTAGGGGTTTTCCAATAAGAGGGTTGAATTGATTCATCATTGATGATATGGTTTAATTG
TAAAGAAATATATTATTATGGCATCAAGTTGCCTTGATCTTAAGAAATGTATCTCTAGCA
ATTTTG