Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g02100.t01
CDS Infomation

cds chromosome:12X:12:2794561:2804179:-1 gene:VIT_12s0028g02100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATCAAATCACAAGCCGCAGCATCTTCAATCTCTCGTCTCATTTTTAGTAAAATC
ATCTTCAAGAAACCCCCTATCAAACCACTCTCCACTTTCCCTCACTTTCCTACCGCCCAA
ACACCCCATTTTCCGTTTCCTGGAACCAGTCGATTCTTCTCATCGGCTCGAACAGTGCAA
GAGCTTCTCGCTGAAGTAGAGCGCGAAAAGCAGAGGGAGAAAGAGCAGAGGAAAAGAGCG
GGCCTCGATGTGAAGGAGATTGAGGATGAAGACGAAGAGGACTACATGGGCGTTGGCCCA
TTGATCGAGAAGCTTGAGAAGGAGAAGCTGAAGAGTAGCGGCGATCTCAACATGTACGAA
GAGCGTACCGATTCCGACAGCGACGAGGATGACGAGAGGTTCACCACCGAGGCCGTCAAG
AAGCGCGCGGAGGTGTTTGAGAAGAAGTTCAAGAGGCATGGGGAGCTACTCAATAACTTC
GCTGAGGCCGAGACACTTGATGATGCTTTCAAGTGGATGACTAGAATCGACAAGTTTGAG
CAAAAACATCTCCAGCTCCGCCCAGAATACAGGGTTATTGGTGAATTGATGAACCGTCTT
AAAGAAGCAGAAGGCAAGGATAAGTTCATTCTTCAACAGAAGCTTAATAGGGCAGTAAGG
TTAATTGAGTGGAAGGAAGCTTATGATCCTAACAATCCTGCCAATTACGGATACATACAG
CATCAACAAGTGGGACCCAATGTTGATCTTCTGGAACATGCTGGGTTTGAGAAGGAGAAG
CAAATGATTCAAGGGGCTGAGATGGATGAAGATGATGATGGTGAGTTTGATGACATGAAA
GAGAGAGATGATATATTGTTAGAGAAGCTTAATGCCATTGACAAGAAACTTGAAGAGAAA
TTGGCGGAGTTGGATCATACATTTGGTAAAAAGGGGAAACTTCTAGAGGAGGAGATCCGA
GATCTGGCAGAGGAGAGGAACTCTTTGACAGAGAAGAAAAGAAGACCTCTTTATAGAAAA
GGCTTTGATGTGAAGCTGATTGATGTAAATCGAACATGTAAAGTTACAAAGGGGGGGCAA
GTGGTCAAGTACACCGCTATATTAGCTTGTGGGAACTATCATGGTGTTGTTGGTTATGCA
AAAGCAAAAGGCCCAGCAATTCCAATTGCCCTCCAGAAGGCATATGAGAAATGCTTTCAA
AATCTCCATTATGTTGAACGATATGAGGAGCATACGATTGCTCATGCAGTACAGACAACA
TATAAGAAAACCAAGGTGTATCTCTGGCCTGCACAAACTACCACAGGCATGAAAGCAGGC
AGAACTGTCCAAACCATTTTGAATTTAGCTGGTTTCAAAAATGTCAAATCCAAGGTAATT
GGTTCAAGGAATCCCCATAACACAGTTAAGGCTCTGTTCAAGGCTCTCAATGCTATTGAA
ACTCCCAAAGATGTTCAAGAGAAGTTTGGTCGGACGGTTGTGGAGAAGTACTTGCTGTGA

Peptide Sequence

PEP ID

VIT_12s0028g02100.t01
PEP Infomation

pep chromosome:12X:12:2794561:2804179:-1 gene:VIT_12s0028g02100 transcript:VIT_12s0028g02100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIKSQAAASSISRLIFSKIIFKKPPIKPLSTFPHFPTAQTPHFPFPGTSRFFSSARTVQ
ELLAEVEREKQREKEQRKRAGLDVKEIEDEDEEDYMGVGPLIEKLEKEKLKSSGDLNMYE
ERTDSDSDEDDERFTTEAVKKRAEVFEKKFKRHGELLNNFAEAETLDDAFKWMTRIDKFE
QKHLQLRPEYRVIGELMNRLKEAEGKDKFILQQKLNRAVRLIEWKEAYDPNNPANYGYIQ
HQQVGPNVDLLEHAGFEKEKQMIQGAEMDEDDDGEFDDMKERDDILLEKLNAIDKKLEEK
LAELDHTFGKKGKLLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGQ
VVKYTAILACGNYHGVVGYAKAKGPAIPIALQKAYEKCFQNLHYVERYEEHTIAHAVQTT
YKKTKVYLWPAQTTTGMKAGRTVQTILNLAGFKNVKSKVIGSRNPHNTVKALFKALNAIE
TPKDVQEKFGRTVVEKYLL

Transcript Sequence

Transcript ID

VIT_12s0028g02100.t01
Transcript Infomation

cdna chromosome:12X:12:2794561:2804179:-1 gene:VIT_12s0028g02100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCAATGATTCCGTAACAATGGCGATCAAATCACAAGCCGCAGCATCTTCAATCTCTCGT
CTCATTTTTAGTAAAATCATCTTCAAGAAACCCCCTATCAAACCACTCTCCACTTTCCCT
CACTTTCCTACCGCCCAAACACCCCATTTTCCGTTTCCTGGAACCAGTCGATTCTTCTCA
TCGGCTCGAACAGTGCAAGAGCTTCTCGCTGAAGTAGAGCGCGAAAAGCAGAGGGAGAAA
GAGCAGAGGAAAAGAGCGGGCCTCGATGTGAAGGAGATTGAGGATGAAGACGAAGAGGAC
TACATGGGCGTTGGCCCATTGATCGAGAAGCTTGAGAAGGAGAAGCTGAAGAGTAGCGGC
GATCTCAACATGTACGAAGAGCGTACCGATTCCGACAGCGACGAGGATGACGAGAGGTTC
ACCACCGAGGCCGTCAAGAAGCGCGCGGAGGTGTTTGAGAAGAAGTTCAAGAGGCATGGG
GAGCTACTCAATAACTTCGCTGAGGCCGAGACACTTGATGATGCTTTCAAGTGGATGACT
AGAATCGACAAGTTTGAGCAAAAACATCTCCAGCTCCGCCCAGAATACAGGGTTATTGGT
GAATTGATGAACCGTCTTAAAGAAGCAGAAGGCAAGGATAAGTTCATTCTTCAACAGAAG
CTTAATAGGGCAGTAAGGTTAATTGAGTGGAAGGAAGCTTATGATCCTAACAATCCTGCC
AATTACGGATACATACAGCATCAACAAGTGGGACCCAATGTTGATCTTCTGGAACATGCT
GGGTTTGAGAAGGAGAAGCAAATGATTCAAGGGGCTGAGATGGATGAAGATGATGATGGT
GAGTTTGATGACATGAAAGAGAGAGATGATATATTGTTAGAGAAGCTTAATGCCATTGAC
AAGAAACTTGAAGAGAAATTGGCGGAGTTGGATCATACATTTGGTAAAAAGGGGAAACTT
CTAGAGGAGGAGATCCGAGATCTGGCAGAGGAGAGGAACTCTTTGACAGAGAAGAAAAGA
AGACCTCTTTATAGAAAAGGCTTTGATGTGAAGCTGATTGATGTAAATCGAACATGTAAA
GTTACAAAGGGGGGGCAAGTGGTCAAGTACACCGCTATATTAGCTTGTGGGAACTATCAT
GGTGTTGTTGGTTATGCAAAAGCAAAAGGCCCAGCAATTCCAATTGCCCTCCAGAAGGCA
TATGAGAAATGCTTTCAAAATCTCCATTATGTTGAACGATATGAGGAGCATACGATTGCT
CATGCAGTACAGACAACATATAAGAAAACCAAGGTGTATCTCTGGCCTGCACAAACTACC
ACAGGCATGAAAGCAGGCAGAACTGTCCAAACCATTTTGAATTTAGCTGGTTTCAAAAAT
GTCAAATCCAAGGTAATTGGTTCAAGGAATCCCCATAACACAGTTAAGGCTCTGTTCAAG
GCTCTCAATGCTATTGAAACTCCCAAAGATGTTCAAGAGAAGTTTGGTCGGACGGTTGTG
GAGAAGTACTTGCTGTGATAATCTTGAGGCAGATATTTTGTCTTGGATTTCAGAGGGTTC
AGATGATGAGGAAAATGAAAATTTTGTTACACATTCTTTTCCCTTGAATGACATATTTTT
CCCCCTTAAAATGGGTAAAGGGGAAAGATGGAAATGGGGAACTTGGTGCGAAAGTAGTGC
ATTTCCAGGATAGAAAACAAACCCAGAGACCCTGGGGAGTAAAAACCTAGGAATTTCCAA
CCTTCTACAAACCGGTTCTTTTTAGGTATATTTCTTAGATGATCTTTTTCCTCCTTATTC
AGGGCCCTTTTATTTTCCTCCCCATTTTCATCCTTCTTGTACTGTTTCATGCTGCTGAAA
CCTTTTTGGCTGCACAGTCTTATCCAGAGTACCTTTTTACTTGAATAAAATGTTTTTAGA
TTATTTGCTGCACA