Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01940.t01
CDS Infomation

cds chromosome:12X:12:2573979:2575626:1 gene:VIT_12s0028g01940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTGGCAAACGGTGAGATATCAGCTGAGCTGCTTCATGCTCAAGCTCATGTCTGG
AACCATATATTCAACTTCATAAAGTCTATGTCACTAAAATGTGCTACTCAACTAGGCATC
CCAGACATCATCCACAACCATGGCAAGCCCATGACTCTTCCTGAGCTGGTCGCTAAGCTC
CCAGTCCACCCTAAAAGGAGTCAGTGCGTGTACCGTCTCATGCGCATTCTTGTTCATTCT
GGCTTCCTTGCTGCGCAAAGAGTCCAACAAGGTGAGGAAGAAGAGGGGTATGTGCTTACA
GATGCCTCTAGGCTCCTTCTAATGGATGACTCCTTGAGCATAAGGCCCTTGGTGCTTGCC
ATGCTCGACCCAATTTTAACTAAACCATGGCATTATCTGAGTGCTTGGTTTCAAAATGAT
GATCCCACTCCGTTCCACACTGCTTATGAGCGGCCATTTTGGGATTATGCCGGCCATGAA
CCTCAGCTCAACAATTCCTTCAATGAAGCCATGGCTAGCGATGCTCGCTTACTCACCAGC
GTGCTGCTTAAGGAGGGCAAGGGCGTATTTGCGGGGTTGAACTCATTAGTTGATGTAGGG
GGTGGCACCGGAAAAGTGGCCAAGGCCATTGCTAACGCTTTCCCACATTTGAACTGCACC
GTGTTAGATCTCCCCCACGTGGTTGCTGGCTTGCAAGGGAGCAAGAACTTGAACTACTTT
GCAGGTGATATGTTTGAGGCAATTCCTCCTGCAGATGCAATTTTACTCAAGTGGATACTG
CACGACTGGAGCGATGAAGAATGCGTGAAGATACTAAAGCGATGCAGGGAAGCAATTCCG
AGCAAGGAAAACGGAGGAAAGGTGATTATCATAGACATGATCATGATGAAGAATCAAGGA
GACTACAAGTCCACAGAAACACAGCTGTTCTTTGATATGACGATGATGATTTTCGCCGCG
GGTAGAGAGAGGGACGAGAACGAATGGGAGAAGCTATTCTTGGATGCTGGTTTCAGTCAC
TACAAGATAACTCCCATTTTGGGTTTGAGGTCCCTCATTGAGGTTTATCCTTGA

Peptide Sequence

PEP ID

VIT_12s0028g01940.t01
PEP Infomation

pep chromosome:12X:12:2573979:2575626:1 gene:VIT_12s0028g01940 transcript:VIT_12s0028g01940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLANGEISAELLHAQAHVWNHIFNFIKSMSLKCATQLGIPDIIHNHGKPMTLPELVAKL
PVHPKRSQCVYRLMRILVHSGFLAAQRVQQGEEEEGYVLTDASRLLLMDDSLSIRPLVLA
MLDPILTKPWHYLSAWFQNDDPTPFHTAYERPFWDYAGHEPQLNNSFNEAMASDARLLTS
VLLKEGKGVFAGLNSLVDVGGGTGKVAKAIANAFPHLNCTVLDLPHVVAGLQGSKNLNYF
AGDMFEAIPPADAILLKWILHDWSDEECVKILKRCREAIPSKENGGKVIIIDMIMMKNQG
DYKSTETQLFFDMTMMIFAAGRERDENEWEKLFLDAGFSHYKITPILGLRSLIEVYP

Transcript Sequence

Transcript ID

VIT_12s0028g01940.t01
Transcript Infomation

cdna chromosome:12X:12:2573979:2575626:1 gene:VIT_12s0028g01940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGGTAAGAGATCGGTGTGAGATACATGGATTTGGCAAACGGTGAGATATCAGCTGAGCT
GCTTCATGCTCAAGCTCATGTCTGGAACCATATATTCAACTTCATAAAGTCTATGTCACT
AAAATGTGCTACTCAACTAGGCATCCCAGACATCATCCACAACCATGGCAAGCCCATGAC
TCTTCCTGAGCTGGTCGCTAAGCTCCCAGTCCACCCTAAAAGGAGTCAGTGCGTGTACCG
TCTCATGCGCATTCTTGTTCATTCTGGCTTCCTTGCTGCGCAAAGAGTCCAACAAGGTGA
GGAAGAAGAGGGGTATGTGCTTACAGATGCCTCTAGGCTCCTTCTAATGGATGACTCCTT
GAGCATAAGGCCCTTGGTGCTTGCCATGCTCGACCCAATTTTAACTAAACCATGGCATTA
TCTGAGTGCTTGGTTTCAAAATGATGATCCCACTCCGTTCCACACTGCTTATGAGCGGCC
ATTTTGGGATTATGCCGGCCATGAACCTCAGCTCAACAATTCCTTCAATGAAGCCATGGC
TAGCGATGCTCGCTTACTCACCAGCGTGCTGCTTAAGGAGGGCAAGGGCGTATTTGCGGG
GTTGAACTCATTAGTTGATGTAGGGGGTGGCACCGGAAAAGTGGCCAAGGCCATTGCTAA
CGCTTTCCCACATTTGAACTGCACCGTGTTAGATCTCCCCCACGTGGTTGCTGGCTTGCA
AGGGAGCAAGAACTTGAACTACTTTGCAGGTGATATGTTTGAGGCAATTCCTCCTGCAGA
TGCAATTTTACTCAAGTGGATACTGCACGACTGGAGCGATGAAGAATGCGTGAAGATACT
AAAGCGATGCAGGGAAGCAATTCCGAGCAAGGAAAACGGAGGAAAGGTGATTATCATAGA
CATGATCATGATGAAGAATCAAGGAGACTACAAGTCCACAGAAACACAGCTGTTCTTTGA
TATGACGATGATGATTTTCGCCGCGGGTAGAGAGAGGGACGAGAACGAATGGGAGAAGCT
ATTCTTGGATGCTGGTTTCAGTCACTACAAGATAACTCCCATTTTGGGTTTGAGGTCCCT
CATTGAGGTTTATCCTTGATGCTCTATTTGTTTGTAGGATGGCAAATTTATGCATGGTTA
ATTCACAAAGTCTGCTGAGATTAAGATGGTTCTTGCTCCGTTTGATTGGGCAGAAGTACT
GTTCATCTTTGTTGTACGAATTTCAATAATAATAATGAATTTCTTCATATAATCTACGTG
TTTGTTTTGGAGTAATGAATTATTATTTTCTGTAATATTAAATT