Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01790.t01
CDS Infomation

cds chromosome:12X:12:2413863:2415500:-1 gene:VIT_12s0028g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCTTCATGCCGTCTCTTACAAAGACCAAATGGGTGCTTCAAGCTCTGCAATATTT
TTACCTTTTGTAAGCCTTGTGGTTTTAGTTTCATGGGCAACTTCAAGTTCAATCCATGAA
AACTTTCTGCAATGTCTTTCCCTTAATTCTAACCACACAACACCCATCTCAAATGTCCTG
TACACCCCAAAAAATTTGTCTTATTCAGCCATATTGGAATCCACCATAGAGAACCTCAGA
TTCTCATCCTCTGCTACCCCAAAACCCCTGCTTATACTTACCCCACTGCATGTCTCCCAC
ATCCAAGCAGCTGTTATTTGTTCCAAGAAATATGGCATGAACATCAGAGTCCGAAGTGGC
GGCCATGACTATGAGGGTCTCTCTTATGTATCTGAAATCCCTTTCATCATTATTGATTTG
GTGGAACTTCGATCCATCAATATTAGCATCGAAGATGGCACTGCTTGGGTAGAGGCTGGA
GCAACTGTCGGTGAAGTTTATTATAGAATTGCCCAAAAAAGTAGGACCTATGGCTTCCCA
GCAGGCAGCTGTCCTACTGTAGGAGTGGGTGGGCACTTCAGCGGTGGGGGTTATGGGACT
TTGATGAGAAAGTATGGCCTATCAGCTGATAATATAATTGATGCTTACATTGTTGTTAGT
GATGGCAGAGTTCTCAACAGAGAATCGATGGGAGAAGACTTGTTTTGGGCTATTAGAGGG
GGTGGAGGAGCAAGTTTTGGAATCATCTTGTCATGGAAAATCAAACTAGTTCCTGTTCCG
CCTATTGTGACCGTCTTCACTGTTGGCAGGACCTTGGAACAAGGTGCACTCAAGGTCTTT
CTTAAATGGCAACAAGTTGGTAGTAGACTCCAGGAAGATATCTTCATCGGAGCCACCTTT
GGGGCTGTCAGTGGCAGCCAAGAAGGGGAGAGAACAATAGAAGTTTCATTCAAAAGTCTA
TTTCTTGGTAATACTAGTCAACTGTTATCACTGATGAAAAAGAGCTTCCCTGAGCTGGGC
TTGGAGGCCAAGGACTGTCTTGAAATGAGTTGGATAGAGTCCGTGCTTTATTACACAGAC
CTTTCTGGAGAACCTGTAAATGTTTTGCTCAACAGGATTCCTCAATTTAAAAACTACTTC
AAGGCAAAATCAGACTATGTGCAGGAGCCAATTTCTGAAACTGGGTTACAAGGTGTATGG
AAGATGCTTTACCAGGAAGAGGCAGGGATAATGATCTTAAGTCCTTATGGTGGAAGGATG
AACGAGATTTCAGAGACTGAAGTTCCTTTCCCGCATAGAAAGGGGAACTTGTATAAAATT
CAATACTTGGTCAGCTGGGATGAAGAAGGGGATAGAGTGTCACAGAAGCGCATAAATTGG
ATAAGAAAGCTTTATGCATACATGGCTCCATATGTTTCCAAGTTCCCCAGGGCTGCATAT
CTCAATTATAGGGATCTTGACTTGGGAATAAACAAGCTCAAAGGTAACACAAGCTATGCA
CAGGCCAGCATTTGGGGCATTAAGTACTTCAGCTGCAATTTCAATAGATTGGTTCATGTG
AAAACCAAAGTGGATCCAAGTAATTTCTTCAGGAATGAACAGAGCATCCCATCTCTTTCC
CCATGGTGGAAGAACTGA

Peptide Sequence

PEP ID

VIT_12s0028g01790.t01
PEP Infomation

pep chromosome:12X:12:2413863:2415500:-1 gene:VIT_12s0028g01790 transcript:VIT_12s0028g01790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGLHAVSYKDQMGASSSAIFLPFVSLVVLVSWATSSSIHENFLQCLSLNSNHTTPISNVL
YTPKNLSYSAILESTIENLRFSSSATPKPLLILTPLHVSHIQAAVICSKKYGMNIRVRSG
GHDYEGLSYVSEIPFIIIDLVELRSINISIEDGTAWVEAGATVGEVYYRIAQKSRTYGFP
AGSCPTVGVGGHFSGGGYGTLMRKYGLSADNIIDAYIVVSDGRVLNRESMGEDLFWAIRG
GGGASFGIILSWKIKLVPVPPIVTVFTVGRTLEQGALKVFLKWQQVGSRLQEDIFIGATF
GAVSGSQEGERTIEVSFKSLFLGNTSQLLSLMKKSFPELGLEAKDCLEMSWIESVLYYTD
LSGEPVNVLLNRIPQFKNYFKAKSDYVQEPISETGLQGVWKMLYQEEAGIMILSPYGGRM
NEISETEVPFPHRKGNLYKIQYLVSWDEEGDRVSQKRINWIRKLYAYMAPYVSKFPRAAY
LNYRDLDLGINKLKGNTSYAQASIWGIKYFSCNFNRLVHVKTKVDPSNFFRNEQSIPSLS
PWWKN

Transcript Sequence

Transcript ID

VIT_12s0028g01790.t01
Transcript Infomation

cdna chromosome:12X:12:2413863:2415500:-1 gene:VIT_12s0028g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCTTCATGCCGTCTCTTACAAAGACCAAATGGGTGCTTCAAGCTCTGCAATATTT
TTACCTTTTGTAAGCCTTGTGGTTTTAGTTTCATGGGCAACTTCAAGTTCAATCCATGAA
AACTTTCTGCAATGTCTTTCCCTTAATTCTAACCACACAACACCCATCTCAAATGTCCTG
TACACCCCAAAAAATTTGTCTTATTCAGCCATATTGGAATCCACCATAGAGAACCTCAGA
TTCTCATCCTCTGCTACCCCAAAACCCCTGCTTATACTTACCCCACTGCATGTCTCCCAC
ATCCAAGCAGCTGTTATTTGTTCCAAGAAATATGGCATGAACATCAGAGTCCGAAGTGGC
GGCCATGACTATGAGGGTCTCTCTTATGTATCTGAAATCCCTTTCATCATTATTGATTTG
GTGGAACTTCGATCCATCAATATTAGCATCGAAGATGGCACTGCTTGGGTAGAGGCTGGA
GCAACTGTCGGTGAAGTTTATTATAGAATTGCCCAAAAAAGTAGGACCTATGGCTTCCCA
GCAGGCAGCTGTCCTACTGTAGGAGTGGGTGGGCACTTCAGCGGTGGGGGTTATGGGACT
TTGATGAGAAAGTATGGCCTATCAGCTGATAATATAATTGATGCTTACATTGTTGTTAGT
GATGGCAGAGTTCTCAACAGAGAATCGATGGGAGAAGACTTGTTTTGGGCTATTAGAGGG
GGTGGAGGAGCAAGTTTTGGAATCATCTTGTCATGGAAAATCAAACTAGTTCCTGTTCCG
CCTATTGTGACCGTCTTCACTGTTGGCAGGACCTTGGAACAAGGTGCACTCAAGGTCTTT
CTTAAATGGCAACAAGTTGGTAGTAGACTCCAGGAAGATATCTTCATCGGAGCCACCTTT
GGGGCTGTCAGTGGCAGCCAAGAAGGGGAGAGAACAATAGAAGTTTCATTCAAAAGTCTA
TTTCTTGGTAATACTAGTCAACTGTTATCACTGATGAAAAAGAGCTTCCCTGAGCTGGGC
TTGGAGGCCAAGGACTGTCTTGAAATGAGTTGGATAGAGTCCGTGCTTTATTACACAGAC
CTTTCTGGAGAACCTGTAAATGTTTTGCTCAACAGGATTCCTCAATTTAAAAACTACTTC
AAGGCAAAATCAGACTATGTGCAGGAGCCAATTTCTGAAACTGGGTTACAAGGTGTATGG
AAGATGCTTTACCAGGAAGAGGCAGGGATAATGATCTTAAGTCCTTATGGTGGAAGGATG
AACGAGATTTCAGAGACTGAAGTTCCTTTCCCGCATAGAAAGGGGAACTTGTATAAAATT
CAATACTTGGTCAGCTGGGATGAAGAAGGGGATAGAGTGTCACAGAAGCGCATAAATTGG
ATAAGAAAGCTTTATGCATACATGGCTCCATATGTTTCCAAGTTCCCCAGGGCTGCATAT
CTCAATTATAGGGATCTTGACTTGGGAATAAACAAGCTCAAAGGTAACACAAGCTATGCA
CAGGCCAGCATTTGGGGCATTAAGTACTTCAGCTGCAATTTCAATAGATTGGTTCATGTG
AAAACCAAAGTGGATCCAAGTAATTTCTTCAGGAATGAACAGAGCATCCCATCTCTTTCC
CCATGGTGGAAGAACTGA