Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01770.t01
CDS Infomation

cds chromosome:12X:12:2402139:2404091:1 gene:VIT_12s0028g01770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTAGTTCAAGCTCTGCAGAAACATATATACTTGTTTTTACCCTTCTATTCTCATCA
GTTTCATGGGCTGCTTCAAGTTCAGTCCATCAAAACTTTCTGCAATGTCTTACCCTTAAT
TCAAACTCCTCAACCCCTATCACAAAAGTCCTATACACCCCAAAAAACTCATCATATGAA
ACTGTATTGGATTTCTCCATACAGAACCTCAGATTCACATCCTCTTGCACCCCAAAACCA
CAGATTATAGTTACACCATTGCATGTATCCCACATCCAAGCAGCTGTTATTTGCTCCAAG
AAATATGGCTTGCAGATCAGAGCCCGGAGTGGTGGCCATGACTACGAGGGTCTCTCATAT
GTCTCTGAAGTCCCTTTCATCATCGTTGATTTGCTGGAACTTCGATCCATCAATGTTGAT
GTTGAAGATGGCAGTGCTTGGGTAGAGGCTGGTGCAACTCTGGGTGAAGTTTATTACAGC
ATTGCCAATAAAACTGCAATTCATGGCTTCCCTGCAGGCATCTGCCCCACTGTAGGAGTC
GGTGGGCACTTAAGTGGAGGGGGTTACGGGACATTGTTGAGAAAGTATGGCCTGGCAGCT
GACAATATAATCGATGCTTACATTGTTGATAGCAATGGTACACTTCTCAACAGAGAATCC
ATGGGAGAAGACTTGTTTTGGGCTATTAGAGGTGGTGGAGGAGCAAGCTTTGGAATCATC
GTCTCATGGAAAATCAAACTTGTGCCTGTCCCATCCACTGTGACCGTCTTCAGAGTTACC
CGCACCTTAGAACAAGATGCAGAGAAGATACTACTTAAATGGCAGCAAGTGGCTGATAAG
CTCCATGAAGACCTCTTCATCAGAGTCTACGTACAGGCTGTGAATGGCAGCCAAGAAGGG
GAGAGGACGATAAGCTCTACATACGAATCTCTATTTCTTGGTAACACCAGTGGACTGCTC
TCGCTAATGAACGAGAGCTTCCCTGAGCTGGGGTTAGCGGCCGACGACTGCAATGAAACA
AGTTGGATAGAGTCGGTGCTTTACTTTGCAGGCTTCTCTGGACAACCTCTTGATGTTTTG
CTCAACAGGAGTCAAACATCCAAGAACTATTTCAAGAATAAATCAGACTTTTTGAAGGAA
CCCATTCCCGAAACTGGGCTGCAAGGGATATGGAAGTTGTTCTACCAAGTAAAAAATGCA
ACGGCATTGATGATCATAAGCCCATATGGTGGAAGGATGAATGAGATTCCAGAAACTGAA
ACCCCTTTCCCACACAGGAAGGGAAGCTTATATTCAATCCAGTACGTAGTCGCCTGGCTG
GAGGAAGGAAAAAAGGTGTCAAAAAGGCATATAGATTGGGCAAGAAAGCTTCACAAGTAC
ATGGCTCCATATGTTTCCAAGTCTCCAAGAGCTGCATATCTCAACTATAGGGACCTTGAT
TTGGGAAGGAATAAGAACGGAAACACAAGCTATGCACAAGCCAGCATTTGGGGCCTCAAG
TACTACAAGATCAACTTCAATAGATTGGTTCAAGTCAAAACCAAGGTAGATCCAAGTAAC
TTCTTCAGGAATGAACAAAGCATCCCTCCTCTTTCATCATGGAAAATAATTTTTCCTTTT
TTAAAAAAATTATTCTTTGAATTGCTTCTCAAATGGTGTATGGTTTATTTTTTGCAGAAC
TTTGGAAAATCTATGCACTCTTTTCTAGAATAA

Peptide Sequence

PEP ID

VIT_12s0028g01770.t01
PEP Infomation

pep chromosome:12X:12:2402139:2404091:1 gene:VIT_12s0028g01770 transcript:VIT_12s0028g01770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSSSSAETYILVFTLLFSSVSWAASSSVHQNFLQCLTLNSNSSTPITKVLYTPKNSSYE
TVLDFSIQNLRFTSSCTPKPQIIVTPLHVSHIQAAVICSKKYGLQIRARSGGHDYEGLSY
VSEVPFIIVDLLELRSINVDVEDGSAWVEAGATLGEVYYSIANKTAIHGFPAGICPTVGV
GGHLSGGGYGTLLRKYGLAADNIIDAYIVDSNGTLLNRESMGEDLFWAIRGGGGASFGII
VSWKIKLVPVPSTVTVFRVTRTLEQDAEKILLKWQQVADKLHEDLFIRVYVQAVNGSQEG
ERTISSTYESLFLGNTSGLLSLMNESFPELGLAADDCNETSWIESVLYFAGFSGQPLDVL
LNRSQTSKNYFKNKSDFLKEPIPETGLQGIWKLFYQVKNATALMIISPYGGRMNEIPETE
TPFPHRKGSLYSIQYVVAWLEEGKKVSKRHIDWARKLHKYMAPYVSKSPRAAYLNYRDLD
LGRNKNGNTSYAQASIWGLKYYKINFNRLVQVKTKVDPSNFFRNEQSIPPLSSWKIIFPF
LKKLFFELLLKWCMVYFLQNFGKSMHSFLE

Transcript Sequence

Transcript ID

VIT_12s0028g01770.t01
Transcript Infomation

cdna chromosome:12X:12:2402139:2404091:1 gene:VIT_12s0028g01770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACCAAATGGGTAGTTCAAGCTCTGCAGAAACATATATACTTGTTTTTACCCTTCTATTC
TCATCAGTTTCATGGGCTGCTTCAAGTTCAGTCCATCAAAACTTTCTGCAATGTCTTACC
CTTAATTCAAACTCCTCAACCCCTATCACAAAAGTCCTATACACCCCAAAAAACTCATCA
TATGAAACTGTATTGGATTTCTCCATACAGAACCTCAGATTCACATCCTCTTGCACCCCA
AAACCACAGATTATAGTTACACCATTGCATGTATCCCACATCCAAGCAGCTGTTATTTGC
TCCAAGAAATATGGCTTGCAGATCAGAGCCCGGAGTGGTGGCCATGACTACGAGGGTCTC
TCATATGTCTCTGAAGTCCCTTTCATCATCGTTGATTTGCTGGAACTTCGATCCATCAAT
GTTGATGTTGAAGATGGCAGTGCTTGGGTAGAGGCTGGTGCAACTCTGGGTGAAGTTTAT
TACAGCATTGCCAATAAAACTGCAATTCATGGCTTCCCTGCAGGCATCTGCCCCACTGTA
GGAGTCGGTGGGCACTTAAGTGGAGGGGGTTACGGGACATTGTTGAGAAAGTATGGCCTG
GCAGCTGACAATATAATCGATGCTTACATTGTTGATAGCAATGGTACACTTCTCAACAGA
GAATCCATGGGAGAAGACTTGTTTTGGGCTATTAGAGGTGGTGGAGGAGCAAGCTTTGGA
ATCATCGTCTCATGGAAAATCAAACTTGTGCCTGTCCCATCCACTGTGACCGTCTTCAGA
GTTACCCGCACCTTAGAACAAGATGCAGAGAAGATACTACTTAAATGGCAGCAAGTGGCT
GATAAGCTCCATGAAGACCTCTTCATCAGAGTCTACGTACAGGCTGTGAATGGCAGCCAA
GAAGGGGAGAGGACGATAAGCTCTACATACGAATCTCTATTTCTTGGTAACACCAGTGGA
CTGCTCTCGCTAATGAACGAGAGCTTCCCTGAGCTGGGGTTAGCGGCCGACGACTGCAAT
GAAACAAGTTGGATAGAGTCGGTGCTTTACTTTGCAGGCTTCTCTGGACAACCTCTTGAT
GTTTTGCTCAACAGGAGTCAAACATCCAAGAACTATTTCAAGAATAAATCAGACTTTTTG
AAGGAACCCATTCCCGAAACTGGGCTGCAAGGGATATGGAAGTTGTTCTACCAAGTAAAA
AATGCAACGGCATTGATGATCATAAGCCCATATGGTGGAAGGATGAATGAGATTCCAGAA
ACTGAAACCCCTTTCCCACACAGGAAGGGAAGCTTATATTCAATCCAGTACGTAGTCGCC
TGGCTGGAGGAAGGAAAAAAGGTGTCAAAAAGGCATATAGATTGGGCAAGAAAGCTTCAC
AAGTACATGGCTCCATATGTTTCCAAGTCTCCAAGAGCTGCATATCTCAACTATAGGGAC
CTTGATTTGGGAAGGAATAAGAACGGAAACACAAGCTATGCACAAGCCAGCATTTGGGGC
CTCAAGTACTACAAGATCAACTTCAATAGATTGGTTCAAGTCAAAACCAAGGTAGATCCA
AGTAACTTCTTCAGGAATGAACAAAGCATCCCTCCTCTTTCATCATGGAAAATAATTTTT
CCTTTTTTAAAAAAATTATTCTTTGAATTGCTTCTCAAATGGTGTATGGTTTATTTTTTG
CAGAACTTTGGAAAATCTATGCACTCTTTTCTAGAATAA