Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01650.t01
CDS Infomation

cds chromosome:12X:12:2325209:2327737:1 gene:VIT_12s0028g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAGCATCTGTTGTCCTTTGGTCATCATCCTCATTCTGATCGGTAGTGTTGGTTTT
GCCCAAAGTGATGCAAGCAAGAATGAAAGCAGTCCTGTATTCTACCTTAATTCAAGTGTC
CCCTTAACATGGTACAACAACGACTCAATCAAGATCATGACTCCTGCGGATGGATCAAAA
GTGAGAGTGGTCCTCTTGAGACAGCAGTCCATTAGTTTTGTGTGTGGATTCTACTGTGTT
GAAGCCTGCAACTCCTACTTGTTCTCCATTGTTGCAGTTGGTGGTGGCAATTCAAGTGTG
GTCTGGTCAGCAAATAGGAACTATCCGGTAAAAGAAAACGCAACACTGCAATTGACCGTA
GATGGAGGGTTGGTGCTACAAGACTCGGATGGCACCCAGGTGTGGTCAACCAATGGGTCT
GGTAACTCCATTCTTGGAATGAATCTTACAGAAGCAGGGAACCTGGTTCTCCTAGGCAAC
AAAGGAGCCTTAGCTTGGCAGTCTTTCGATCACCCTTCCGATGTGTTGCTCGTCAGGCAG
TGCTTAAACGAGGGTCAAACACTGATTGCAAGCTCCTCCGGTGACATTTGGAACCAGGGA
CAATACTATGCCACCCTGACTTCAGATGCTGGCTTTGCTGTTTTTATTGATGCAGATCAG
GCTAAACTATTGATGTATTATAAGTTGGTGCCAGACAACAGGTCAAGCAACAGTACTGGA
TTAAATTATGCAGAGCTTCAACAACATGGATTCCTAGTGAACCTGGGAACATCCCAAGTA
ACATCTGGAAGGAATTCATATGAACATTCCGCTCAATCCGACGTCAAATATATGAGACTC
GATTTTGATGGGCATCTAAGAATATATCAGCACAGCGACACAACAGGATTGAGGGTGATT
GTTGATTTGATCACAGAAGATCTGGGTGACTGCCAGTATCCTCTCAGATGTGGGGAATAT
GGTGTATGTAAGGCTGATCAATATTGTAGCTGTCCTGAAGGTGAAGACGGGGTTCAATAT
TTCCAAACAGATCATGGTTGCTCTAGAATTACGCCTTTGTCATGTGAACCTTCACTGCAT
CATCTCCTGGAAGTGAAGAATGCTACCTACTTCAACACTATTGATTCAGATGCCGCATAT
CCAGGAATCAAGGATATGGACATGTGCAAGCAAGCCTGTCTGCAAAATTGTTCTTGTGGT
GGAGCATTTTTCAGGTATGAGAACAATGTTTCGGACGGGTATTGTTTTATGCCATCTAAA
ATCTTGTCCATAAGAGAAGGGCATATACCAAACTACAATTTCACATCGGCAACATTTATC
AAGGTACAGATTAACTTTGTGGCACCAAGTCTTGTGCCAGCAGCAAAAACTACAAGAGAG
AACTTCCCACCAACTCCGTCTTCAGGAGATGGAGCAAATATAGCAGCAATAGTAGTAGGA
GCTAGTATAGTCCCTCTCATCACATTTTGCCTTGTAGTAGTTACAATCCTGGCGACACTG
AGGAGGACTAGCACAGTGGAGGAAGGGGAAGACTATACTATCGATCAAGTTCCGGGAATG
CCTGTGAAGTTTCTGTATGAAGACCTTCGTGTGGCAACAGAGGATTTTAAGGAGAGAGTT
GGTAGTGGAGGCTTTGGGTCTGTGTTCAAAGGGTTGCTAGCAGATGGCACTAGGATTGCA
GTGAAGAGGTTGGACAGAATCGAGCAGGGGATGAGAGAGTTCTTGGCAGAAGTTAAGACT
ATAGGAAGTCTACACCATTTTAACCTTGTAAGACTGATTGGATTCTGTGCAGAAAAATCG
AACAGGCTTTTAGTTTTCGAATATATGTGCAATGGATCTTTGGATAACTGGATTTTCTAT
GGTTGCCAGAGACCTTGTCTAGATTGGGAAACCCGAAAGAGGATTATACTTGACATAGCC
AAAGGGTTGGCTTATCTTCATGAAGAATGCAGACATAGAATAGTTCATCTAGATATCAAG
CCGCAGAACATTCTCCTGGATGAAAACTTCAATGCTAAGGTCTCTGATTTTGGGCTGTCT
GAACTTATAGGCAGAGATGAAAGCCAAGTTTTCACCACAATGAGAGGAACTCCTGGGTAT
CTTGCTCCAGAGTGGAGCCAACCAAAAGTCACTGTGAAAGTTGACATCTATAGCTTTGGA
ATTGTTCTTCTTGAGATAGTCACTGGAAGGAGAAATGTGGATTGCACCCGGGAAGAATCT
AATTCACAAATGCTCAGGGTTCTGCAGAAGAAAGCCGAGGAAGAAAGACTAATTGAGATT
GTGGAAAATTTGGAGGAAATGAAAGATCATGGAGAAGTGGTGAGGATGATAAGGATTGGA
GCATGGTGTTTGCAGGATGATCCCACAAGAAGGCCTCCTATGTCTGTGGTTGTGAAGGTT
TTAGAGGGAGTGATGGAGGTGGACTCAAACATCATCTACAAGTTCATCCATGCAATGACT
TCAACTTCTCCATCTGATGATAAAGTTTGTACAGAACCAGAGGCATCTGTCCTATCCAAT
CCAAGATAA

Peptide Sequence

PEP ID

VIT_12s0028g01650.t01
PEP Infomation

pep chromosome:12X:12:2325209:2327737:1 gene:VIT_12s0028g01650 transcript:VIT_12s0028g01650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASICCPLVIILILIGSVGFAQSDASKNESSPVFYLNSSVPLTWYNNDSIKIMTPADGSK
VRVVLLRQQSISFVCGFYCVEACNSYLFSIVAVGGGNSSVVWSANRNYPVKENATLQLTV
DGGLVLQDSDGTQVWSTNGSGNSILGMNLTEAGNLVLLGNKGALAWQSFDHPSDVLLVRQ
CLNEGQTLIASSSGDIWNQGQYYATLTSDAGFAVFIDADQAKLLMYYKLVPDNRSSNSTG
LNYAELQQHGFLVNLGTSQVTSGRNSYEHSAQSDVKYMRLDFDGHLRIYQHSDTTGLRVI
VDLITEDLGDCQYPLRCGEYGVCKADQYCSCPEGEDGVQYFQTDHGCSRITPLSCEPSLH
HLLEVKNATYFNTIDSDAAYPGIKDMDMCKQACLQNCSCGGAFFRYENNVSDGYCFMPSK
ILSIREGHIPNYNFTSATFIKVQINFVAPSLVPAAKTTRENFPPTPSSGDGANIAAIVVG
ASIVPLITFCLVVVTILATLRRTSTVEEGEDYTIDQVPGMPVKFLYEDLRVATEDFKERV
GSGGFGSVFKGLLADGTRIAVKRLDRIEQGMREFLAEVKTIGSLHHFNLVRLIGFCAEKS
NRLLVFEYMCNGSLDNWIFYGCQRPCLDWETRKRIILDIAKGLAYLHEECRHRIVHLDIK
PQNILLDENFNAKVSDFGLSELIGRDESQVFTTMRGTPGYLAPEWSQPKVTVKVDIYSFG
IVLLEIVTGRRNVDCTREESNSQMLRVLQKKAEEERLIEIVENLEEMKDHGEVVRMIRIG
AWCLQDDPTRRPPMSVVVKVLEGVMEVDSNIIYKFIHAMTSTSPSDDKVCTEPEASVLSN
PR

Transcript Sequence

Transcript ID

VIT_12s0028g01650.t01
Transcript Infomation

cdna chromosome:12X:12:2325209:2327737:1 gene:VIT_12s0028g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAGCATCTGTTGTCCTTTGGTCATCATCCTCATTCTGATCGGTAGTGTTGGTTTT
GCCCAAAGTGATGCAAGCAAGAATGAAAGCAGTCCTGTATTCTACCTTAATTCAAGTGTC
CCCTTAACATGGTACAACAACGACTCAATCAAGATCATGACTCCTGCGGATGGATCAAAA
GTGAGAGTGGTCCTCTTGAGACAGCAGTCCATTAGTTTTGTGTGTGGATTCTACTGTGTT
GAAGCCTGCAACTCCTACTTGTTCTCCATTGTTGCAGTTGGTGGTGGCAATTCAAGTGTG
GTCTGGTCAGCAAATAGGAACTATCCGGTAAAAGAAAACGCAACACTGCAATTGACCGTA
GATGGAGGGTTGGTGCTACAAGACTCGGATGGCACCCAGGTGTGGTCAACCAATGGGTCT
GGTAACTCCATTCTTGGAATGAATCTTACAGAAGCAGGGAACCTGGTTCTCCTAGGCAAC
AAAGGAGCCTTAGCTTGGCAGTCTTTCGATCACCCTTCCGATGTGTTGCTCGTCAGGCAG
TGCTTAAACGAGGGTCAAACACTGATTGCAAGCTCCTCCGGTGACATTTGGAACCAGGGA
CAATACTATGCCACCCTGACTTCAGATGCTGGCTTTGCTGTTTTTATTGATGCAGATCAG
GCTAAACTATTGATGTATTATAAGTTGGTGCCAGACAACAGGTCAAGCAACAGTACTGGA
TTAAATTATGCAGAGCTTCAACAACATGGATTCCTAGTGAACCTGGGAACATCCCAAGTA
ACATCTGGAAGGAATTCATATGAACATTCCGCTCAATCCGACGTCAAATATATGAGACTC
GATTTTGATGGGCATCTAAGAATATATCAGCACAGCGACACAACAGGATTGAGGGTGATT
GTTGATTTGATCACAGAAGATCTGGGTGACTGCCAGTATCCTCTCAGATGTGGGGAATAT
GGTGTATGTAAGGCTGATCAATATTGTAGCTGTCCTGAAGGTGAAGACGGGGTTCAATAT
TTCCAAACAGATCATGGTTGCTCTAGAATTACGCCTTTGTCATGTGAACCTTCACTGCAT
CATCTCCTGGAAGTGAAGAATGCTACCTACTTCAACACTATTGATTCAGATGCCGCATAT
CCAGGAATCAAGGATATGGACATGTGCAAGCAAGCCTGTCTGCAAAATTGTTCTTGTGGT
GGAGCATTTTTCAGGTATGAGAACAATGTTTCGGACGGGTATTGTTTTATGCCATCTAAA
ATCTTGTCCATAAGAGAAGGGCATATACCAAACTACAATTTCACATCGGCAACATTTATC
AAGGTACAGATTAACTTTGTGGCACCAAGTCTTGTGCCAGCAGCAAAAACTACAAGAGAG
AACTTCCCACCAACTCCGTCTTCAGGAGATGGAGCAAATATAGCAGCAATAGTAGTAGGA
GCTAGTATAGTCCCTCTCATCACATTTTGCCTTGTAGTAGTTACAATCCTGGCGACACTG
AGGAGGACTAGCACAGTGGAGGAAGGGGAAGACTATACTATCGATCAAGTTCCGGGAATG
CCTGTGAAGTTTCTGTATGAAGACCTTCGTGTGGCAACAGAGGATTTTAAGGAGAGAGTT
GGTAGTGGAGGCTTTGGGTCTGTGTTCAAAGGGTTGCTAGCAGATGGCACTAGGATTGCA
GTGAAGAGGTTGGACAGAATCGAGCAGGGGATGAGAGAGTTCTTGGCAGAAGTTAAGACT
ATAGGAAGTCTACACCATTTTAACCTTGTAAGACTGATTGGATTCTGTGCAGAAAAATCG
AACAGGCTTTTAGTTTTCGAATATATGTGCAATGGATCTTTGGATAACTGGATTTTCTAT
GGTTGCCAGAGACCTTGTCTAGATTGGGAAACCCGAAAGAGGATTATACTTGACATAGCC
AAAGGGTTGGCTTATCTTCATGAAGAATGCAGACATAGAATAGTTCATCTAGATATCAAG
CCGCAGAACATTCTCCTGGATGAAAACTTCAATGCTAAGGTCTCTGATTTTGGGCTGTCT
GAACTTATAGGCAGAGATGAAAGCCAAGTTTTCACCACAATGAGAGGAACTCCTGGGTAT
CTTGCTCCAGAGTGGAGCCAACCAAAAGTCACTGTGAAAGTTGACATCTATAGCTTTGGA
ATTGTTCTTCTTGAGATAGTCACTGGAAGGAGAAATGTGGATTGCACCCGGGAAGAATCT
AATTCACAAATGCTCAGGGTTCTGCAGAAGAAAGCCGAGGAAGAAAGACTAATTGAGATT
GTGGAAAATTTGGAGGAAATGAAAGATCATGGAGAAGTGGTGAGGATGATAAGGATTGGA
GCATGGTGTTTGCAGGATGATCCCACAAGAAGGCCTCCTATGTCTGTGGTTGTGAAGGTT
TTAGAGGGAGTGATGGAGGTGGACTCAAACATCATCTACAAGTTCATCCATGCAATGACT
TCAACTTCTCCATCTGATGATAAAGTTTGTACAGAACCAGAGGCATCTGTCCTATCCAAT
CCAAGATAA