Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01370.t01
CDS Infomation

cds chromosome:12X:12:2027750:2033018:-1 gene:VIT_12s0028g01370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCTTTTGCCACCATCGTTGCAGTGTTGTTGGCAGTCCCTTTTCTGTGTCAAGTA
GATGGGAGGATTTCAAATAAGGAGGGTTGTGATTTGTTTGAAGGGAGTTGGGTGAATGAT
ACTTCATATCCTCTGTATGATACAAACGAGTGTCCATTCATAGAGAAGGAGTTTGATTGC
CAGAAAAATGGAAGACCAGACAAATTCTATCTCCATTACAGATGGCAGCCTTCTGCTTGC
AAACTACCAAGATTTAGTGGTCAAGATTTCTTGGAGAAATTAAGAGGGAAAAGCATCATG
TTTGTGGGAGATTCATTGAGTTTGAATCAATGGCAGTCACTCACGTGTATGCTTCATGTA
GCAGTAGCACAGGCAAACTATTCCTCCGTAAGGATAGGAGGGCTCTCCACTTTCACATTC
CCGACATATAATGCTAAAGTGATGTTTTCTCGCAACGCTTTTCTTGTTGACATCGTAAGT
ACACCAAATGGGGCAGTTTTAAAACTTGATTCTATTGAAAGTGGCAAAATTTGGAAAGAC
ATTGATGTTTTGGTCTTCAACACATGGCATTGGTGGCTTCACACAGGAAGGAAACAGCCA
TGGAGTTTAATTCAAGATGGAAATGTCATAGTCAAAGACATGGATCGCTTGGTTGCTTAT
GAAAAAGCGTTGAAGACATGGGCAAATTGGGTGGACTCTCAAGTAGATCCTACAAAAACT
AAAGTTTTTTTCCAAGGTGTTTCGCCTGATCATATGAATGGAAGCACTTGGGGAGAATCA
AATCCTAGTAGTAATTGTAAAGGGCAAATGCAACCGATATTTGGTACAACATTTCCGGGA
GGCCAACATCCAGCAGAAGCAGTAGTAGAAAAAGTGTTACAAACAATGACAAAGCCAGTG
TATTTGCTAAGAGTTACTACCTTGTCACAACTCAGAAAAGATGGTCATCCTTCTGTTTAT
GGCCATGGAGGGCATAGAGACATGGATTGTAGCCATTGGTGTCTTGCTGGAGTTCCCGAT
ACTTGGAATGAACTTCTATATGCAGCTCTTATTCAAAATTAA

Peptide Sequence

PEP ID

VIT_12s0028g01370.t01
PEP Infomation

pep chromosome:12X:12:2027750:2033018:-1 gene:VIT_12s0028g01370 transcript:VIT_12s0028g01370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSFATIVAVLLAVPFLCQVDGRISNKEGCDLFEGSWVNDTSYPLYDTNECPFIEKEFDC
QKNGRPDKFYLHYRWQPSACKLPRFSGQDFLEKLRGKSIMFVGDSLSLNQWQSLTCMLHV
AVAQANYSSVRIGGLSTFTFPTYNAKVMFSRNAFLVDIVSTPNGAVLKLDSIESGKIWKD
IDVLVFNTWHWWLHTGRKQPWSLIQDGNVIVKDMDRLVAYEKALKTWANWVDSQVDPTKT
KVFFQGVSPDHMNGSTWGESNPSSNCKGQMQPIFGTTFPGGQHPAEAVVEKVLQTMTKPV
YLLRVTTLSQLRKDGHPSVYGHGGHRDMDCSHWCLAGVPDTWNELLYAALIQN

Transcript Sequence

Transcript ID

VIT_12s0028g01370.t01
Transcript Infomation

cdna chromosome:12X:12:2027750:2033018:-1 gene:VIT_12s0028g01370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCTCTCTCTCTTTTTCTTGTTCTTCTCCGATGGGTTCTTTTGCCACCATCGTTGCAGT
GTTGTTGGCAGTCCCTTTTCTGTGTCAAGTAGATGGGAGGATTTCAAATAAGGAGGGTTG
TGATTTGTTTGAAGGGAGTTGGGTGAATGATACTTCATATCCTCTGTATGATACAAACGA
GTGTCCATTCATAGAGAAGGAGTTTGATTGCCAGAAAAATGGAAGACCAGACAAATTCTA
TCTCCATTACAGATGGCAGCCTTCTGCTTGCAAACTACCAAGATTTAGTGGTCAAGATTT
CTTGGAGAAATTAAGAGGGAAAAGCATCATGTTTGTGGGAGATTCATTGAGTTTGAATCA
ATGGCAGTCACTCACGTGTATGCTTCATGTAGCAGTAGCACAGGCAAACTATTCCTCCGT
AAGGATAGGAGGGCTCTCCACTTTCACATTCCCGACATATAATGCTAAAGTGATGTTTTC
TCGCAACGCTTTTCTTGTTGACATCGTAAGTACACCAAATGGGGCAGTTTTAAAACTTGA
TTCTATTGAAAGTGGCAAAATTTGGAAAGACATTGATGTTTTGGTCTTCAACACATGGCA
TTGGTGGCTTCACACAGGAAGGAAACAGCCATGGAGTTTAATTCAAGATGGAAATGTCAT
AGTCAAAGACATGGATCGCTTGGTTGCTTATGAAAAAGCGTTGAAGACATGGGCAAATTG
GGTGGACTCTCAAGTAGATCCTACAAAAACTAAAGTTTTTTTCCAAGGTGTTTCGCCTGA
TCATATGAATGGAAGCACTTGGGGAGAATCAAATCCTAGTAGTAATTGTAAAGGGCAAAT
GCAACCGATATTTGGTACAACATTTCCGGGAGGCCAACATCCAGCAGAAGCAGTAGTAGA
AAAAGTGTTACAAACAATGACAAAGCCAGTGTATTTGCTAAGAGTTACTACCTTGTCACA
ACTCAGAAAAGATGGTCATCCTTCTGTTTATGGCCATGGAGGGCATAGAGACATGGATTG
TAGCCATTGGTGTCTTGCTGGAGTTCCCGATACTTGGAATGAACTTCTATATGCAGCTCT
TATTCAAAATTAATCTCTTGTTTTTATTATATTATTTGTAATTGAAAATTCAATTATAGG
GTTTTAACTTGTTTATATATTTTGTTGTCAAGTTTGTTACCAATTTATGGATATCTAAGT
GGTTTT