Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01360.t01
CDS Infomation

cds chromosome:12X:12:2013688:2022216:-1 gene:VIT_12s0028g01360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGCAACGGCCATTGGTTTTGCACTACTGACGCTTCTGTGTCTGGGCCAAGCTCAT
GGAGATCACCACTCTCCCAATGGGGTTGGTGGGGCTGTGAAGGAGAAGAAGAAGTGTGAT
TATTCTCAAGGGAGATGGGTTTACAGTTCTTGGTATCCTCTCTACAAATCATCAGACTGT
CCCTTTCTTGAATCAGAGTTTGATTGCCAGAAGAATGGTAGGCCAGACAAACTCTATCTC
AAGCTCAGATGGCAGCCCACTTCATGCAATTTACCAAGCTTCAATGGAATTGATTTTTTG
AGAAGGAATAGAGGGAAGAGGATCATGTTTGTGGGGGACTCACTGAGCTTGAATCAGTGG
CAGTCACTCACATGCATGCTTCACACAGCTGTGCCGAAGGCTGCCTACTCATTGAGAACG
TGGCAAGGCCTCTCCACATTCAAATTCCCAGCATACAATGTTTCGCTAATGCTGTGGCGT
GATGCACTTCTGGTGGATCTAGTAAAAAAGAATGGCACACGAGTTCTAAAACTCGACTCT
ATCAACAGCGTAAAACCATGGAAAGGGATGGACATTCTGATATTCAACTCATGGCATTGG
TGGCTTCACAGCGGAAGACAACAACCATGGGATGTTATTCAATACAGGAGAAATACATAC
AAAGACATGAATCGCTTGATTGCTTATAAGCTAGCAATGACAACATGGGGTAGATGGATA
GACTCCAATATAGATTCTTCCAAAACCCAGGTTTTCTTCCAAGGCATTTCCCCAGATCAC
AGTAGTGGAAGTGATTGGAATGAGCCAAAGGCGAGCTGCAGAGGACAAACAAGAGCAGTG
CAAGGCACAAAGTACCCAGGAGGATCAAATCCAGCACAAGTTGTTGTAGAGCAAGTTCTG
TCCCAAATGTCGAAACCAGTTTATTTGCTGAACGTGACAAGTCTTTCACAGCTAAGAAAA
GATGGGCATCCTTCAATCTACGGGTATGGAGGCAAGCGTGGGAATGACTGCAGCCATTGG
TGTCTTCCTGGAGTTCCTGATACTTGGAATCAACTCCTATACGCATCCCTCATCCTCAAA
ATTTGA

Peptide Sequence

PEP ID

VIT_12s0028g01360.t01
PEP Infomation

pep chromosome:12X:12:2013688:2022216:-1 gene:VIT_12s0028g01360 transcript:VIT_12s0028g01360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGATAIGFALLTLLCLGQAHGDHHSPNGVGGAVKEKKKCDYSQGRWVYSSWYPLYKSSDC
PFLESEFDCQKNGRPDKLYLKLRWQPTSCNLPSFNGIDFLRRNRGKRIMFVGDSLSLNQW
QSLTCMLHTAVPKAAYSLRTWQGLSTFKFPAYNVSLMLWRDALLVDLVKKNGTRVLKLDS
INSVKPWKGMDILIFNSWHWWLHSGRQQPWDVIQYRRNTYKDMNRLIAYKLAMTTWGRWI
DSNIDSSKTQVFFQGISPDHSSGSDWNEPKASCRGQTRAVQGTKYPGGSNPAQVVVEQVL
SQMSKPVYLLNVTSLSQLRKDGHPSIYGYGGKRGNDCSHWCLPGVPDTWNQLLYASLILK
I

Transcript Sequence

Transcript ID

VIT_12s0028g01360.t01
Transcript Infomation

cdna chromosome:12X:12:2013688:2022216:-1 gene:VIT_12s0028g01360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATTATATATACAACGATACTCTCCTTAATCTCTCTCTCTCATATTCTCTTATTCAAAT
ATTACATCTCTCCACTTCTTTTCTCTATCATGGGTGCAACGGCCATTGGTTTTGCACTAC
TGACGCTTCTGTGTCTGGGCCAAGCTCATGGAGATCACCACTCTCCCAATGGGGTTGGTG
GGGCTGTGAAGGAGAAGAAGAAGTGTGATTATTCTCAAGGGAGATGGGTTTACAGTTCTT
GGTATCCTCTCTACAAATCATCAGACTGTCCCTTTCTTGAATCAGAGTTTGATTGCCAGA
AGAATGGTAGGCCAGACAAACTCTATCTCAAGCTCAGATGGCAGCCCACTTCATGCAATT
TACCAAGCTTCAATGGAATTGATTTTTTGAGAAGGAATAGAGGGAAGAGGATCATGTTTG
TGGGGGACTCACTGAGCTTGAATCAGTGGCAGTCACTCACATGCATGCTTCACACAGCTG
TGCCGAAGGCTGCCTACTCATTGAGAACGTGGCAAGGCCTCTCCACATTCAAATTCCCAG
CATACAATGTTTCGCTAATGCTGTGGCGTGATGCACTTCTGGTGGATCTAGTAAAAAAGA
ATGGCACACGAGTTCTAAAACTCGACTCTATCAACAGCGTAAAACCATGGAAAGGGATGG
ACATTCTGATATTCAACTCATGGCATTGGTGGCTTCACAGCGGAAGACAACAACCATGGG
ATGTTATTCAATACAGGAGAAATACATACAAAGACATGAATCGCTTGATTGCTTATAAGC
TAGCAATGACAACATGGGGTAGATGGATAGACTCCAATATAGATTCTTCCAAAACCCAGG
TTTTCTTCCAAGGCATTTCCCCAGATCACAGTAGTGGAAGTGATTGGAATGAGCCAAAGG
CGAGCTGCAGAGGACAAACAAGAGCAGTGCAAGGCACAAAGTACCCAGGAGGATCAAATC
CAGCACAAGTTGTTGTAGAGCAAGTTCTGTCCCAAATGTCGAAACCAGTTTATTTGCTGA
ACGTGACAAGTCTTTCACAGCTAAGAAAAGATGGGCATCCTTCAATCTACGGGTATGGAG
GCAAGCGTGGGAATGACTGCAGCCATTGGTGTCTTCCTGGAGTTCCTGATACTTGGAATC
AACTCCTATACGCATCCCTCATCCTCAAAATTTGATGTGTTAGTTGAGGAATAGAGTTGG
ATGAGTATCCTTTTAGGTGGCTTGTTGAGGGTGTTTTATAACGTGCCACCGAGGTTATAT
TGTTATAATGAAACAATACTAATAGAGATAAGTATATAGGATTTTATACCTTTGGTAGCT
TCATATATAGATACCTATA