Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01250.t01
CDS Infomation

cds chromosome:12X:12:1886665:1894952:-1 gene:VIT_12s0028g01250 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6H561]
Sequence

ATGGGCCTGCTCTCAGTTTCTTCTCCACTTCCCTCCCTAGGGTTTCCCAATCTCCGCACC
ACCTCTTTCCCCAAGCCCTCTTCCTTCTCCCTGCGCCCCCTTATCTCCGCCTCACTCTCC
TCCTCTCCATCTCTCAAGGCCCTCAATACCAAAACCCTAGATTCAGTTTTAGCCCTTCCA
CTAGCCCATGGCTCTCAGACGCCGGGCATGGGCGCCAGAGGGGCGGAGGCGGACGCTATG
GGCCTGCTTCTGAAGGAGAGGATCGTCTTCCTTGGGAACAACGTGGACGACTTTGTGGCC
GATGCCATAATCAGTCAGTTGCTGTTGTTGGACGCTCAGGACCCCACCAAGGACATCAGG
CTCTTCATCAACTCCCCTGGTGGCTCCCTCAGTGCTACAATGGCTATTTATGACATTGTA
CAGCTGGTTAGGGCAGATGTTTCCACAGTTGCACTTGGCATTTCTGCATCAACAGCTTCC
ATAATCCTGGGTGGTGGTACCAAAGGCAAGCGTTTTGCAATGCCCAACACACGGATAATG
ATTCATCAACCTCTTGGAGGTGCTAGTGGCCAAGCAATAGATGTGGAAATTCAAGCCCAG
GAAATTATGCATAATAAAAGTAATGTCACAAAAATTATCGCAGGTTTTAGTGGTCGCTCA
TTTGAACAAGTCGAGAAAGATATTGATAGGGATCGTTACATGTCTCCAATTGAAGCAGTT
GAATATGGAATAATTGATGCTGTTATAGATAGAGATAGCATTATTCCACTTGTGCCTGTG
CCAGAAAAGGTGAAGTCAAGACTGAATTATGAGGAAATCAGTAAGGATCCAAGGAAATTC
TTGACACCAGATATCCCTGATGATGAGATATACTAG

Peptide Sequence

PEP ID

VIT_12s0028g01250.t01
PEP Infomation

pep chromosome:12X:12:1886665:1894952:-1 gene:VIT_12s0028g01250 transcript:VIT_12s0028g01250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6H561]
Sequence

MGLLSVSSPLPSLGFPNLRTTSFPKPSSFSLRPLISASLSSSPSLKALNTKTLDSVLALP
LAHGSQTPGMGARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKDIR
LFINSPGGSLSATMAIYDIVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIM
IHQPLGGASGQAIDVEIQAQEIMHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIEAV
EYGIIDAVIDRDSIIPLVPVPEKVKSRLNYEEISKDPRKFLTPDIPDDEIY

Transcript Sequence

Transcript ID

VIT_12s0028g01250.t01
Transcript Infomation

cdna chromosome:12X:12:1886665:1894952:-1 gene:VIT_12s0028g01250 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6H561]
Sequence

GGAGAGCTACTCAAGAGAAACCTCACTCTCACTGATTTTTTTTCAATGGGCCTGCTCTCA
GTTTCTTCTCCACTTCCCTCCCTAGGGTTTCCCAATCTCCGCACCACCTCTTTCCCCAAG
CCCTCTTCCTTCTCCCTGCGCCCCCTTATCTCCGCCTCACTCTCCTCCTCTCCATCTCTC
AAGGCCCTCAATACCAAAACCCTAGATTCAGTTTTAGCCCTTCCACTAGCCCATGGCTCT
CAGACGCCGGGCATGGGCGCCAGAGGGGCGGAGGCGGACGCTATGGGCCTGCTTCTGAAG
GAGAGGATCGTCTTCCTTGGGAACAACGTGGACGACTTTGTGGCCGATGCCATAATCAGT
CAGTTGCTGTTGTTGGACGCTCAGGACCCCACCAAGGACATCAGGCTCTTCATCAACTCC
CCTGGTGGCTCCCTCAGTGCTACAATGGCTATTTATGACATTGTACAGCTGGTTAGGGCA
GATGTTTCCACAGTTGCACTTGGCATTTCTGCATCAACAGCTTCCATAATCCTGGGTGGT
GGTACCAAAGGCAAGCGTTTTGCAATGCCCAACACACGGATAATGATTCATCAACCTCTT
GGAGGTGCTAGTGGCCAAGCAATAGATGTGGAAATTCAAGCCCAGGAAATTATGCATAAT
AAAAGTAATGTCACAAAAATTATCGCAGGTTTTAGTGGTCGCTCATTTGAACAAGTCGAG
AAAGATATTGATAGGGATCGTTACATGTCTCCAATTGAAGCAGTTGAATATGGAATAATT
GATGCTGTTATAGATAGAGATAGCATTATTCCACTTGTGCCTGTGCCAGAAAAGGTGAAG
TCAAGACTGAATTATGAGGAAATCAGTAAGGATCCAAGGAAATTCTTGACACCAGATATC
CCTGATGATGAGATATACTAGTTGATATATTTGATACAGGTTTTCAGGATGTGATTGCCT
CTTCTTAGTAATGGAGCTGTCCACAGCAGAACTGAAAATACCAATGTTATGTTTTAGGTG
CTTCAGGATCCCATTTTACTTCCATTTAAAAAGGATTTTGATTTTCAACACTCTCTTTCA
TGTGAACCAGTGTGCACACTATACTTTTGGTCTGGTTACGGCCGAAACAGATTGCATTTA
CTCTTTTAAGGCAGTATGTCTTGGTCATGCAGAGAGAGCTAGGCAGTGGTCAGGATATGC
AGCAGCATTTCATCCAAAATTGATAATTGTGACCTTGCTTTTGTCAGCGGCATTGGCATT
TGTAATAGGTTTTCAGTAGTTTGTTTCAGGAATATTATTACACAAGTGCGTTTTGCTTTG
CTGCTATCTGGGAAGTCAGAATTGTTCTACCTTCCTGCCATA