Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01200.t01
CDS Infomation

cds chromosome:12X:12:1792331:1822291:-1 gene:VIT_12s0028g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGTTTCAGGTGTTGAACTGCAACCTGAGGTGGACGCCACCTCGGATGCTCCCGAA
CACTGTCAGGAAAGCAATCAAAAGGAAAAAGGAGAAGGAACCTCCTTAGTTCAGCAGTCT
AGACGGCCAAACCTATCGTCTTTGCAGATACCTGTAAGGTCTCTTGAAAATACATCCTCT
GCTTTTGCAAGGATAGAAATTTCCTCAGCCCCGAGTCCTACTTCCACTAAAGCAGGATTG
CCGCCTAGACCACCTTCAGCTAAATTCAAATCATCCATGAGAAATCTGCTTCCCCAAAGA
AGCTTGAGGGCAAAAAATTTGTCTGAGGATGGGGAAAAGACAGTTCTTATCATCCCAGAC
ACACCATCATCGGATGGTCCTTTGGATAAGCCTACTACTTCAAGGTCATTTTCTCTCAAC
AAGGTTCTTTTCCCTTCAGTAAAAGCAACATATTCTTTACCAGCTACACCAATTGCAAGT
TCAGGTTCTGAGTCCCTGCAGGAAAAGAATCTGGATGGTGAATCTGATTTTTCTAAGGTA
GAAGTTCAGCATCATATGACACGCTCATTGTCAGTTCCTGTAAATGTTAAAGCCAGAAGT
TTAAGGCGGATGGACTCTACAGGAGGTTTGATCCGTGTGATATCAGCAACCCCTCGTCCA
GTGGCAGTTGATGGTGCCTCACAAGATGATGCCCCAGTAACAGAAATTGTGAGTGGAGAT
GATGGGGAAGATATTCCCGAGGAAGAAGCAGTTTGCAGGATTTGTTTCATTGAGCTTGGG
GAAGGAGGTGATACTCTTAAGTTGGAGTGTAGCTGTAAAGGTGAACTTGCACTTGCTCAC
CAAGACTGTGCTGTAAAGTGGTTTAGCATTAAAGGAAACAAGACATGCGATGTCTGCAAG
CAGGATGTCCAGAACCTTCCAGTAACATTACTGAAAATACAAAATCCTCAGACTGTTGTT
AGACGGCCAGCAACTCTACCACAGCAGAGAGAAGAGACTCGATACAGGGTCTGGCAGGAT
GTTCCAGTTCTAGTCATGGTCAGCATGCTTGCATATTTCTGCTTCTTAGAGCAATTACTG
GTAACTAACCTGGGTCCTCGTGCTCTTGCCATTTCTTTGCCCTTCTCATGTGTTTTAGGT
CTTCTTTCGTCCATGATAGCTTCCACCATGGTGAGCAAGAGTTACATATGGGCTTATGCT
TCATTCCAGTTTGCAATTGTGATCCTATTTGCTCATATCTTCTATACTATTCTCAACGTA
AACCCAATTCTTTCAGTTCTCCTTTCCTCATTCACTGGGTTTGGAATTGCAATAAGCACA
AATTCGCTTCTAGTAGAGTACCTGAGATGGAGAGCAAGCAGGCAGGTGCGATCTTCCGAT
CAAAATAACAGAGGTGTGCAACAACCACAACGGCACCATCACCACCACCACCACCACCAC
CAGTGGCAGCAGCAGCAGCAACAACAACAACAACAACATCAACACCAATTACAAGACCTA
ATACAAGAATCCAATACTGGGCCTACAGAGAGTTCCAGGCAAGAAGAAAACAGGATTCAG
AACACTTGA

Peptide Sequence

PEP ID

VIT_12s0028g01200.t01
PEP Infomation

pep chromosome:12X:12:1792331:1822291:-1 gene:VIT_12s0028g01200 transcript:VIT_12s0028g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVSGVELQPEVDATSDAPEHCQESNQKEKGEGTSLVQQSRRPNLSSLQIPVRSLENTSS
AFARIEISSAPSPTSTKAGLPPRPPSAKFKSSMRNLLPQRSLRAKNLSEDGEKTVLIIPD
TPSSDGPLDKPTTSRSFSLNKVLFPSVKATYSLPATPIASSGSESLQEKNLDGESDFSKV
EVQHHMTRSLSVPVNVKARSLRRMDSTGGLIRVISATPRPVAVDGASQDDAPVTEIVSGD
DGEDIPEEEAVCRICFIELGEGGDTLKLECSCKGELALAHQDCAVKWFSIKGNKTCDVCK
QDVQNLPVTLLKIQNPQTVVRRPATLPQQREETRYRVWQDVPVLVMVSMLAYFCFLEQLL
VTNLGPRALAISLPFSCVLGLLSSMIASTMVSKSYIWAYASFQFAIVILFAHIFYTILNV
NPILSVLLSSFTGFGIAISTNSLLVEYLRWRASRQVRSSDQNNRGVQQPQRHHHHHHHHH
QWQQQQQQQQQQHQHQLQDLIQESNTGPTESSRQEENRIQNT

Transcript Sequence

Transcript ID

VIT_12s0028g01200.t01
Transcript Infomation

cdna chromosome:12X:12:1792331:1822291:-1 gene:VIT_12s0028g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTACTTTATTCCCTCGTCTCTCGAGTCTTGAGTCTCTTGATCCATTTGATCTCAGTTTAA
TTTAACCTTTTTGGCTTTTTGGGTTTTTGCACAGCTCACTAGTCACTCCTCGCACCTCAC
TCAGGCTTTTGAAACCTAGGGTTTAATTTCTTTGGTTATCCGAGTTCAATGGAAGTTTCA
GGTGTTGAACTGCAACCTGAGGTGGACGCCACCTCGGATGCTCCCGAACACTGTCAGGAA
AGCAATCAAAAGGAAAAAGGAGAAGGAACCTCCTTAGTTCAGCAGTCTAGACGGCCAAAC
CTATCGTCTTTGCAGATACCTGTAAGGTCTCTTGAAAATACATCCTCTGCTTTTGCAAGG
ATAGAAATTTCCTCAGCCCCGAGTCCTACTTCCACTAAAGCAGGATTGCCGCCTAGACCA
CCTTCAGCTAAATTCAAATCATCCATGAGAAATCTGCTTCCCCAAAGAAGCTTGAGGGCA
AAAAATTTGTCTGAGGATGGGGAAAAGACAGTTCTTATCATCCCAGACACACCATCATCG
GATGGTCCTTTGGATAAGCCTACTACTTCAAGGTCATTTTCTCTCAACAAGGTTCTTTTC
CCTTCAGTAAAAGCAACATATTCTTTACCAGCTACACCAATTGCAAGTTCAGGTTCTGAG
TCCCTGCAGGAAAAGAATCTGGATGGTGAATCTGATTTTTCTAAGGTAGAAGTTCAGCAT
CATATGACACGCTCATTGTCAGTTCCTGTAAATGTTAAAGCCAGAAGTTTAAGGCGGATG
GACTCTACAGGAGGTTTGATCCGTGTGATATCAGCAACCCCTCGTCCAGTGGCAGTTGAT
GGTGCCTCACAAGATGATGCCCCAGTAACAGAAATTGTGAGTGGAGATGATGGGGAAGAT
ATTCCCGAGGAAGAAGCAGTTTGCAGGATTTGTTTCATTGAGCTTGGGGAAGGAGGTGAT
ACTCTTAAGTTGGAGTGTAGCTGTAAAGGTGAACTTGCACTTGCTCACCAAGACTGTGCT
GTAAAGTGGTTTAGCATTAAAGGAAACAAGACATGCGATGTCTGCAAGCAGGATGTCCAG
AACCTTCCAGTAACATTACTGAAAATACAAAATCCTCAGACTGTTGTTAGACGGCCAGCA
ACTCTACCACAGCAGAGAGAAGAGACTCGATACAGGGTCTGGCAGGATGTTCCAGTTCTA
GTCATGGTCAGCATGCTTGCATATTTCTGCTTCTTAGAGCAATTACTGGTAACTAACCTG
GGTCCTCGTGCTCTTGCCATTTCTTTGCCCTTCTCATGTGTTTTAGGTCTTCTTTCGTCC
ATGATAGCTTCCACCATGGTGAGCAAGAGTTACATATGGGCTTATGCTTCATTCCAGTTT
GCAATTGTGATCCTATTTGCTCATATCTTCTATACTATTCTCAACGTAAACCCAATTCTT
TCAGTTCTCCTTTCCTCATTCACTGGGTTTGGAATTGCAATAAGCACAAATTCGCTTCTA
GTAGAGTACCTGAGATGGAGAGCAAGCAGGCAGGTGCGATCTTCCGATCAAAATAACAGA
GGTGTGCAACAACCACAACGGCACCATCACCACCACCACCACCACCACCAGTGGCAGCAG
CAGCAGCAACAACAACAACAACAACATCAACACCAATTACAAGACCTAATACAAGAATCC
AATACTGGGCCTACAGAGAGTTCCAGGCAAGAAGAAAACAGGATTCAGAACACTTGATTG
ACAAGGATAAGAGGAAATTTTTGTAACCATTACAGATGAAAATGTTAATTAATTCTTCAG
CATACACACCTTCAACAAGTAGTTGAACCGAAGGAAACCAAGGGATTGAATAGAAACAAG
AGGTCACTGAGTATGCAACAGTTCCCAAGTGTGAATATATATGTAGCAGAAATCGTAGAT
TCTGGAAACAAGTTCTTGAGCTGGGTTTCTGATGTTTTCATATCAGTTATCAAGAATGAT
GCAGAAGAAATTTCAGATTTTGGAACAACCAATCTTGTTGAGTTTGTGTTGTGAGTGGGT
TTTCCTTTTTATGCTCTCATATCAAAAGACTGTTGCCTTAACATTTTCTAAAGGGCCACT
GCTTCATGGCATAATGTGGATGCTATTTCCCGGTTTCAAGTGCTTTCCAGCTTCAAAATT
ATTAGCATGA