Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01190.t01
CDS Infomation

cds chromosome:12X:12:1779104:1792022:1 gene:VIT_12s0028g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAGGTACAGAAATGGTGAAATATGGGATTTTGAGGACGAAATGCCTGTCTCCCCA
GATGGGTCTGAGGTTGTTTTGGGCTTGGATGGTGGCACCACTTCAACCGTCTGTGTCTGT
ATGCCCTTCTTCCCCCTTTCCGACCGTCCACTCCCTGACCCTGTCCCCGTTCTTGCCCGT
GCTGTGGCTGGCTGTTCTAATCACAACAGTGTCGGAGAAACTGCCGCAAGAGAGACACTG
GAACAAGTTATGGCAGATGCACTCTCAAAATCAGGTTCAAATCGATCAGCTGTTCGAGCT
GTTTGTCTAGCTGTATCTGGCGTTAATCATCCAACAGATCAACAGAGAATATTAAGCTGG
CTCAGGGATATATTCTCCAGTCATGTAAAATTGTATGTTCAGAATGATGCTGTGGCAGCT
CTAGCTAGTGGAACGATGGGAGAGCTTCATGGATGTGTTCTAATTGCTGGTACAGGGACT
ATTGCATATGGATTCACGGAAGATGGCAGGGAAGCTCGGGCCGCTGGTGCTGGACCTATC
TTAGGTGATTGGGGCAGTGGTTATGGAATAGCTGCCCAGGCATTAACTGCAGTGGTAAGG
GCTCATGATGGTCGTGGTCCACAAACTGCGCTTACATATAGCATTCTAAGGGCACTTAGT
CTTTCATCTCCAGATGAACTCATTGGGTGGACCTATGCTGATCCATCTTGGGCACGCATT
GCGGCACTTGTCCCAGTGGTGGTATCTTGTGCAGATGCAGGTGATGAAGTTGCAAACAAG
ATCTTGCTAGAGTCAGTCGAAGAGTTGGCCTCCAGTGTGAAAGCTGTTGTCCAAAGACTT
GGCTTGTGTGGAGAAGATGGAAAGGGTTCTTTCCCTCTTGTCATGGTTGGTGGTGTTCTT
GAAGCAAATAAGACGTGGGATATAGGCAAAGAAGTTGTAAACTGTATCTACAAGGATTAT
CCTGGGACACTCCCTATTAGGCCAAAGGTGGAACCAGCAGTTGGGGCAGCACTATTGGCT
TGGAATTTCTTCATGAAAGAAGCTCACAAGTAA

Peptide Sequence

PEP ID

VIT_12s0028g01190.t01
PEP Infomation

pep chromosome:12X:12:1779104:1792022:1 gene:VIT_12s0028g01190 transcript:VIT_12s0028g01190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKRYRNGEIWDFEDEMPVSPDGSEVVLGLDGGTTSTVCVCMPFFPLSDRPLPDPVPVLAR
AVAGCSNHNSVGETAARETLEQVMADALSKSGSNRSAVRAVCLAVSGVNHPTDQQRILSW
LRDIFSSHVKLYVQNDAVAALASGTMGELHGCVLIAGTGTIAYGFTEDGREARAAGAGPI
LGDWGSGYGIAAQALTAVVRAHDGRGPQTALTYSILRALSLSSPDELIGWTYADPSWARI
AALVPVVVSCADAGDEVANKILLESVEELASSVKAVVQRLGLCGEDGKGSFPLVMVGGVL
EANKTWDIGKEVVNCIYKDYPGTLPIRPKVEPAVGAALLAWNFFMKEAHK

Transcript Sequence

Transcript ID

VIT_12s0028g01190.t01
Transcript Infomation

cdna chromosome:12X:12:1779104:1792022:1 gene:VIT_12s0028g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCTCTCTTCCATCTTCTTCACCATTGCTCTACTTTCTCAGTGATGAAGAGGTACAGAA
ATGGTGAAATATGGGATTTTGAGGACGAAATGCCTGTCTCCCCAGATGGGTCTGAGGTTG
TTTTGGGCTTGGATGGTGGCACCACTTCAACCGTCTGTGTCTGTATGCCCTTCTTCCCCC
TTTCCGACCGTCCACTCCCTGACCCTGTCCCCGTTCTTGCCCGTGCTGTGGCTGGCTGTT
CTAATCACAACAGTGTCGGAGAAACTGCCGCAAGAGAGACACTGGAACAAGTTATGGCAG
ATGCACTCTCAAAATCAGGTTCAAATCGATCAGCTGTTCGAGCTGTTTGTCTAGCTGTAT
CTGGCGTTAATCATCCAACAGATCAACAGAGAATATTAAGCTGGCTCAGGGATATATTCT
CCAGTCATGTAAAATTGTATGTTCAGAATGATGCTGTGGCAGCTCTAGCTAGTGGAACGA
TGGGAGAGCTTCATGGATGTGTTCTAATTGCTGGTACAGGGACTATTGCATATGGATTCA
CGGAAGATGGCAGGGAAGCTCGGGCCGCTGGTGCTGGACCTATCTTAGGTGATTGGGGCA
GTGGTTATGGAATAGCTGCCCAGGCATTAACTGCAGTGGTAAGGGCTCATGATGGTCGTG
GTCCACAAACTGCGCTTACATATAGCATTCTAAGGGCACTTAGTCTTTCATCTCCAGATG
AACTCATTGGGTGGACCTATGCTGATCCATCTTGGGCACGCATTGCGGCACTTGTCCCAG
TGGTGGTATCTTGTGCAGATGCAGGTGATGAAGTTGCAAACAAGATCTTGCTAGAGTCAG
TCGAAGAGTTGGCCTCCAGTGTGAAAGCTGTTGTCCAAAGACTTGGCTTGTGTGGAGAAG
ATGGAAAGGGTTCTTTCCCTCTTGTCATGGTTGGTGGTGTTCTTGAAGCAAATAAGACGT
GGGATATAGGCAAAGAAGTTGTAAACTGTATCTACAAGGATTATCCTGGGACACTCCCTA
TTAGGCCAAAGGTGGAACCAGCAGTTGGGGCAGCACTATTGGCTTGGAATTTCTTCATGA
AAGAAGCTCACAAGTAAGCCTGGAGAAGCTGACCATTGATGACTTCACAAGGGTTCATCA
ATTGTATAGCAAAATACAAGTGACAGCTGAAAAACAAGAAAGGGCAGTAAGGAAACAAGC
ACTACAAAACCAAAAATAAGCTTTATTGTTCGGTATGAGGGCTTTACTTTAGTCTAGCGT
TGGTAGGCTGATTTTTATCTTTGCATTTTTTTTCCTTTCAATTATTCTTGTTCTCATTTC
AGAATTGTATTAGATTCTTGTGGGGGGGC