Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01140.t01
CDS Infomation

cds chromosome:12X:12:1701069:1713637:1 gene:VIT_12s0028g01140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATTGGGTACACGCCCCTCCGAAACGACACCATTTTCGCCAGGGCCCTCGACCTC
CGAGACTCCACCATAAACCCAGTTCCATTCCGCTCAGTTTTCGCCAAACCCAAAAGCACC
GTGGTCAGAACATTGGAGGTGGTGTCCATGTTGGCGCCAAGAAAGTTTATGCAGAGGAGG
AAGAAAATTGAAGTGTTCAGAGACGCAGCTGATGAAGCTGAGCAGAGGAAGTGGAGGAGA
ATGATGAAGGAAATTGAGGAGGTGGGTTCTGCTGTTTCAGTGCTCAGTACGAAGAACCAG
GCTCTCCCCAGAGACCTCGTTCTGGGTACTTTGGTTAGATTCAAGCAGCTCAAGAAATGG
AGCCTTGTCAGTGAGATTCTTGAGTGGCTACAGACTCAGCCCTGGTGGGATTTCAGTGAA
ATGGATTTCTTGATGCTTGTTACAGCTTATGGAAAACAAGGGGACTTTAACAAGGCTGAG
AGGGTGTTTGGTGACATGCATAAGAAGGGCTATTCACCGAGTGTGATATCCCACACTGCT
CTTATGGAAGCATATGGAAAAGGAAAGCAATATAATAAGGCTGAATCAGTATTTCGAAGG
ATGCTGTCTTCGGGCCCTGAGCCTTCTGCTTTGACTTATCAACTAATACTTAAAATATTT
GTTGAGGGTAACAAGTTTAAGGAAGCTGAAGAAACTTTTGAGACCCTTTTGGATGACGAG
AAATCACCTTTGAAACCGGACCAGAAAATGTTCCACATGATGATTTATATGTATAGAAAG
GCTGGGAACTATGAAAAAGCTCGTAAAATATTTGGCCTGATGCGTGAGCGAGGAGTTCCT
CAATCCACAGTTACTTACAATAGCCTAATGTCTTTTGAAACTAATTACAAGGAAGTTTCA
AAAACGTATGATCAGATGCAAAGAGCTGGTCTTCGGCCAGATGTTGTGAGCTATGCCTTA
CTCATTAACGCTTATGGGAAAGCTCGAAGGGAAGAAGAGGCGTTAGCTGTTTTTGAGGAG
ATGCTGGATGCAGGTGTCAGGCCAACACACAAAGCTTATAACATTTTGCTTGATGCATTT
GCAATTTCTGGAATGGTAGACCAAGCTCGGACCGTGTTCAAGAGCATGAGAAGAGACAGA
TGTACTCCAGATATCTGCTCTTATACAACTATGTTATCAGCTTATGTAAATGCATCTGAC
ATGGAGGGTGCTGAGAAATTCTTTAGAAGATTGAAACAGGACGGCTTTGAGCCCAATGTT
GTTACTTATGGGACATTGATCAAAGGGTATGCAAAAATAAGTAATCTTGAGAAGATGATG
GAGAAATATGAAGAAATGCAGGTACATGGCATCAAAGCCAATCAGGCAATCTATACTGCA
ATGATGGATGCATATGGCAAGAACAAGGATTTTGGCAGTGCTGTATTTTGGTTCAAGGAA
ATGGGATTTTGTGGGGTTCCTCCTGACCGAAAAGCAACAAATATCCTTTTGTCTTTGGCA
AAAACAGAGGCAGAAAAGGAAGAAGCTAATCTACTTGTAGGATATAGCAGTAAATATAGT
AATGGACAAATGGATAATGGATCATTTAAGTGTGCTGATGAGGATGATGATGAAGACAAC
AGTAATGATGATGATGAGGTAGAATGA

Peptide Sequence

PEP ID

VIT_12s0028g01140.t01
PEP Infomation

pep chromosome:12X:12:1701069:1713637:1 gene:VIT_12s0028g01140 transcript:VIT_12s0028g01140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMIGYTPLRNDTIFARALDLRDSTINPVPFRSVFAKPKSTVVRTLEVVSMLAPRKFMQRR
KKIEVFRDAADEAEQRKWRRMMKEIEEVGSAVSVLSTKNQALPRDLVLGTLVRFKQLKKW
SLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTA
LMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDE
KSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETNYKEVS
KTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF
AISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNV
VTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKE
MGFCGVPPDRKATNILLSLAKTEAEKEEANLLVGYSSKYSNGQMDNGSFKCADEDDDEDN
SNDDDEVE

Transcript Sequence

Transcript ID

VIT_12s0028g01140.t01
Transcript Infomation

cdna chromosome:12X:12:1701069:1713637:1 gene:VIT_12s0028g01140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTGAAACCAGGGAGAGAAGATGATGATTGGGTACACGCCCCTCCGAAACGACACCATTT
TCGCCAGGGCCCTCGACCTCCGAGACTCCACCATAAACCCAGTTCCATTCCGCTCAGTTT
TCGCCAAACCCAAAAGCACCGTGGTCAGAACATTGGAGGTGGTGTCCATGTTGGCGCCAA
GAAAGTTTATGCAGAGGAGGAAGAAAATTGAAGTGTTCAGAGACGCAGCTGATGAAGCTG
AGCAGAGGAAGTGGAGGAGAATGATGAAGGAAATTGAGGAGGTGGGTTCTGCTGTTTCAG
TGCTCAGTACGAAGAACCAGGCTCTCCCCAGAGACCTCGTTCTGGGTACTTTGGTTAGAT
TCAAGCAGCTCAAGAAATGGAGCCTTGTCAGTGAGATTCTTGAGTGGCTACAGACTCAGC
CCTGGTGGGATTTCAGTGAAATGGATTTCTTGATGCTTGTTACAGCTTATGGAAAACAAG
GGGACTTTAACAAGGCTGAGAGGGTGTTTGGTGACATGCATAAGAAGGGCTATTCACCGA
GTGTGATATCCCACACTGCTCTTATGGAAGCATATGGAAAAGGAAAGCAATATAATAAGG
CTGAATCAGTATTTCGAAGGATGCTGTCTTCGGGCCCTGAGCCTTCTGCTTTGACTTATC
AACTAATACTTAAAATATTTGTTGAGGGTAACAAGTTTAAGGAAGCTGAAGAAACTTTTG
AGACCCTTTTGGATGACGAGAAATCACCTTTGAAACCGGACCAGAAAATGTTCCACATGA
TGATTTATATGTATAGAAAGGCTGGGAACTATGAAAAAGCTCGTAAAATATTTGGCCTGA
TGCGTGAGCGAGGAGTTCCTCAATCCACAGTTACTTACAATAGCCTAATGTCTTTTGAAA
CTAATTACAAGGAAGTTTCAAAAACGTATGATCAGATGCAAAGAGCTGGTCTTCGGCCAG
ATGTTGTGAGCTATGCCTTACTCATTAACGCTTATGGGAAAGCTCGAAGGGAAGAAGAGG
CGTTAGCTGTTTTTGAGGAGATGCTGGATGCAGGTGTCAGGCCAACACACAAAGCTTATA
ACATTTTGCTTGATGCATTTGCAATTTCTGGAATGGTAGACCAAGCTCGGACCGTGTTCA
AGAGCATGAGAAGAGACAGATGTACTCCAGATATCTGCTCTTATACAACTATGTTATCAG
CTTATGTAAATGCATCTGACATGGAGGGTGCTGAGAAATTCTTTAGAAGATTGAAACAGG
ACGGCTTTGAGCCCAATGTTGTTACTTATGGGACATTGATCAAAGGGTATGCAAAAATAA
GTAATCTTGAGAAGATGATGGAGAAATATGAAGAAATGCAGGTACATGGCATCAAAGCCA
ATCAGGCAATCTATACTGCAATGATGGATGCATATGGCAAGAACAAGGATTTTGGCAGTG
CTGTATTTTGGTTCAAGGAAATGGGATTTTGTGGGGTTCCTCCTGACCGAAAAGCAACAA
ATATCCTTTTGTCTTTGGCAAAAACAGAGGCAGAAAAGGAAGAAGCTAATCTACTTGTAG
GATATAGCAGTAAATATAGTAATGGACAAATGGATAATGGATCATTTAAGTGTGCTGATG
AGGATGATGATGAAGACAACAGTAATGATGATGATGAGGTAGAATGATGCAGAACATATC
CAATCCTTTGGAGGGGAAACAAGATGTTTTGATTGTTTGAAATGGTTATGATGAACAAAA
CAAAGGCTGTACACACTCAAAAATTTTGATAATCTGTGAATTTTGAGTTTTGTTTTTGTT
TCTT