Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01120.t01
CDS Infomation

cds chromosome:12X:12:1682201:1691707:1 gene:VIT_12s0028g01120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCGTCCGAGAGAAGTAATCGCCAGTTACGCAGAGCTCTTTGTTATGCAAATATT
GAAAGGCAGCAAGCGACATCACCATCTGTTATCGTCATAGGTGCTGGTATGGCAGGCATT
GCAGCTGCTCGTGCCCTTCATGATGCCTCATTTCGGGTTGTTCTGTTGGAATCGCGTGAT
AGAATTGGTGGACGGGTTCATACTGATTACTCATTTGGTTTTCCTGTTGACCTGGGAGCA
TCATGGCTTCATGGGGTCTGCAAAGAGAATCCCTTGGCACCTTTGATCAGCAGACTGGGG
CTACCACTCTACCGTACTAGTGGCGACAACTCTGTGCTGTATGACCATGATTTAGAAAGC
TATGCCCTCTTTGATATGGATGGGAATCAAGTTCCTCAAGAATTAGTCCGAGAGATTGGT
GTAGCATTTGAGAAAATTTTGGAAGAGACTGATAAAGTGCGACAGGAACATAGTGAAGAC
ATGCCCATCCTAGATGCATTCAAAATTGTTTTTGAAAGGAGGCCAGATTTAAGGCTGGAG
GGGCTGGCTCATAAGGTACTGCAATGGTACTTGTGCAGAATGGAAGGCTGGTTTGCTGCA
GATGCTGATAACATATCACTTAAAAGTTGGGATCAGGAAGAACTCCTTCCTGGTGGTCAT
GGGCTAATGGTCCGAGGTTACATCCCTGTTATAAACACCCTCGCAAAAGGTCTCGACATC
CACTTGAACCACAGGGTTACAAAAATAGTAAGGCGTTATAATGGAGTCAAGGTAACAGTA
GAAGATGGGAGATCATTTGTTGCAGATGCTGCCATTGTTGCTGTCCCCATTGGTGTTCTG
AAATCGAGTCGCATAAAGTTTGAGCCAAGGCTCCCAGAGTGGAAGGAAGAAGCAATTGCT
GACATTGGAGTGGGAATCGAAAACAAGATAGCCTTGCACTTTGATAAGGTGTTTTGGCCA
AATGTGGAGTTCTTGGGAGTAGTTGCAGATACGTCTTATGGCTGCAGTTACTTTCTAAAT
CTCCATAAAGCTACAAGTCATTCTGTTCTTGTTTATATGCCTGCTGGGCAGCTGGCCAAA
GACATTGAGAAAATGTCTGATGAAGCTGCTGCTAATTTTGCTTTTATGCAACTCAAGAAG
ATCCTTCCTGAAGCTTCTGACCCGATTCAGTATCTTGTTTCTCGGTGGGGCACAGATGAG
AATTCACTTGGATCCTACACCTATGATGCAGTAGGGAAACCCCATGATCTGTATGAGAGG
CTAAGGGTCCCTGTAGACAATCTATTTTTTGCAGGGGAGGCGACCAGTGTGAACTACCCG
GGGTCTGTGCATGGTGCATTCTCAACTGGAACATTAGCTGCAGAGGAATGCAGGATGCGT
GTCCTAGAGCGATATGGGGAGCTCGATTTGTTCCAGCCAGCCATGGGTGAAGAAACATCA
TTCTCTATCCCGCTTCAGATTTCCCGGATGTGA

Peptide Sequence

PEP ID

VIT_12s0028g01120.t01
PEP Infomation

pep chromosome:12X:12:1682201:1691707:1 gene:VIT_12s0028g01120 transcript:VIT_12s0028g01120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESSERSNRQLRRALCYANIERQQATSPSVIVIGAGMAGIAAARALHDASFRVVLLESRD
RIGGRVHTDYSFGFPVDLGASWLHGVCKENPLAPLISRLGLPLYRTSGDNSVLYDHDLES
YALFDMDGNQVPQELVREIGVAFEKILEETDKVRQEHSEDMPILDAFKIVFERRPDLRLE
GLAHKVLQWYLCRMEGWFAADADNISLKSWDQEELLPGGHGLMVRGYIPVINTLAKGLDI
HLNHRVTKIVRRYNGVKVTVEDGRSFVADAAIVAVPIGVLKSSRIKFEPRLPEWKEEAIA
DIGVGIENKIALHFDKVFWPNVEFLGVVADTSYGCSYFLNLHKATSHSVLVYMPAGQLAK
DIEKMSDEAAANFAFMQLKKILPEASDPIQYLVSRWGTDENSLGSYTYDAVGKPHDLYER
LRVPVDNLFFAGEATSVNYPGSVHGAFSTGTLAAEECRMRVLERYGELDLFQPAMGEETS
FSIPLQISRM

Transcript Sequence

Transcript ID

VIT_12s0028g01120.t01
Transcript Infomation

cdna chromosome:12X:12:1682201:1691707:1 gene:VIT_12s0028g01120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGAAAGCTTCCCCTTTCCCTGTCCCTCTTTCTCTCTCCAGTCTGTCTTTTAATTCCGTT
ACTGATTTGCTTCCGATCCCCGAAATTCAGCTGAGTTATGGGAGGAATAGTTCCATTTGT
GTGAGTTTCGCCGAATCGCGGCGTTTTCCGGCTAGATTTCCGGCGAGATCGAGAGAGGTG
TGAGCAGTGGTGTTAATAGACCACACCGCATGAGCTGGTTGGTTAACTTAGGGTTTACTT
CGAATTCCAATCATTTCACCACCTGTCTCTTGATTTTCATTCTTCATTACTCTCCTCAAT
TACCCCCTGCCTTGTTCAAATTCGAGAAGCCTCTCGAACCTGGATCATTAGTTAGTTGTT
TTAATTGGAATTTCAATCATCGCCGCCGTCGCCGTTTTAGATCGCCAGAGAATGGAGTCG
TCCGAGAGAAGTAATCGCCAGTTACGCAGAGCTCTTTGTTATGCAAATATTGAAAGGCAG
CAAGCGACATCACCATCTGTTATCGTCATAGGTGCTGGTATGGCAGGCATTGCAGCTGCT
CGTGCCCTTCATGATGCCTCATTTCGGGTTGTTCTGTTGGAATCGCGTGATAGAATTGGT
GGACGGGTTCATACTGATTACTCATTTGGTTTTCCTGTTGACCTGGGAGCATCATGGCTT
CATGGGGTCTGCAAAGAGAATCCCTTGGCACCTTTGATCAGCAGACTGGGGCTACCACTC
TACCGTACTAGTGGCGACAACTCTGTGCTGTATGACCATGATTTAGAAAGCTATGCCCTC
TTTGATATGGATGGGAATCAAGTTCCTCAAGAATTAGTCCGAGAGATTGGTGTAGCATTT
GAGAAAATTTTGGAAGAGACTGATAAAGTGCGACAGGAACATAGTGAAGACATGCCCATC
CTAGATGCATTCAAAATTGTTTTTGAAAGGAGGCCAGATTTAAGGCTGGAGGGGCTGGCT
CATAAGGTACTGCAATGGTACTTGTGCAGAATGGAAGGCTGGTTTGCTGCAGATGCTGAT
AACATATCACTTAAAAGTTGGGATCAGGAAGAACTCCTTCCTGGTGGTCATGGGCTAATG
GTCCGAGGTTACATCCCTGTTATAAACACCCTCGCAAAAGGTCTCGACATCCACTTGAAC
CACAGGGTTACAAAAATAGTAAGGCGTTATAATGGAGTCAAGGTAACAGTAGAAGATGGG
AGATCATTTGTTGCAGATGCTGCCATTGTTGCTGTCCCCATTGGTGTTCTGAAATCGAGT
CGCATAAAGTTTGAGCCAAGGCTCCCAGAGTGGAAGGAAGAAGCAATTGCTGACATTGGA
GTGGGAATCGAAAACAAGATAGCCTTGCACTTTGATAAGGTGTTTTGGCCAAATGTGGAG
TTCTTGGGAGTAGTTGCAGATACGTCTTATGGCTGCAGTTACTTTCTAAATCTCCATAAA
GCTACAAGTCATTCTGTTCTTGTTTATATGCCTGCTGGGCAGCTGGCCAAAGACATTGAG
AAAATGTCTGATGAAGCTGCTGCTAATTTTGCTTTTATGCAACTCAAGAAGATCCTTCCT
GAAGCTTCTGACCCGATTCAGTATCTTGTTTCTCGGTGGGGCACAGATGAGAATTCACTT
GGATCCTACACCTATGATGCAGTAGGGAAACCCCATGATCTGTATGAGAGGCTAAGGGTC
CCTGTAGACAATCTATTTTTTGCAGGGGAGGCGACCAGTGTGAACTACCCGGGGTCTGTG
CATGGTGCATTCTCAACTGGAACATTAGCTGCAGAGGAATGCAGGATGCGTGTCCTAGAG
CGATATGGGGAGCTCGATTTGTTCCAGCCAGCCATGGGTGAAGAAACATCATTCTCTATC
CCGCTTCAGATTTCCCGGATGTGACTTGGTGGCCTCTAGGCTGTCGTCCCCCACTACAAC
GAAGTACTGTGTGTTTGCGTTTATATTATTAATAAGGGGCCTCCTGACTAACGCATTGTT
GCCATTTTGATTGGCTGCTTTGGGAAAATTAGTGTTCTCCCACAGATTAATCAATCAAAG
GATTGGTTAATGTGTATAGTCTCCTTCCACCCAAATACTTTGTCTGTGAACTATCGAGTA
TGAACTTTGTATATCTATATTCTAGTCTAGTGTAATCTAGTCTCTGGTCTAGTCCATAAT
GGAGCCTGGTATTTCATTAGAGGCAGAAGTTGACGGTATCAGAAAGTATGGATAGCTTTT
TAGATGCATCAACGAGAGATATATGTAGGGAAGACGCTAGAGATTTTCTTGTTCAATAAT
GGTTTGTATCGCACTCTCCTCTATAGCTATATATAGAAAACATTGTGGTGTTATATAAAT
AAGTAAGATAAGGGTGTGGCATTTAGTACCTCTCTGGATGTTGAACTCTCTGGGCAAAGG
TTGTAGCCCCTCCAAAGAACACAATGGAGAGGTGATCATAATGGTCTTCATGAGTTTGAC
TGAAAACAAGTATGTCATCTA