Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01100.t01
CDS Infomation

cds chromosome:12X:12:1637785:1643792:1 gene:VIT_12s0028g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCTGTATGTGAGCAGTGCATGTTTTTGTGGGTTCAGTCAGAAAAGGGTAGAGAGG
ATCAAAGCTGTTGCTTCTGAGGGGTTTGCTACCGTAAAGACAGAGGAAGAGAAGGTGAAG
TTGGGGGGTTCTGATTTGAAAGTGACAAAGCTTGGAATCGGAGCATGGTCATGGGGTGAT
ACATCGTATTGGAATAACTTCGAATGGGATGATAGGAAGATGAAGGCAGCTAAGGGTGCT
TTTGATGCTAGCATAGATGTTGGTATAACCTTGTTTGATACTGCTGAAGTTTATGGCTCA
AGGTTCTCTTTTGGCGCTATAAATTCTGAAACTCTACTAGGAAGGTTCATTAAAGAAAGA
AAAGAAAAGAATCCAGAAGTGGAGGTTGCTGTTGCAACCAAGTTTGCAGCTTTACCATGG
AGGTTTGGACGTCAGAGTGTAATCACTGCCCTTAAGGATTCCCTATGTCGCCTTGGACTT
TTGTCAGTGGATCTCTATCAACTTCATTGGCCAGGAGTATGGGGAAATGAAGGGTATATT
GATGGTCTTGGAGATGCAGTGGAGATGGGCCTTGTGAAGGCTGTAGGAGTTTCTAACTAC
AGTGAAAAGCGTCTCCTTGAGGCTTATGAGAAGCTTAAGAAGAGAGGTATCCCACTGGCT
TCAAACCAAGTCAATTACAGCCTTTTATACAGGCTTCCAGAGGAGAATGGGGTGAAGGCT
GCCTGTGATGAACTTGGGGTTACTTTGATTGCATATTCACCTATTGCTCAAGGTGCTCTC
ACGGGGAAATATACGCCAGGCAATCCTCCCACTGGACCTCGAGGTCGGATTTATACCCCC
GAGTTCCTAGCAAAGCTCCAACCTCTGCTAAACAGAATCATGGAGATAGGACAGAATTAC
GATAAAACTCCCACACAGGTAGTCCTCAACTGGTTAATATGCCAGGAGAATGTTGTGCCC
ATTCCAGGAGCCAAAAATGCAGAGCAGGCTAAGGAGTTTTCAGGTGCACTTGGGTGGAGA
CTCACCGATGATGAGATCAACGAGCTGCGCTCTTTGGCATCAGAGACAAAGCCTGTTATC
GGTTTTCCTGTTGAGAACTTGTAG

Peptide Sequence

PEP ID

VIT_12s0028g01100.t01
PEP Infomation

pep chromosome:12X:12:1637785:1643792:1 gene:VIT_12s0028g01100 transcript:VIT_12s0028g01100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALYVSSACFCGFSQKRVERIKAVASEGFATVKTEEEKVKLGGSDLKVTKLGIGAWSWGD
TSYWNNFEWDDRKMKAAKGAFDASIDVGITLFDTAEVYGSRFSFGAINSETLLGRFIKER
KEKNPEVEVAVATKFAALPWRFGRQSVITALKDSLCRLGLLSVDLYQLHWPGVWGNEGYI
DGLGDAVEMGLVKAVGVSNYSEKRLLEAYEKLKKRGIPLASNQVNYSLLYRLPEENGVKA
ACDELGVTLIAYSPIAQGALTGKYTPGNPPTGPRGRIYTPEFLAKLQPLLNRIMEIGQNY
DKTPTQVVLNWLICQENVVPIPGAKNAEQAKEFSGALGWRLTDDEINELRSLASETKPVI
GFPVENL

Transcript Sequence

Transcript ID

VIT_12s0028g01100.t01
Transcript Infomation

cdna chromosome:12X:12:1637785:1643792:1 gene:VIT_12s0028g01100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGATGGGATTTGGGGTTGTCAGACAAGAATCTAGGAGCCGGACGTGGACAATGTAAAGA
CCATGTCTCCAGAATTTCGTATGGCCACCAAAATCTTTCAGCGGTGAGACCTGAGATTCA
CACGTTCAAATTAACATCTGGGCTCTATTTTTTTTCTCAGAGACTGGCCTTCCCAGTTTT
GGAATTCGTCTTCCTTGATTCTGCCACAAAATTCTAAGAAAGAATTTTCTCCTTTCATCA
GGACAGCAACCCATCTTTTCGGTTCGGAAACCCCAAGTTTCCTGGAAAATTGCTAGTTCC
ATTGATGGCGCTGTATGTGAGCAGTGCATGTTTTTGTGGGTTCAGTCAGAAAAGGGTAGA
GAGGATCAAAGCTGTTGCTTCTGAGGGGTTTGCTACCGTAAAGACAGAGGAAGAGAAGGT
GAAGTTGGGGGGTTCTGATTTGAAAGTGACAAAGCTTGGAATCGGAGCATGGTCATGGGG
TGATACATCGTATTGGAATAACTTCGAATGGGATGATAGGAAGATGAAGGCAGCTAAGGG
TGCTTTTGATGCTAGCATAGATGTTGGTATAACCTTGTTTGATACTGCTGAAGTTTATGG
CTCAAGGTTCTCTTTTGGCGCTATAAATTCTGAAACTCTACTAGGAAGGTTCATTAAAGA
AAGAAAAGAAAAGAATCCAGAAGTGGAGGTTGCTGTTGCAACCAAGTTTGCAGCTTTACC
ATGGAGGTTTGGACGTCAGAGTGTAATCACTGCCCTTAAGGATTCCCTATGTCGCCTTGG
ACTTTTGTCAGTGGATCTCTATCAACTTCATTGGCCAGGAGTATGGGGAAATGAAGGGTA
TATTGATGGTCTTGGAGATGCAGTGGAGATGGGCCTTGTGAAGGCTGTAGGAGTTTCTAA
CTACAGTGAAAAGCGTCTCCTTGAGGCTTATGAGAAGCTTAAGAAGAGAGGTATCCCACT
GGCTTCAAACCAAGTCAATTACAGCCTTTTATACAGGCTTCCAGAGGAGAATGGGGTGAA
GGCTGCCTGTGATGAACTTGGGGTTACTTTGATTGCATATTCACCTATTGCTCAAGGTGC
TCTCACGGGGAAATATACGCCAGGCAATCCTCCCACTGGACCTCGAGGTCGGATTTATAC
CCCCGAGTTCCTAGCAAAGCTCCAACCTCTGCTAAACAGAATCATGGAGATAGGACAGAA
TTACGATAAAACTCCCACACAGGTAGTCCTCAACTGGTTAATATGCCAGGAGAATGTTGT
GCCCATTCCAGGAGCCAAAAATGCAGAGCAGGCTAAGGAGTTTTCAGGTGCACTTGGGTG
GAGACTCACCGATGATGAGATCAACGAGCTGCGCTCTTTGGCATCAGAGACAAAGCCTGT
TATCGGTTTTCCTGTTGAGAACTTGTAGAATTTTTACTCAAAGCTTTTTCAGTGTGGGCA
TACAGTTCTCCATGTCAATGAAAATGAATAAAGGTATATACAACCACACTTTCAGACTCT
TCTCTGTATGATTTATTACTTAACTTAATCCCTGTTTTACATTACG