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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g01090.t01
CDS Infomation

cds chromosome:12X:12:1612912:1619165:1 gene:VIT_12s0028g01090 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:E0CU01]
Sequence

ATGCCTGAGGGAATAACAGCAGAGAAGCTTTTGAACAATATAATGGAAACAATTAGTGAC
AATGCTCAAAAGAAGAAATCTGTGTCATTCTTTGAGGAAGAGAAATCAAACTCAGTCACT
TCTCAGTTCAAACGGCTCTTTGGACGGGAGAAGCCAGTTTACAATCTTCTGGGGGCTGGA
AAATCTGCTGACTTGATGTTATGGAGGAACAAGAAAATCTCCGCGAGCTTCATAACTGGT
GCTACACTTATCTGGGTGCTCTTTGAATGGCTTAACTACCATTTTCTAACTCTTCTATGC
TTCGCTGTGGTTCTTGGTATGATTGCACAGTTTGTTTGGTCAAATGCATCGGGCGTATTC
AGCAGGTCGTCATCTGAAGTCCCTCGTATCGTTTTGCCTGACGAGTTATTTCAAAATATT
GGTGTCGCAGTTGGTGTTCAGATTAACCAAGCCTTGGGTTTTCTTCAAGATGTTGCTTGT
GGAGGAAATCTGAAGCAATTTCTTTTGGTTGTAGTAAGCTTGTGGGCAGCTGCTGTGATA
GGGAGCTGGTGCAACTTTCTGACTGTTCTGTATGTTGGTTTCATTGCTGCCCACACACTG
CCAGTTCTGTATGAGAGATATGAAGATCAAGTTGATGGGTTTGTATACCAGGTCCTGGGA
CAGCTTCAGCACAACTACCGGAAGCTGGATTCTGGTTTCCTCAGCAAAATACCCAAGGGA
AGCCTCAAGGGAAAGAAGCATGAATAG

Peptide Sequence

PEP ID

VIT_12s0028g01090.t01
PEP Infomation

pep chromosome:12X:12:1612912:1619165:1 gene:VIT_12s0028g01090 transcript:VIT_12s0028g01090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:E0CU01]
Sequence

MPEGITAEKLLNNIMETISDNAQKKKSVSFFEEEKSNSVTSQFKRLFGREKPVYNLLGAG
KSADLMLWRNKKISASFITGATLIWVLFEWLNYHFLTLLCFAVVLGMIAQFVWSNASGVF
SRSSSEVPRIVLPDELFQNIGVAVGVQINQALGFLQDVACGGNLKQFLLVVVSLWAAAVI
GSWCNFLTVLYVGFIAAHTLPVLYERYEDQVDGFVYQVLGQLQHNYRKLDSGFLSKIPKG
SLKGKKHE

Transcript Sequence

Transcript ID

VIT_12s0028g01090.t01
Transcript Infomation

cdna chromosome:12X:12:1612912:1619165:1 gene:VIT_12s0028g01090 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:E0CU01]
Sequence

GCCGGTATGCATCCACCGTTCTTGAGTTGAGTCTGCGTACGCAATTTTGGGCTGTTCAGA
GTGTTCCCTCGTTGTGTCCGATGGTCATTTGTTGAACGATCAAAACCCATCTCTCTTTTC
CTCTCTCAGTCTTCTCTTCCTGTTCTTCTCTTAATTCTCGTCAACGGTCGCTGTAGTGAT
AATTAAAGCATAGGAAAAATGCCTGAGGGAATAACAGCAGAGAAGCTTTTGAACAATATA
ATGGAAACAATTAGTGACAATGCTCAAAAGAAGAAATCTGTGTCATTCTTTGAGGAAGAG
AAATCAAACTCAGTCACTTCTCAGTTCAAACGGCTCTTTGGACGGGAGAAGCCAGTTTAC
AATCTTCTGGGGGCTGGAAAATCTGCTGACTTGATGTTATGGAGGAACAAGAAAATCTCC
GCGAGCTTCATAACTGGTGCTACACTTATCTGGGTGCTCTTTGAATGGCTTAACTACCAT
TTTCTAACTCTTCTATGCTTCGCTGTGGTTCTTGGTATGATTGCACAGTTTGTTTGGTCA
AATGCATCGGGCGTATTCAGCAGGTCGTCATCTGAAGTCCCTCGTATCGTTTTGCCTGAC
GAGTTATTTCAAAATATTGGTGTCGCAGTTGGTGTTCAGATTAACCAAGCCTTGGGTTTT
CTTCAAGATGTTGCTTGTGGAGGAAATCTGAAGCAATTTCTTTTGGTTGTAGTAAGCTTG
TGGGCAGCTGCTGTGATAGGGAGCTGGTGCAACTTTCTGACTGTTCTGTATGTTGGTTTC
ATTGCTGCCCACACACTGCCAGTTCTGTATGAGAGATATGAAGATCAAGTTGATGGGTTT
GTATACCAGGTCCTGGGACAGCTTCAGCACAACTACCGGAAGCTGGATTCTGGTTTCCTC
AGCAAAATACCCAAGGGAAGCCTCAAGGGAAAGAAGCATGAATAGATTCATATTGGTCCA
TTGGATCTGGGGCATCCTCCAAATCCATTTTCTTTTGTGTCCCACTAAACAAGACAGTCA
ATACTTGGGTATCTGAACAATGAAATGTGTCAGAGATTTCTTCCCTTTTTAAAGCAGCAT
GTTGTTGTAAATG