Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00940.t01
CDS Infomation

cds chromosome:12X:12:1444556:1450445:-1 gene:VIT_12s0028g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTGCTTCTTCGGCTGTTTTCGAATCAAAGACGATCACCAACATCGTCCCAATGCC
TCTTTCGTTTCTCAATCCAAATCCACTGAAACTATGATCTCTCAAAATCGATTATCCGCC
CTGTTTCTGGCTGAAGAGAAAGAAGACTCTCTGTCCAAGGATAGAAAAAGCCATGTTTTT
GGATCTTCAGAACCTGAAAACATTGACAAGGAGCTTAAGGATGAGGCCAGATTCCTTAAA
GCATGTGGCACTTTAGTGGAGACTCCAGCTGAAATTCGGAAAGCATCAAGGAGATTGAAA
AGTTCACCATCCCAGGATGGAGATTTAGAACATTCAAAATTCCATTCATGGCTTCCCAAC
ACATCCATCAAGAAGCTCCAATTGGACAAGCAACCAGTTGAGCCACCTACTCCCATTAAA
CAATGTGAAGAATGGAGAAAGGAGTCAAGTCTTTTAGAGCAAACACCTAGCAGCTGCATA
TCCAATGGACAGAGTTCTACTGAAGGCAGTACGGTAGGGAACAGTGATGTGGTCATCAAT
GTTCATCCTAATCCAGTTGATGACTCTGTACCTTCAGTTTCACCCTGGCTTTCAGCTCCA
AATGTTCAGCGCAGGAACAGGTCTGTTCGTTTTGAATGTGAGGCTGATGCAGCTCTATTT
TCCTCAGGAAGTGCTTCATCTGAAATTGCTAGCCAAACTTCAAAGAGATATGAATCACCA
AGTAATCATAGTGTATCTAAGCTTTCCCCTTACCCCACCCCGCTAAAACTAAATGATGAA
TTGCAAACGCCTGGAACTGTTTTCCCTGCGAGCCTGGGGAATTTAGAGAATGGGAAAAAT
GCTCGGATCAGGTCCCAGTATGTCTACTCAGTCCTGAACCCTGTTGAGAATTTTTCTCAG
TGGAGTGCATTGAAGGAAGAGGGTTCTCACTCAAATCAATTTTCAAGTAACATGGGAGAA
TCGCTGGAGTCGCTAGACGATGCTACCCCCAAGGCACATGTGGGGGCAAGAGAAACTTCA
GTTGCTGAAGATTTGAGAGTGGAAGCAAGCTTGTCTTCTTGGCTGAAGCCATCTTCTTCT
ATTCAGGATGCAAATGACCAAAATTTTGAGGCTGTTCCCGCTGCAAATCGTCATTTTGGG
AGAACTCCAGGTGACAGGCCTATCATTGGAACTGTTGCTGCTCATTGGAATGAAGATGAG
CCTACTCGTATCTCTCCCAAGTGGTGGGATGGTAATGGAATACCAAATTCCACTAATAAA
TATAAGGAGGATCAGAAAGTGAGTTGGCATGCAACCCCGTTCGAGGAGAGGTTAGAAAAG
GCATTATCAGAAGAGAGTATGATCTCTCAAAGGAAGCAAATTAATGGGGAACCGATAAAT
TTTGAAGAGAATGAGGAAAGCGACACAGCTTTATCTCAGTTGCAGTCTAGGAGTCATCCC
AAGTCAGTGGTTTCTTTCTGA

Peptide Sequence

PEP ID

VIT_12s0028g00940.t01
PEP Infomation

pep chromosome:12X:12:1444556:1450445:-1 gene:VIT_12s0028g00940 transcript:VIT_12s0028g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGCFFGCFRIKDDHQHRPNASFVSQSKSTETMISQNRLSALFLAEEKEDSLSKDRKSHVF
GSSEPENIDKELKDEARFLKACGTLVETPAEIRKASRRLKSSPSQDGDLEHSKFHSWLPN
TSIKKLQLDKQPVEPPTPIKQCEEWRKESSLLEQTPSSCISNGQSSTEGSTVGNSDVVIN
VHPNPVDDSVPSVSPWLSAPNVQRRNRSVRFECEADAALFSSGSASSEIASQTSKRYESP
SNHSVSKLSPYPTPLKLNDELQTPGTVFPASLGNLENGKNARIRSQYVYSVLNPVENFSQ
WSALKEEGSHSNQFSSNMGESLESLDDATPKAHVGARETSVAEDLRVEASLSSWLKPSSS
IQDANDQNFEAVPAANRHFGRTPGDRPIIGTVAAHWNEDEPTRISPKWWDGNGIPNSTNK
YKEDQKVSWHATPFEERLEKALSEESMISQRKQINGEPINFEENEESDTALSQLQSRSHP
KSVVSF

Transcript Sequence

Transcript ID

VIT_12s0028g00940.t01
Transcript Infomation

cdna chromosome:12X:12:1444556:1450445:-1 gene:VIT_12s0028g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAATCCTCGTCTTCCTTCGCTCTTTGTCTGAGATTTTTGATGATATGGTCATTACTGGA
GTGTGAATTAGGGTTTGTGAGCAGATTTGCGAGGGCAATGGGGTGCTTCTTCGGCTGTTT
TCGAATCAAAGACGATCACCAACATCGTCCCAATGCCTCTTTCGTTTCTCAATCCAAATC
CACTGAAACTATGATCTCTCAAAATCGATTATCCGCCCTGTTTCTGGCTGAAGAGAAAGA
AGACTCTCTGTCCAAGGATAGAAAAAGCCATGTTTTTGGATCTTCAGAACCTGAAAACAT
TGACAAGGAGCTTAAGGATGAGGCCAGATTCCTTAAAGCATGTGGCACTTTAGTGGAGAC
TCCAGCTGAAATTCGGAAAGCATCAAGGAGATTGAAAAGTTCACCATCCCAGGATGGAGA
TTTAGAACATTCAAAATTCCATTCATGGCTTCCCAACACATCCATCAAGAAGCTCCAATT
GGACAAGCAACCAGTTGAGCCACCTACTCCCATTAAACAATGTGAAGAATGGAGAAAGGA
GTCAAGTCTTTTAGAGCAAACACCTAGCAGCTGCATATCCAATGGACAGAGTTCTACTGA
AGGCAGTACGGTAGGGAACAGTGATGTGGTCATCAATGTTCATCCTAATCCAGTTGATGA
CTCTGTACCTTCAGTTTCACCCTGGCTTTCAGCTCCAAATGTTCAGCGCAGGAACAGGTC
TGTTCGTTTTGAATGTGAGGCTGATGCAGCTCTATTTTCCTCAGGAAGTGCTTCATCTGA
AATTGCTAGCCAAACTTCAAAGAGATATGAATCACCAAGTAATCATAGTGTATCTAAGCT
TTCCCCTTACCCCACCCCGCTAAAACTAAATGATGAATTGCAAACGCCTGGAACTGTTTT
CCCTGCGAGCCTGGGGAATTTAGAGAATGGGAAAAATGCTCGGATCAGGTCCCAGTATGT
CTACTCAGTCCTGAACCCTGTTGAGAATTTTTCTCAGTGGAGTGCATTGAAGGAAGAGGG
TTCTCACTCAAATCAATTTTCAAGTAACATGGGAGAATCGCTGGAGTCGCTAGACGATGC
TACCCCCAAGGCACATGTGGGGGCAAGAGAAACTTCAGTTGCTGAAGATTTGAGAGTGGA
AGCAAGCTTGTCTTCTTGGCTGAAGCCATCTTCTTCTATTCAGGATGCAAATGACCAAAA
TTTTGAGGCTGTTCCCGCTGCAAATCGTCATTTTGGGAGAACTCCAGGTGACAGGCCTAT
CATTGGAACTGTTGCTGCTCATTGGAATGAAGATGAGCCTACTCGTATCTCTCCCAAGTG
GTGGGATGGTAATGGAATACCAAATTCCACTAATAAATATAAGGAGGATCAGAAAGTGAG
TTGGCATGCAACCCCGTTCGAGGAGAGGTTAGAAAAGGCATTATCAGAAGAGAGTATGAT
CTCTCAAAGGAAGCAAATTAATGGGGAACCGATAAATTTTGAAGAGAATGAGGAAAGCGA
CACAGCTTTATCTCAGTTGCAGTCTAGGAGTCATCCCAAGTCAGTGGTTTCTTTCTGATA
AATGGTGATGGTGGATTGTCATTTGCTCTGTTCTGTTGTGACTTAAATGCAGGTCTGAAG
TATATCACATGAACTGTCATGGTGTCCCCCTGAACTATTGGGCTTAATTCTTGGAATGCA
GTCGTTGTTAATGGTTTAATGTCTGCAGCATGAGGAAGCTGCTTCCAGTGTACATAAGTT
GAGCAAACCTTTTGC