Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00830.t01
CDS Infomation

cds chromosome:12X:12:1365952:1380110:1 gene:VIT_12s0028g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCCAATGGCGGAGCTCAGAGAGCTGTAGACGCGGAGACCAGCTTGGAGAAGATC
AAGCGCCAGTTGGCCTCCGGTTCGGGGAGAAACTTATTGCAGGGTCCGCTTCTGAAGCGA
TCCGAAACATTGAGGAAATGGAACGAGCGGTGGGTGATCTTAGATCCTACAACAGGAAAG
ATGGAATACAAGATTCGGAGAAATGAGGTAGCTGTCAAGGGAACCATCATATTCGATGCC
TATAGCACAATTACTCTCTCTCCTGTGAATTTTCATGGACTACCAAAATATGATGGCTGC
TGTTTCTATATTGGGACCCCCCAGAAGAAAGACTATTTCCTTTGTGCAGAAACTCCTGGT
GCAGCCAGAGCTTGGGTATCTACTTTGCATGCAACACAGTTGGTTCTCAAGGCTCATAAA
GAGGCCGTGAATTCCTTAAGTGGGAATGGCTCTGCAAAGCTAGGAACGGTTGCAACTGTA
GTTGCTGCTGCTAATTCAACAGCACTGGAATGCTCTAAAGAAATTGAAGCAGCAATGCAA
ATTTCAATGCGAAATGCTTTGGGAGTGATGATGAATAAAACAAGTGATGGCCCAATGGAT
GATTTGACAATCATGAAGGAGACACTACGAGTAAAGGATGAGGAATTGCAGCATTTGGCC
AGGGACCTTCGGGCACGGGATTCAACAATTAAAGAGATAGCAGAGAAACTATCTGATACT
GCTGAAGCTGCAGAGGCTGCAGCATTGGCAGCACATACAATGGATGAACAAAGGCGAATG
GCTTGTGCAGAAATTGATCGTTTAAGAAAAGATTCAGAGAAGCAGCTTGGGTCATCCATG
TTGAAGCTGAAAGAGTTTGAAGAAAAGGTTATGGCTTTATGTAAAGAAAGGGATCAATTG
GTCAAGCAGAGAGATTCTGCGATCCAGGAGGCACATTTATGGCGCTCTGAGCTTGCAAAA
GCAAGAGAGCGTGTTGTAATATTAGAAGGTGCAGTTGTTAGAGCTGATGAGAAGGTCAGG
GTTGCAGAGGCAGATGCTGAAGCCAGGATAAAGGAAGCAGCACAGAAAGAGTCAGCTGCT
GTAAAGGAAAAGCAAGAGCTTTTGGCATATGTTAACATGTTACAAGCACAACTTCAAAGG
CAGCAGATTGATACAAAAAAGCAAGTCTTTGAGGAGAAGACCGAGTCTTGCTCTGATATT
GGCAACACTCGTCCCTTAACAAAGCATGTGGATTTGTCAGATGAGAATGTGGACAAAGCA
TGTCTTAGTGTTTCTAGAGCAGTCCCTGTTGGGGAGAATGTAGTCCACTTGGCCATGGAT
CAGGTTAATCTCCGACCAGTTGGAGATGGTGAATGGAGTGATATTCAAGCAACAGAAGCA
AGGATAGCTGATGTACGAGAAATTGCCCCTGAGACAGAAGGAAGCAGCTTGGACATTCCT
GTTGTTAGCCTACCAGTAAATAACCATCATGAACAAGGAGCAAACTCTTTTCATCAGCCG
TGA

Peptide Sequence

PEP ID

VIT_12s0028g00830.t01
PEP Infomation

pep chromosome:12X:12:1365952:1380110:1 gene:VIT_12s0028g00830 transcript:VIT_12s0028g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASNGGAQRAVDAETSLEKIKRQLASGSGRNLLQGPLLKRSETLRKWNERWVILDPTTGK
MEYKIRRNEVAVKGTIIFDAYSTITLSPVNFHGLPKYDGCCFYIGTPQKKDYFLCAETPG
AARAWVSTLHATQLVLKAHKEAVNSLSGNGSAKLGTVATVVAAANSTALECSKEIEAAMQ
ISMRNALGVMMNKTSDGPMDDLTIMKETLRVKDEELQHLARDLRARDSTIKEIAEKLSDT
AEAAEAAALAAHTMDEQRRMACAEIDRLRKDSEKQLGSSMLKLKEFEEKVMALCKERDQL
VKQRDSAIQEAHLWRSELAKARERVVILEGAVVRADEKVRVAEADAEARIKEAAQKESAA
VKEKQELLAYVNMLQAQLQRQQIDTKKQVFEEKTESCSDIGNTRPLTKHVDLSDENVDKA
CLSVSRAVPVGENVVHLAMDQVNLRPVGDGEWSDIQATEARIADVREIAPETEGSSLDIP
VVSLPVNNHHEQGANSFHQP

Transcript Sequence

Transcript ID

VIT_12s0028g00830.t01
Transcript Infomation

cdna chromosome:12X:12:1365952:1380110:1 gene:VIT_12s0028g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGTCACCACCAACAAGTCCATGAAATGAAACCTAACAGCCCCATCATCATCAAGAAGCCT
AAAACCCTTTGAGATTTCTCTCTGATCTCTCATTCGTCATGGCCTCCAATGGCGGAGCTC
AGAGAGCTGTAGACGCGGAGACCAGCTTGGAGAAGATCAAGCGCCAGTTGGCCTCCGGTT
CGGGGAGAAACTTATTGCAGGGTCCGCTTCTGAAGCGATCCGAAACATTGAGGAAATGGA
ACGAGCGGTGGGTGATCTTAGATCCTACAACAGGAAAGATGGAATACAAGATTCGGAGAA
ATGAGGTAGCTGTCAAGGGAACCATCATATTCGATGCCTATAGCACAATTACTCTCTCTC
CTGTGAATTTTCATGGACTACCAAAATATGATGGCTGCTGTTTCTATATTGGGACCCCCC
AGAAGAAAGACTATTTCCTTTGTGCAGAAACTCCTGGTGCAGCCAGAGCTTGGGTATCTA
CTTTGCATGCAACACAGTTGGTTCTCAAGGCTCATAAAGAGGCCGTGAATTCCTTAAGTG
GGAATGGCTCTGCAAAGCTAGGAACGGTTGCAACTGTAGTTGCTGCTGCTAATTCAACAG
CACTGGAATGCTCTAAAGAAATTGAAGCAGCAATGCAAATTTCAATGCGAAATGCTTTGG
GAGTGATGATGAATAAAACAAGTGATGGCCCAATGGATGATTTGACAATCATGAAGGAGA
CACTACGAGTAAAGGATGAGGAATTGCAGCATTTGGCCAGGGACCTTCGGGCACGGGATT
CAACAATTAAAGAGATAGCAGAGAAACTATCTGATACTGCTGAAGCTGCAGAGGCTGCAG
CATTGGCAGCACATACAATGGATGAACAAAGGCGAATGGCTTGTGCAGAAATTGATCGTT
TAAGAAAAGATTCAGAGAAGCAGCTTGGGTCATCCATGTTGAAGCTGAAAGAGTTTGAAG
AAAAGGTTATGGCTTTATGTAAAGAAAGGGATCAATTGGTCAAGCAGAGAGATTCTGCGA
TCCAGGAGGCACATTTATGGCGCTCTGAGCTTGCAAAAGCAAGAGAGCGTGTTGTAATAT
TAGAAGGTGCAGTTGTTAGAGCTGATGAGAAGGTCAGGGTTGCAGAGGCAGATGCTGAAG
CCAGGATAAAGGAAGCAGCACAGAAAGAGTCAGCTGCTGTAAAGGAAAAGCAAGAGCTTT
TGGCATATGTTAACATGTTACAAGCACAACTTCAAAGGCAGCAGATTGATACAAAAAAGC
AAGTCTTTGAGGAGAAGACCGAGTCTTGCTCTGATATTGGCAACACTCGTCCCTTAACAA
AGCATGTGGATTTGTCAGATGAGAATGTGGACAAAGCATGTCTTAGTGTTTCTAGAGCAG
TCCCTGTTGGGGAGAATGTAGTCCACTTGGCCATGGATCAGGTTAATCTCCGACCAGTTG
GAGATGGTGAATGGAGTGATATTCAAGCAACAGAAGCAAGGATAGCTGATGTACGAGAAA
TTGCCCCTGAGACAGAAGGAAGCAGCTTGGACATTCCTGTTGTTAGCCTACCAGTAAATA
ACCATCATGAACAAGGAGCAAACTCTTTTCATCAGCCGTGATATTTTCCTGATGTGGGGA
TAAACTCACCATCAAAGGTCAGTTATAGGAGGAATTGAAACTCTTGTTGCGTCTTTTAGT
TCCCTGTCTAGCATTTGATTTGTAAGTGAGATATCAACATGCTGGTTTAAAATTGAAGTT
GTGATACATGCCTTCTTCTTAATATAGGAAAATTAGACTTTCTC