Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00640.t01
CDS Infomation

cds chromosome:12X:12:1207511:1232515:1 gene:VIT_12s0028g00640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAAAAGCGAGGGACTTGGTGAAAAGCGTACCGCGCAGCTTCTCTACTGCTCGCACC
CCAACTCCGGCGCAAATGGATCCATCAGACCGCTACTGCTACAACCCCGTCTTGCGCTGG
AACCCTCAGGTGGAAGCCTACTTCTCCAAGGCATACGGTCCTCACCATTTCTCTCGCATC
ACTCAAGCCCTAGCGCGTCCATCTTGCTACTCTTGTATCCGTGTGAATACACTCAAATCA
ACAAGTGATGCTGTTATTGAGAAGCTATTGGCAATTATACAGGAAACAGAGCTTGGTAAC
ACTAAGAAAAGCTTGGAAACTGGTTCAATTTCTAAGTGCCAGTTACCCGGGCTAGACTAT
GTTGTCTTTGTCAGAGGTTCAGGACCACACACAATTGAATATGGCTATGAAATTGATAGA
CCTCCAAAGGAGGTTATTGTGAGTCGTAAATGTGCTGAGGCAGTTCTTCGAGGGGCTCAG
GTATATGTCCCTGGTGTATTGGCTTGCAGTTCTCATGTTGAGAAAGGGGATGTAGTTGCA
GTTTCAGTTGCTGTGGAGCAGCCTGGTACTGATGGTGGATGGGGTGTTGGTATAACACGT
GGGACTGTTCTACAGGGTCAGCAGACAGATCCTTATCATTTTGAACGAAATGCCCTTTAT
ATTGGCCAAGGGGCCACAATGATGTCAAGGGCTGGGATCTTCCGTGCTTCAGGAGGAATT
GCTGTGGATATGAATAATAGAGTATTTAAACTGCCTTCCTTTCATGATGTGCTTGAAGGG
GAAATATTTCTTCAAAACCTGCCAAGCATTGTCACTGCACATGCCCTAGATCCTCAACAG
GATGAGAGGATATTGGACATGTGTGCAGCCCCAGGAGGGAAAACTACTGCAATTGCTATC
CTTATGAAGGATCAAGGGGAGGTTATTGCAGTTGATAGATCTCACAACAAGGTGATGGAT
ATTCAGAAATTGGCTGCTGAGATGGGCTTGCATTGTATAACCACATATAAACTAGATGCT
CTTAAAGCTGTTTGTCGAAGCAATGAATCCAATGATATGACCACTCCATCTTGCAGAAAG
GATGCTGAGGGTGTAACTCTTCAAAGTTCAGACTCTCCAAGACTACAGATGGAGAAAAAT
CAATGCAGTACAGAAGCATTCGCTGCTGATTTTGCTTGCCAGGAAAATGTTATAAATGGA
GAAGGGAATCAAAGAACTTACACTAGCAAAGCTGATATCAGGAAGAATATTCGTCGAATG
AGAAATGGGCCAGGAAGAAATCAAGGCATGGGTGGTAGGGTTGAAAAATCAAAAGGTTTT
TCACCTAATAGTTTTGATCGAGTCCTCCTTGATGCCCCCTGTTCTGCCCTTGGCTTGAGA
CCTAGACTTTTTGCTGGCGAGGAGACTATAGAATCATTAAGGAACCATGCAAAGTACCAG
AGGAGGATGTTTGATCAGGCTGTTCAGCTAGTTCGCCCTGGTGGAGTCATTGTGTATTCC
ACTTGTACAATAAACCCTGGTGAGAATGAAGCGCTGGTTCGATATGCTCTCGACACATAC
AAGTTCCTCTCATTGGCATCACAGCATCCAAGAGCTGGAGGACCTGGCCTTGTTGGTTGT
TTTCAATTTTCTGATGGGTATACTGAGGAGTGGTTGAGACCTGGTGAGGAAGAACTCGTT
CAGAGGTTTGATCCATCATCCCCGCTTGATACAATAGGGTTTTTCATTGCCAAGTTCAAT
GTTGGCCCCAAAGACGCCTGA

Peptide Sequence

PEP ID

VIT_12s0028g00640.t01
PEP Infomation

pep chromosome:12X:12:1207511:1232515:1 gene:VIT_12s0028g00640 transcript:VIT_12s0028g00640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRKARDLVKSVPRSFSTARTPTPAQMDPSDRYCYNPVLRWNPQVEAYFSKAYGPHHFSRI
TQALARPSCYSCIRVNTLKSTSDAVIEKLLAIIQETELGNTKKSLETGSISKCQLPGLDY
VVFVRGSGPHTIEYGYEIDRPPKEVIVSRKCAEAVLRGAQVYVPGVLACSSHVEKGDVVA
VSVAVEQPGTDGGWGVGITRGTVLQGQQTDPYHFERNALYIGQGATMMSRAGIFRASGGI
AVDMNNRVFKLPSFHDVLEGEIFLQNLPSIVTAHALDPQQDERILDMCAAPGGKTTAIAI
LMKDQGEVIAVDRSHNKVMDIQKLAAEMGLHCITTYKLDALKAVCRSNESNDMTTPSCRK
DAEGVTLQSSDSPRLQMEKNQCSTEAFAADFACQENVINGEGNQRTYTSKADIRKNIRRM
RNGPGRNQGMGGRVEKSKGFSPNSFDRVLLDAPCSALGLRPRLFAGEETIESLRNHAKYQ
RRMFDQAVQLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLSLASQHPRAGGPGLVGC
FQFSDGYTEEWLRPGEEELVQRFDPSSPLDTIGFFIAKFNVGPKDA

Transcript Sequence

Transcript ID

VIT_12s0028g00640.t01
Transcript Infomation

cdna chromosome:12X:12:1207511:1232515:1 gene:VIT_12s0028g00640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAAAAGCGAGGGACTTGGTGAAAAGCGTACCGCGCAGCTTCTCTACTGCTCGCACC
CCAACTCCGGCGCAAATGGATCCATCAGACCGCTACTGCTACAACCCCGTCTTGCGCTGG
AACCCTCAGGTGGAAGCCTACTTCTCCAAGGCATACGGTCCTCACCATTTCTCTCGCATC
ACTCAAGCCCTAGCGCGTCCATCTTGCTACTCTTGTATCCGTGTGAATACACTCAAATCA
ACAAGTGATGCTGTTATTGAGAAGCTATTGGCAATTATACAGGAAACAGAGCTTGGTAAC
ACTAAGAAAAGCTTGGAAACTGGTTCAATTTCTAAGTGCCAGTTACCCGGGCTAGACTAT
GTTGTCTTTGTCAGAGGTTCAGGACCACACACAATTGAATATGGCTATGAAATTGATAGA
CCTCCAAAGGAGGTTATTGTGAGTCGTAAATGTGCTGAGGCAGTTCTTCGAGGGGCTCAG
GTATATGTCCCTGGTGTATTGGCTTGCAGTTCTCATGTTGAGAAAGGGGATGTAGTTGCA
GTTTCAGTTGCTGTGGAGCAGCCTGGTACTGATGGTGGATGGGGTGTTGGTATAACACGT
GGGACTGTTCTACAGGGTCAGCAGACAGATCCTTATCATTTTGAACGAAATGCCCTTTAT
ATTGGCCAAGGGGCCACAATGATGTCAAGGGCTGGGATCTTCCGTGCTTCAGGAGGAATT
GCTGTGGATATGAATAATAGAGTATTTAAACTGCCTTCCTTTCATGATGTGCTTGAAGGG
GAAATATTTCTTCAAAACCTGCCAAGCATTGTCACTGCACATGCCCTAGATCCTCAACAG
GATGAGAGGATATTGGACATGTGTGCAGCCCCAGGAGGGAAAACTACTGCAATTGCTATC
CTTATGAAGGATCAAGGGGAGGTTATTGCAGTTGATAGATCTCACAACAAGGTGATGGAT
ATTCAGAAATTGGCTGCTGAGATGGGCTTGCATTGTATAACCACATATAAACTAGATGCT
CTTAAAGCTGTTTGTCGAAGCAATGAATCCAATGATATGACCACTCCATCTTGCAGAAAG
GATGCTGAGGGTGTAACTCTTCAAAGTTCAGACTCTCCAAGACTACAGATGGAGAAAAAT
CAATGCAGTACAGAAGCATTCGCTGCTGATTTTGCTTGCCAGGAAAATGTTATAAATGGA
GAAGGGAATCAAAGAACTTACACTAGCAAAGCTGATATCAGGAAGAATATTCGTCGAATG
AGAAATGGGCCAGGAAGAAATCAAGGCATGGGTGGTAGGGTTGAAAAATCAAAAGGTTTT
TCACCTAATAGTTTTGATCGAGTCCTCCTTGATGCCCCCTGTTCTGCCCTTGGCTTGAGA
CCTAGACTTTTTGCTGGCGAGGAGACTATAGAATCATTAAGGAACCATGCAAAGTACCAG
AGGAGGATGTTTGATCAGGCTGTTCAGCTAGTTCGCCCTGGTGGAGTCATTGTGTATTCC
ACTTGTACAATAAACCCTGGTGAGAATGAAGCGCTGGTTCGATATGCTCTCGACACATAC
AAGTTCCTCTCATTGGCATCACAGCATCCAAGAGCTGGAGGACCTGGCCTTGTTGGTTGT
TTTCAATTTTCTGATGGGTATACTGAGGAGTGGTTGAGACCTGGTGAGGAAGAACTCGTT
CAGAGGTTTGATCCATCATCCCCGCTTGATACAATAGGGTTTTTCATTGCCAAGTTCAAT
GTTGGCCCCAAAGACGCCTGACTTCTCTTCAGAAAGTCTATAGCTTGGGAAATGGCTACA
TAAAATGGTTTTTGCCATGCATCTACCCTGCAAAGAGCAAAGATGGAAATTGTGGAGGAA
ATATCATCACCATTCCTTCTGCTTAACAAGATCTGGTTGGAATTCAACTTTTTAGAATGC
TGGATAAAAAGCAATTGTCATTATTTATCTCAAGGATACCACACCTTCACATCTGGTATG
TAGTCTATGGAGTCCATTGTATGCAATTGCGTGCATTAGGCAGGGAAGCGGAGCATGACC
TGTAACACCATAGCGAGCAGTCTGCTTGATTTCTTGTATCAGTTTTGGTCGATCCTGCCA
TTTCTGGATAGATTTTGGCAAACTAAATTCGAGTATAATGATAGTTGTAAACTTGGCACC
TGCTGGAAGCATGGTCAGTAGATTTTTGAAGCTAGGCACACAGGATTGAGTGTTTTCTAT
GGTCTGTAGCTGTAAGCTTTATGATGCCATCCTTTCTGTTTAGATCTTTGATGCATGTTT
TTGCCTATCATGTTCAGGCCTGATAGCTACAATATTGAATTCTTTGCTTTCTAATTTCTA
AAGAATTAAGGTTGCATTCAGAATGCTGAAATGGAGAATGGAATGAGAAATCAATTCCAT
TCTCATGCATGTGTTTGGATTCTTTTCAGACTGAGAAGAGAATTATAGGAATAAGACATT
CATTAGTGTGGAAACTAAATCCTACCTTCACT