Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00610.t01
CDS Infomation

cds chromosome:12X:12:1179524:1181678:-1 gene:VIT_12s0028g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGCTCAAGGTTTTCCTCCTCCTCGTTCTTCTGTTAGTCTGCGGCGCCGCCGGAACC
CACGATCACAAATCAAAGAATGGTTCTCACCTCGCCGGAATCGAATTTCCCGAGCACCCC
AGCTTCAATGCGGTCACAGCTTCAGCTACTACTGGGTGTAGCATCCCAAATTCGAAGAAA
TCGAATCCATCGCAAGATGAAGGGTTCGACAATTGTGATGACGATGTCGATGACGACGAG
GCGGAAGACGGCGACGGCGATGTGAAACAGACGGTGAAGCTAAACCTGAAGCGCCGGTCG
GCGGGCACAGAGAAGAAGGAATCGGTGGGTGTGTCAAAAATGAAGGACTTGGCAAGAATT
CAGACTCTCTACAAAAGAATGACTGAGAAAAAGAACCAAAACACGGTGTCAAGGCTGAAG
AAACAGCAATCGAAGCCCCAAGTAGCACCGCCAGCGGCGGCCCCGGAGTCCTCCGCAAGC
GTGTTCTCCGGCCAGCTCATTGCAACGTTGGAGTCCGGTGTGAGCCTTGGGTCAGGCGAG
TACTTCATTGATGTGTTTGTGGGTACACCTCCTAAGCATTTCTCTCTTATACTTGATACT
GGTAGTGATCTTAATTGGATTCAATGTGTGCCTTGTTACGAATGTTTTGAGCAAAATGGA
CCTCATTATGATCCTGGGCAGTCCTCTTCTTATCGCAATATCGGTTGCCATGATTCCCGG
TGCCACCTCGTTTCCTCTCCTGACCCTCCTCAGCCCTGCAAGGCTGAGAACCAGACCTGT
CCCTACTACTACTGGTACGGTGATAGTTCTAACACCACCGGTGATTTTGCTCTAGAAACT
TTCACTGTTAACCTCACCATGTCCTCTGGAAAGCCCGAATTGAGGAGGGTGGAGAATGTC
ATGTTTGGTTGTGGTCATTGGAATAGAGGCCTCTTTCATGGGGCTGCTGGATTGTTGGGA
TTGGGGAGGGGGCCACTCTCCTTCTCGTCCCAGCTCCAATCTCTGTATGGCCACTCTTTC
TCTTATTGTCTAGTCGATCGGAATAGTGATGCTAATGTCAGCAGTAAGTTGATTTTTGGT
GAGGACAAGGACCTCTTGAGCCATCCGGAGTTGAACTTCACTACTTTGGTTGCTGGGAAA
GAAAACCCAGTGGATACATTTTATTATGTCCAGATTAAATCCATTGTGGTTGGCGGAGAG
GTGGTCAATATTCCAGAGGAGAAGTGGCAGATTGCCACTGATGGCTCTGGTGGTACAATC
ATCGATTCAGGCACTACACTTAGCTACTTTGCTGAGCCTGCATATCAGGTTATCAAGGAG
GCATTTATGGCCAAGGTGAAAGGATACCCAGTAGTAAAGGATTTTCCTGTTTTGGAGCCT
TGTTACAATGTTACTGGGGTGGAGCAACCGGACCTGCCTGACTTTGGAATTGTCTTTAGT
GATGGAGCTGTCTGGAATTTCCCAGTTGAGAACTACTTTATTGAGATTGAACCAAGGGAA
GTTGTGTGTCTAGCGATTTTGGGAACCCCGCCTTCGGCCCTTTCAATAATTGGAAACTAC
CAGCAGCAGAATTTCCATATCTTGTATGATACAAAGAAGTCTAGGCTGGGCTTTGCACCG
ACAAAGTGTGCTGATGTCTGA

Peptide Sequence

PEP ID

VIT_12s0028g00610.t01
PEP Infomation

pep chromosome:12X:12:1179524:1181678:-1 gene:VIT_12s0028g00610 transcript:VIT_12s0028g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVLKVFLLLVLLLVCGAAGTHDHKSKNGSHLAGIEFPEHPSFNAVTASATTGCSIPNSKK
SNPSQDEGFDNCDDDVDDDEAEDGDGDVKQTVKLNLKRRSAGTEKKESVGVSKMKDLARI
QTLYKRMTEKKNQNTVSRLKKQQSKPQVAPPAAAPESSASVFSGQLIATLESGVSLGSGE
YFIDVFVGTPPKHFSLILDTGSDLNWIQCVPCYECFEQNGPHYDPGQSSSYRNIGCHDSR
CHLVSSPDPPQPCKAENQTCPYYYWYGDSSNTTGDFALETFTVNLTMSSGKPELRRVENV
MFGCGHWNRGLFHGAAGLLGLGRGPLSFSSQLQSLYGHSFSYCLVDRNSDANVSSKLIFG
EDKDLLSHPELNFTTLVAGKENPVDTFYYVQIKSIVVGGEVVNIPEEKWQIATDGSGGTI
IDSGTTLSYFAEPAYQVIKEAFMAKVKGYPVVKDFPVLEPCYNVTGVEQPDLPDFGIVFS
DGAVWNFPVENYFIEIEPREVVCLAILGTPPSALSIIGNYQQQNFHILYDTKKSRLGFAP
TKCADV

Transcript Sequence

Transcript ID

VIT_12s0028g00610.t01
Transcript Infomation

cdna chromosome:12X:12:1179524:1181678:-1 gene:VIT_12s0028g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTTCCATTATATAATTTCTCTCCTCTCAAACACACCCCATTTACTCTTTTCTTGTGTT
TCTTCTGTCTTTATTTTCTGGGCTTCTGTTTTCTGAATTCATTTACTCTTTTGATTTCGG
AACACCTTTTCTGGCATTTGCTAAAAGGTGAAAACATTTCTACCCTTTTCTGGGTCTACC
TTTTTGGTGTCTTTCTTATTTTCTCAGTGACCAAACAGGAGGGGATCAGCATCACCACCA
TGGTGCTCAAGGTTTTCCTCCTCCTCGTTCTTCTGTTAGTCTGCGGCGCCGCCGGAACCC
ACGATCACAAATCAAAGAATGGTTCTCACCTCGCCGGAATCGAATTTCCCGAGCACCCCA
GCTTCAATGCGGTCACAGCTTCAGCTACTACTGGGTGTAGCATCCCAAATTCGAAGAAAT
CGAATCCATCGCAAGATGAAGGGTTCGACAATTGTGATGACGATGTCGATGACGACGAGG
CGGAAGACGGCGACGGCGATGTGAAACAGACGGTGAAGCTAAACCTGAAGCGCCGGTCGG
CGGGCACAGAGAAGAAGGAATCGGTGGGTGTGTCAAAAATGAAGGACTTGGCAAGAATTC
AGACTCTCTACAAAAGAATGACTGAGAAAAAGAACCAAAACACGGTGTCAAGGCTGAAGA
AACAGCAATCGAAGCCCCAAGTAGCACCGCCAGCGGCGGCCCCGGAGTCCTCCGCAAGCG
TGTTCTCCGGCCAGCTCATTGCAACGTTGGAGTCCGGTGTGAGCCTTGGGTCAGGCGAGT
ACTTCATTGATGTGTTTGTGGGTACACCTCCTAAGCATTTCTCTCTTATACTTGATACTG
GTAGTGATCTTAATTGGATTCAATGTGTGCCTTGTTACGAATGTTTTGAGCAAAATGGAC
CTCATTATGATCCTGGGCAGTCCTCTTCTTATCGCAATATCGGTTGCCATGATTCCCGGT
GCCACCTCGTTTCCTCTCCTGACCCTCCTCAGCCCTGCAAGGCTGAGAACCAGACCTGTC
CCTACTACTACTGGTACGGTGATAGTTCTAACACCACCGGTGATTTTGCTCTAGAAACTT
TCACTGTTAACCTCACCATGTCCTCTGGAAAGCCCGAATTGAGGAGGGTGGAGAATGTCA
TGTTTGGTTGTGGTCATTGGAATAGAGGCCTCTTTCATGGGGCTGCTGGATTGTTGGGAT
TGGGGAGGGGGCCACTCTCCTTCTCGTCCCAGCTCCAATCTCTGTATGGCCACTCTTTCT
CTTATTGTCTAGTCGATCGGAATAGTGATGCTAATGTCAGCAGTAAGTTGATTTTTGGTG
AGGACAAGGACCTCTTGAGCCATCCGGAGTTGAACTTCACTACTTTGGTTGCTGGGAAAG
AAAACCCAGTGGATACATTTTATTATGTCCAGATTAAATCCATTGTGGTTGGCGGAGAGG
TGGTCAATATTCCAGAGGAGAAGTGGCAGATTGCCACTGATGGCTCTGGTGGTACAATCA
TCGATTCAGGCACTACACTTAGCTACTTTGCTGAGCCTGCATATCAGGTTATCAAGGAGG
CATTTATGGCCAAGGTGAAAGGATACCCAGTAGTAAAGGATTTTCCTGTTTTGGAGCCTT
GTTACAATGTTACTGGGGTGGAGCAACCGGACCTGCCTGACTTTGGAATTGTCTTTAGTG
ATGGAGCTGTCTGGAATTTCCCAGTTGAGAACTACTTTATTGAGATTGAACCAAGGGAAG
TTGTGTGTCTAGCGATTTTGGGAACCCCGCCTTCGGCCCTTTCAATAATTGGAAACTACC
AGCAGCAGAATTTCCATATCTTGTATGATACAAAGAAGTCTAGGCTGGGCTTTGCACCGA
CAAAGTGTGCTGATGTCTGACATTGCTAAGCATTTGGGTGGTAGGAGAAAAAACTCTTAA
CATAACAGGTGCAGGAGGGCGATTGTCTGGTTCTTGTTTAAAGTGGTAACACAAATGAAA
TTGAATTCATTTTTTTTTCCTTCTGTTGAAGTTCAGGTGACTGCATACTTATAAGCAGGG
ATCACTGGTGCATAACGGTTCCATCAAGAGAAATTTTAATGTATTTATCATTTTAACCGC
TCCACTTTGGATCCCTTTTTGGCTTGAAATTGTTGTTTGACGGTGAATACTATCA