Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00580.t01
CDS Infomation

cds chromosome:12X:12_random:1168664:1177316:1 gene:VIT_12s0028g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCCTCCGCCGGTGCTACGGCCACCTTAGCTCCTCTACTTCTCCGAAACCTCTTC
ACATCGATCTTCATCTACGCGGACCAGTCTTTATTAAACTTAGCCAGAAAGTGTAAATTC
CTGGAATTTCTCCGTTCCTTCCTCATCTCCACCTTCCTCTTCTTCCTGCATCTCCTCCCT
TCTCTTTTTCCTCAAAACCGCACCTCCAAAGCTCCAAAAACTGATCAAAGCTACGTGGCG
GCCACCGCAGCTGGCGGCGGTGGCGACTCTGGGATCGCTCGAGCACTTTCTCAGGTGCTG
TCCATCGTCAGCGATATCCCCGTCAGCTCCCGCAAGTACGAAGTTGTTCGATCCTTAGCG
GAGAGGCTCATCGATGAGAACCTCCAGGAGGGTTTGGAGGCTCTCCGCGAAGTCAACCGG
ACGGTCCTGTCGGCTTCGTTTGCGAGGACGCTTAATCAGCTTGAAGCCGCCATGGCGGAG
CAGCGTGGTGGGGCAGCGGATGGGTGTGGACGAGTGGACTACGGGTTGAACCGGGTTTTT
AGGGCGGTTAGGTCGGCTGGTGATGTGGCGTGGAGTAGGGTTGGGTGGAGGAGGGAAGAG
GTGAGCCGGAAAGGAAGTTCAGCTGAGAAGCTGGCGGCTGAGCTGCTTTGGTTGGCGCAG
AAGATGGAGGCTAGTGGGAGTGGTGAGGAGGCGGTCTGTTTGTGGGCATCGGCTTCTAAT
CTGGCTTGGCTCGCGCTCTCAGCTGAGGCGCGACTACAGGGCTCGTTAGTCAAGGTCTCA
GCACATTTGTTCAAGCAAGCAAAAGAAATGGGAAGAGAAGAAGAGGAGAACATCAAGAAA
GAGCAACGAAGGCAAACAAACATGAAGATGCTAATGTCTTGGCTTCCATTATTATGTCGA
GGGAGCAATGGCACTGATACACCAGTGTTGAGCATCAGTGAAAGAGCAGAGCTTGAAAAA
GTATTGGAGGAGATTATAGAGATGTTGGAGCAAGAAGAAGAGCAAGAGAAAGTGTTATCT
TTGTGGCTCCACCACTTCACATATTGCCCTTCCTCTGATTGGCCTAACCTCCTTGCTTCC
TATACTCGATGGTGCACTACTTCTCGCAAACTTATACCCCTTCATTGA

Peptide Sequence

PEP ID

VIT_12s0028g00580.t01
PEP Infomation

pep chromosome:12X:12_random:1168664:1177316:1 gene:VIT_12s0028g00580 transcript:VIT_12s0028g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASAGATATLAPLLLRNLFTSIFIYADQSLLNLARKCKFLEFLRSFLISTFLFFLHLLP
SLFPQNRTSKAPKTDQSYVAATAAGGGGDSGIARALSQVLSIVSDIPVSSRKYEVVRSLA
ERLIDENLQEGLEALREVNRTVLSASFARTLNQLEAAMAEQRGGAADGCGRVDYGLNRVF
RAVRSAGDVAWSRVGWRREEVSRKGSSAEKLAAELLWLAQKMEASGSGEEAVCLWASASN
LAWLALSAEARLQGSLVKVSAHLFKQAKEMGREEEENIKKEQRRQTNMKMLMSWLPLLCR
GSNGTDTPVLSISERAELEKVLEEIIEMLEQEEEQEKVLSLWLHHFTYCPSSDWPNLLAS
YTRWCTTSRKLIPLH

Transcript Sequence

Transcript ID

VIT_12s0028g00580.t01
Transcript Infomation

cdna chromosome:12X:12_random:1168664:1177316:1 gene:VIT_12s0028g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTCAAACACGAAATCCACCATTCATCATGTTCCATGACCACCGCCACCGCGCATCTCAT
TCCGGTCCAAAGTCTCACACACGAAATCCACCATTCATTATGTTTTCATGACCACCACGC
ATCTCATTTATTGACTATTCAACTTTTGCTTTTCCTCTTCCGAAACACAACCCAATTGCA
GAGTAAAATCAAATGGCCGCCTCCGCCGGTGCTACGGCCACCTTAGCTCCTCTACTTCTC
CGAAACCTCTTCACATCGATCTTCATCTACGCGGACCAGTCTTTATTAAACTTAGCCAGA
AAGTGTAAATTCCTGGAATTTCTCCGTTCCTTCCTCATCTCCACCTTCCTCTTCTTCCTG
CATCTCCTCCCTTCTCTTTTTCCTCAAAACCGCACCTCCAAAGCTCCAAAAACTGATCAA
AGCTACGTGGCGGCCACCGCAGCTGGCGGCGGTGGCGACTCTGGGATCGCTCGAGCACTT
TCTCAGGTGCTGTCCATCGTCAGCGATATCCCCGTCAGCTCCCGCAAGTACGAAGTTGTT
CGATCCTTAGCGGAGAGGCTCATCGATGAGAACCTCCAGGAGGGTTTGGAGGCTCTCCGC
GAAGTCAACCGGACGGTCCTGTCGGCTTCGTTTGCGAGGACGCTTAATCAGCTTGAAGCC
GCCATGGCGGAGCAGCGTGGTGGGGCAGCGGATGGGTGTGGACGAGTGGACTACGGGTTG
AACCGGGTTTTTAGGGCGGTTAGGTCGGCTGGTGATGTGGCGTGGAGTAGGGTTGGGTGG
AGGAGGGAAGAGGTGAGCCGGAAAGGAAGTTCAGCTGAGAAGCTGGCGGCTGAGCTGCTT
TGGTTGGCGCAGAAGATGGAGGCTAGTGGGAGTGGTGAGGAGGCGGTCTGTTTGTGGGCA
TCGGCTTCTAATCTGGCTTGGCTCGCGCTCTCAGCTGAGGCGCGACTACAGGGCTCGTTA
GTCAAGGTCTCAGCACATTTGTTCAAGCAAGCAAAAGAAATGGGAAGAGAAGAAGAGGAG
AACATCAAGAAAGAGCAACGAAGGCAAACAAACATGAAGATGCTAATGTCTTGGCTTCCA
TTATTATGTCGAGGGAGCAATGGCACTGATACACCAGTGTTGAGCATCAGTGAAAGAGCA
GAGCTTGAAAAAGTATTGGAGGAGATTATAGAGATGTTGGAGCAAGAAGAAGAGCAAGAG
AAAGTGTTATCTTTGTGGCTCCACCACTTCACATATTGCCCTTCCTCTGATTGGCCTAAC
CTCCTTGCTTCCTATACTCGATGGTGCACTACTTCTCGCAAACTTATACCCCTTCATTGA
AACTAATAAAGGTTTATTAAAAATGATGTAAGTTCTTTATTAATTAAGTAAACAATGATG
CATCTCTCTCTCTCTCTCTCTTTAT