Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00570.t01
CDS Infomation

cds chromosome:12X:12:1154061:1168481:1 gene:VIT_12s0028g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAACGTCTCGGTGGCTGCAGAATGGCAGCTACTCTACAACAGGTACTACCGGAAG
CCGGAAATCTACCCAATGCAGTGGAAGCACATCGACCTCAGTCGAAACAAGGTTGCCGGT
GCCCCCTTCGGCGGCCCAATTGCCGTCATCCGTGACGACTCCAAGATCGTCCAGCTCTAC
GCCGAATCCGCCCTCCGAAAACTCCGAATCTTCAACTCCGCCGGCGTCCAAATCTCCGAA
ACCGTCTGGAAACACCCTGGCGGCCGCCTCGTCGGCATGGCGTGGACTGACGATCAAACT
CTCATCTGCGTAGTTCAAGACGGCACCGTTTTTAGGTACAATGTTCATGCTGAGCTCCAA
GAGCCGAACATTTCAATGGGCAAGGAGTGTTTTGAGCAAAATGTGGTTGAGTGTGTGTTT
TGGGGCAATGGAATGGTCTGTATAACTGAGGCCAATCAAATTTTCTGTATATCGGATTTC
AAGAATCCAAATCCGTGTAAGCTTGCTGACCCAAATTTGGATGAGTATCCGCTTTGTGTA
GCGGTGATCGAGCCGCAGTACACAATGTCGGGCAATGTGGAAGTGCTTCTTGCGGTGGAT
GATCTTGTCTTGCTTGTTGAGGAGGATGGTGTTCAGCAGTTGGGAGCTGGAATTGGGCCG
CTGCAGAAAATGGTGGTGTCGCGGAATGGGAAGTTGCTGGCATCATTTACACATGATGGA
CGGCTTTTAGTTATATCCACAGATTTTTCGAAGATCATTTTTGAGTACAGTTGTGAGTCA
GCTCTTCCTCCTGACCAGCTATCTTGGTGTGGAATGGATAGTGTGCTACTTTATTGGGAT
GATATGCTTTTGATGGTGGGTCCTTATGGGGATCCAGTGCGCTATCTTTATGATGAACCG
ATAATTCTTATCCCAGAGTGTGATGGAGTGAGAATACTTTCAAATACAAGCATGGAATTT
CTGCAACGAGTTCCTGATTCCACCGTGTCCATCTTTAAGATTGGAAGCACGCTACCTGCA
GCCTTATTGTATGATGCCTTGGATCATTTTGATCGGCGTAGTGCCAAGGCGGATGAAAAT
TTGAGATTGATTCGCTCATCCTTGCCTGAGGCTGTTGAAGCATGTATTGATGCTGCTGGT
CATGAATTTGATGTTTCACGGCAACGTACACTACTAAGAGCTGCGAGCTATGGCCAAGCC
TTTTGCAGCCATGTTCAACGTGATCGTTTTCAAGTGATGTGTAAGACTCTACGGGTCTTG
AATGCTGTCCACAACAGTGAGATTGGGATCCCTCTTAGTATTCAGCAATACAAGTTGCTT
ACAGCACCAGTTCTGATTGGTCGATTGATTAATATGCATCAACACCTTCTTGCATTACGG
ATATCAGAATATCTTGGCATGAACCAAGAGGTGGTGATAATGCATTGGGCATGTTCAAAG
ATAACGGCGTCATTAGCAATTCCTGATGCCACTCTCCTTGAAATCTTACTTGATAAGCTC
AGATTATGCAAAGGCATATCTTTTGCAGCTGTTGCTGCTCATGCAGATAAAAATGGCCGT
CGGAAACTAGCTGCTATGCTTGTTGAACATGAATCACGTTCTTCCAAGCAGGTTCCTCTC
TTGTTAAGCATAGGGGAGGAAGATACAGCTCTGACTAAGGCAACTGAAAGTGGTGATACT
GACCTTGTTTATCTAGTTCTCTTTCATATTTGGCAGAAGAGGCCTGCACTGGAGTATTTT
GGAATGATACAGGCCAGACCCCTGGCACGCGATTTGTTCATAACTTATGCAAGGTGTTAT
AAGCATGAATTCCTAAAGGACTTCTTTCTATCTACTGGGCAGCTTCAAGATGTTGCTTTT
CTGTTATGGAAAGAGTCGTGGGAACTAGGAAAGAATCCAATGGCAAGCAAAGGATCTCCA
CTTCATGGTCCACGGATCAAGATAATTGAAAAGGCCCAAAGTCTTTTCTCAGAAACCAAA
GAACATACCTTTGAGTCAAAGGCTGCTGAAGAGCATGCTAAATTGATAAGAATTCAACAT
GAGTTAGAAGTGACTACTAAGCAGGCCATTTTTGTTGATTCAAGTATCAGTGATACGATT
CGCACATGTATTGTACTGGGAAATCATCGTGCTGCAATGAAGGTTAAAACAGAATTCAAG
GTTTCTGAAAAGAGATGGTACTGGCTTAAAGTTTTTGCTTTGGCTACAATCAGAGATTGG
GATGCCCTAGAAAAGTTCTCAAAGGAGAAGAGACCACCAATTGGTTATCGGCCTTTTGTG
GAGGCTTGCATTGATGCAGATGAGAAAGGTGAAGCACTAAAATATATTCCCAAACTTACA
GATCCACGGGAAAGAGCTGAGTCTTATGCTCGGATTGGCATGGCCAAGGAAGCTGCAGAT
GCTGCTTCTCAGGCAAAGGATGGTGAATTGCTTGGTCGATTGAAGTTGACTTTTGCACAA
AATGCTGCAGCTTCATCAATATTTGATACTCTTCGGGACAGATTAGGAGTCGCTTAA

Peptide Sequence

PEP ID

VIT_12s0028g00570.t01
PEP Infomation

pep chromosome:12X:12:1154061:1168481:1 gene:VIT_12s0028g00570 transcript:VIT_12s0028g00570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANVSVAAEWQLLYNRYYRKPEIYPMQWKHIDLSRNKVAGAPFGGPIAVIRDDSKIVQLY
AESALRKLRIFNSAGVQISETVWKHPGGRLVGMAWTDDQTLICVVQDGTVFRYNVHAELQ
EPNISMGKECFEQNVVECVFWGNGMVCITEANQIFCISDFKNPNPCKLADPNLDEYPLCV
AVIEPQYTMSGNVEVLLAVDDLVLLVEEDGVQQLGAGIGPLQKMVVSRNGKLLASFTHDG
RLLVISTDFSKIIFEYSCESALPPDQLSWCGMDSVLLYWDDMLLMVGPYGDPVRYLYDEP
IILIPECDGVRILSNTSMEFLQRVPDSTVSIFKIGSTLPAALLYDALDHFDRRSAKADEN
LRLIRSSLPEAVEACIDAAGHEFDVSRQRTLLRAASYGQAFCSHVQRDRFQVMCKTLRVL
NAVHNSEIGIPLSIQQYKLLTAPVLIGRLINMHQHLLALRISEYLGMNQEVVIMHWACSK
ITASLAIPDATLLEILLDKLRLCKGISFAAVAAHADKNGRRKLAAMLVEHESRSSKQVPL
LLSIGEEDTALTKATESGDTDLVYLVLFHIWQKRPALEYFGMIQARPLARDLFITYARCY
KHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKIIEKAQSLFSETK
EHTFESKAAEEHAKLIRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFK
VSEKRWYWLKVFALATIRDWDALEKFSKEKRPPIGYRPFVEACIDADEKGEALKYIPKLT
DPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLGVA

Transcript Sequence

Transcript ID

VIT_12s0028g00570.t01
Transcript Infomation

cdna chromosome:12X:12:1154061:1168481:1 gene:VIT_12s0028g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAACGTCTCGGTGGCTGCAGAATGGCAGCTACTCTACAACAGGTACTACCGGAAG
CCGGAAATCTACCCAATGCAGTGGAAGCACATCGACCTCAGTCGAAACAAGGTTGCCGGT
GCCCCCTTCGGCGGCCCAATTGCCGTCATCCGTGACGACTCCAAGATCGTCCAGCTCTAC
GCCGAATCCGCCCTCCGAAAACTCCGAATCTTCAACTCCGCCGGCGTCCAAATCTCCGAA
ACCGTCTGGAAACACCCTGGCGGCCGCCTCGTCGGCATGGCGTGGACTGACGATCAAACT
CTCATCTGCGTAGTTCAAGACGGCACCGTTTTTAGGTACAATGTTCATGCTGAGCTCCAA
GAGCCGAACATTTCAATGGGCAAGGAGTGTTTTGAGCAAAATGTGGTTGAGTGTGTGTTT
TGGGGCAATGGAATGGTCTGTATAACTGAGGCCAATCAAATTTTCTGTATATCGGATTTC
AAGAATCCAAATCCGTGTAAGCTTGCTGACCCAAATTTGGATGAGTATCCGCTTTGTGTA
GCGGTGATCGAGCCGCAGTACACAATGTCGGGCAATGTGGAAGTGCTTCTTGCGGTGGAT
GATCTTGTCTTGCTTGTTGAGGAGGATGGTGTTCAGCAGTTGGGAGCTGGAATTGGGCCG
CTGCAGAAAATGGTGGTGTCGCGGAATGGGAAGTTGCTGGCATCATTTACACATGATGGA
CGGCTTTTAGTTATATCCACAGATTTTTCGAAGATCATTTTTGAGTACAGTTGTGAGTCA
GCTCTTCCTCCTGACCAGCTATCTTGGTGTGGAATGGATAGTGTGCTACTTTATTGGGAT
GATATGCTTTTGATGGTGGGTCCTTATGGGGATCCAGTGCGCTATCTTTATGATGAACCG
ATAATTCTTATCCCAGAGTGTGATGGAGTGAGAATACTTTCAAATACAAGCATGGAATTT
CTGCAACGAGTTCCTGATTCCACCGTGTCCATCTTTAAGATTGGAAGCACGCTACCTGCA
GCCTTATTGTATGATGCCTTGGATCATTTTGATCGGCGTAGTGCCAAGGCGGATGAAAAT
TTGAGATTGATTCGCTCATCCTTGCCTGAGGCTGTTGAAGCATGTATTGATGCTGCTGGT
CATGAATTTGATGTTTCACGGCAACGTACACTACTAAGAGCTGCGAGCTATGGCCAAGCC
TTTTGCAGCCATGTTCAACGTGATCGTTTTCAAGTGATGTGTAAGACTCTACGGGTCTTG
AATGCTGTCCACAACAGTGAGATTGGGATCCCTCTTAGTATTCAGCAATACAAGTTGCTT
ACAGCACCAGTTCTGATTGGTCGATTGATTAATATGCATCAACACCTTCTTGCATTACGG
ATATCAGAATATCTTGGCATGAACCAAGAGGTGGTGATAATGCATTGGGCATGTTCAAAG
ATAACGGCGTCATTAGCAATTCCTGATGCCACTCTCCTTGAAATCTTACTTGATAAGCTC
AGATTATGCAAAGGCATATCTTTTGCAGCTGTTGCTGCTCATGCAGATAAAAATGGCCGT
CGGAAACTAGCTGCTATGCTTGTTGAACATGAATCACGTTCTTCCAAGCAGGTTCCTCTC
TTGTTAAGCATAGGGGAGGAAGATACAGCTCTGACTAAGGCAACTGAAAGTGGTGATACT
GACCTTGTTTATCTAGTTCTCTTTCATATTTGGCAGAAGAGGCCTGCACTGGAGTATTTT
GGAATGATACAGGCCAGACCCCTGGCACGCGATTTGTTCATAACTTATGCAAGGTGTTAT
AAGCATGAATTCCTAAAGGACTTCTTTCTATCTACTGGGCAGCTTCAAGATGTTGCTTTT
CTGTTATGGAAAGAGTCGTGGGAACTAGGAAAGAATCCAATGGCAAGCAAAGGATCTCCA
CTTCATGGTCCACGGATCAAGATAATTGAAAAGGCCCAAAGTCTTTTCTCAGAAACCAAA
GAACATACCTTTGAGTCAAAGGCTGCTGAAGAGCATGCTAAATTGATAAGAATTCAACAT
GAGTTAGAAGTGACTACTAAGCAGGCCATTTTTGTTGATTCAAGTATCAGTGATACGATT
CGCACATGTATTGTACTGGGAAATCATCGTGCTGCAATGAAGGTTAAAACAGAATTCAAG
GTTTCTGAAAAGAGATGGTACTGGCTTAAAGTTTTTGCTTTGGCTACAATCAGAGATTGG
GATGCCCTAGAAAAGTTCTCAAAGGAGAAGAGACCACCAATTGGTTATCGGCCTTTTGTG
GAGGCTTGCATTGATGCAGATGAGAAAGGTGAAGCACTAAAATATATTCCCAAACTTACA
GATCCACGGGAAAGAGCTGAGTCTTATGCTCGGATTGGCATGGCCAAGGAAGCTGCAGAT
GCTGCTTCTCAGGCAAAGGATGGTGAATTGCTTGGTCGATTGAAGTTGACTTTTGCACAA
AATGCTGCAGCTTCATCAATATTTGATACTCTTCGGGACAGATTAGGAGTCGCTTAATCT
ATTCTTCCCCCATTTGTTTTTCTCTTACCTTTCCCCTTTATTTGCATTTTGGTTTCAGTT
TTGTATGCGTGTTGTGTGCATATCTTTTTAACTTAAGTCTTGGGCTGACACAAGGTCAGA
TGCTCTGTGACTATGTGGTTGAAACCACTGAATCTACAGCTTGTAATCTTTTAGAAGTTG
GTTTTTTAAGGGAATCGGATTTTAAGTTGCCACTGAGGAACCTGCTTGGGCATGGTGAAT
CATCTTTTTTATTTTCTTTGTATATTAAATCTTTGTATGAATACAGTTAACTTCCTTTGC
CGGTTGTCTAAAAGAAGCCAATCCTTCCATGA