Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00510.t01
CDS Infomation

cds chromosome:12X:12:1111591:1114754:-1 gene:VIT_12s0028g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAAGTGCAGCGCAGAGGATGAAACAGCGGCAGAGGAGGCGGTGGTGGAGGTGGAG
GCGGCTCATCCCTACGCATTCCATGTGTCTGGACCTCGCAACGTGTCTTCACCCAACTGG
AGAGACCTCATCAATTCTAGTTGGAAAGACGGGAACTACAAAAGGACAGTAATTGCCTGC
TTCATACAAGCAGTCTACTTGCTTGAACTCGACAGACAAGAGAACAGAACAGAAGAGAAT
GCTCTTGCTCCCAAGTGGTGGATTCCCTTCAAGTACAAGTTGGCACAGACCTTGGTTGAT
GAAAGAGATGGATCCATATTTGGTGCAATTCTAGAATGGGACCGAGCTGCAGCCTTGTCT
GACTTAATCCTCATCAGACCCAGTGGCGCGCCTAGGGCTGTTCTAGCACTAAGAGGGACA
TTACTCAAGAGCCCAACAATTAGAAGAGACATTGAGGATGATCTCCGCTTTCTGGCTTGG
GAAAGCTTAAAGGGTTCTGTCAGATTCAAAGGAGCTTTTGAAGCATTAAAATCAGTTGCA
GACAGGTATGGAAGCAGCAATGTGTGTGTTGCAGGCCATTCCTTAGGAGCTGGGTTTGCC
CTCCAAGTAGGGAAAACGCTAGCCAAAGAAGGAATATTTGTGGACACCCATTTGTTCAAC
CCTCCCTCTGTTTCCCTAGCAATGAGTCTGAGAAACATAGGAGAAAAAGCTGGGTTTGCT
TGGCAGAGATTCAAATCAATGCTCCCTTCAAGCAGTGAAACTCAGGTCAGCAATGAAGAC
TGGGGGCAAACTCCCAGTGTAGGAGGAAAGAAGTGGGTGCCTCATCTATACGTGAACAAC
AGTGACTACATCTGTTGCCATTACACCGACCCAACAGGAGCAGAAGACAACAATGGAGAA
AAGGAGAACGTCTGTCCAACAAACGGGCCCATGGCAGCGAAGCTGTTTGTGATGTCCAAG
GGAAAACAGAAGTTCATGGAGGCTCATGGGCTGCAACAATGGTGGTCTGAAGACTTGGAA
CTCCAACTAGCTCTGCACAACAGCAAGCTTATTAACAGGCAGCTCAAATCTTTGTATACC
CTGCCAGCACCAGCAGCTCCACAACAAGCACAAGCAAAGCCTTGA

Peptide Sequence

PEP ID

VIT_12s0028g00510.t01
PEP Infomation

pep chromosome:12X:12:1111591:1114754:-1 gene:VIT_12s0028g00510 transcript:VIT_12s0028g00510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKCSAEDETAAEEAVVEVEAAHPYAFHVSGPRNVSSPNWRDLINSSWKDGNYKRTVIAC
FIQAVYLLELDRQENRTEENALAPKWWIPFKYKLAQTLVDERDGSIFGAILEWDRAAALS
DLILIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESLKGSVRFKGAFEALKSVA
DRYGSSNVCVAGHSLGAGFALQVGKTLAKEGIFVDTHLFNPPSVSLAMSLRNIGEKAGFA
WQRFKSMLPSSSETQVSNEDWGQTPSVGGKKWVPHLYVNNSDYICCHYTDPTGAEDNNGE
KENVCPTNGPMAAKLFVMSKGKQKFMEAHGLQQWWSEDLELQLALHNSKLINRQLKSLYT
LPAPAAPQQAQAKP

Transcript Sequence

Transcript ID

VIT_12s0028g00510.t01
Transcript Infomation

cdna chromosome:12X:12:1111591:1114754:-1 gene:VIT_12s0028g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGAGGAAGAAGAATATAGTGGTGGAGGAGGTGGTTATAGCGGTGGGTTCATGGCAAA
GTGCAGCGCAGAGGATGAAACAGCGGCAGAGGAGGCGGTGGTGGAGGTGGAGGCGGCTCA
TCCCTACGCATTCCATGTGTCTGGACCTCGCAACGTGTCTTCACCCAACTGGAGAGACCT
CATCAATTCTAGTTGGAAAGACGGGAACTACAAAAGGACAGTAATTGCCTGCTTCATACA
AGCAGTCTACTTGCTTGAACTCGACAGACAAGAGAACAGAACAGAAGAGAATGCTCTTGC
TCCCAAGTGGTGGATTCCCTTCAAGTACAAGTTGGCACAGACCTTGGTTGATGAAAGAGA
TGGATCCATATTTGGTGCAATTCTAGAATGGGACCGAGCTGCAGCCTTGTCTGACTTAAT
CCTCATCAGACCCAGTGGCGCGCCTAGGGCTGTTCTAGCACTAAGAGGGACATTACTCAA
GAGCCCAACAATTAGAAGAGACATTGAGGATGATCTCCGCTTTCTGGCTTGGGAAAGCTT
AAAGGGTTCTGTCAGATTCAAAGGAGCTTTTGAAGCATTAAAATCAGTTGCAGACAGGTA
TGGAAGCAGCAATGTGTGTGTTGCAGGCCATTCCTTAGGAGCTGGGTTTGCCCTCCAAGT
AGGGAAAACGCTAGCCAAAGAAGGAATATTTGTGGACACCCATTTGTTCAACCCTCCCTC
TGTTTCCCTAGCAATGAGTCTGAGAAACATAGGAGAAAAAGCTGGGTTTGCTTGGCAGAG
ATTCAAATCAATGCTCCCTTCAAGCAGTGAAACTCAGGTCAGCAATGAAGACTGGGGGCA
AACTCCCAGTGTAGGAGGAAAGAAGTGGGTGCCTCATCTATACGTGAACAACAGTGACTA
CATCTGTTGCCATTACACCGACCCAACAGGAGCAGAAGACAACAATGGAGAAAAGGAGAA
CGTCTGTCCAACAAACGGGCCCATGGCAGCGAAGCTGTTTGTGATGTCCAAGGGAAAACA
GAAGTTCATGGAGGCTCATGGGCTGCAACAATGGTGGTCTGAAGACTTGGAACTCCAACT
AGCTCTGCACAACAGCAAGCTTATTAACAGGCAGCTCAAATCTTTGTATACCCTGCCAGC
ACCAGCAGCTCCACAACAAGCACAAGCAAAGCCTTGATAAACACAAGAAAGGTCTTCTTG
ATTCCTAAAAATAGCTCATTTTGAATCTCCAGGGTTCATGGATGGATTTGGCTCATTTTG
ATTGGTTGTGTTGGGGTGGGTTGTTTGTAACAAT