Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00110.t01
CDS Infomation

cds chromosome:12X:12:758349:766984:-1 gene:VIT_12s0028g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTTACACAGCAATTGATACATTCTATCTAACCGATGAGCAGCTAAAGAACTCACCT
TCCAGGAAAGATGGTATAGATGAAGCAACTGAAATGACCCTTAGAATTTATGGTTGTGAT
CTCATCCAAGAAAGCGGCATTTTACTGAGACTACCTCAAGTAGTAATGGCCACTGGCCAG
GTTTTGTTCCATCGCTTCTACTGCAAGAAGTCATTTGCCCGTTTCAATGTGAAGAGAGTT
GCTGCTAGTTGTGTTTGGCTAGCATCAAAACTGGAAGAAAGCCTTAGAAAAGCAAGGCAA
GTCCTCATTGTTTTCCACAGAATGGAATGCAGGAGGGAGAACTTACCCGTTGTGCACTTG
GACCCATTTTCTAAGAAATATGCTGAATTGAAGACTCATTTGAGCAGAACTGAAAGACAC
ATCTTGAAAGAGATGGGTTTTATTTGTCATGTGGAGCATCCTCATAAATTCATATCAAAC
TACCTTGCCACCCTCAAAACTCCTCCAGAATTGAGGCAAGAAGCTTGGAATCTTGCAAAT
GATAGCTTGCGCACAACCTTATGTGTTCGATTTAAGAGTGAGGTGGTGGCTTGTGGGGTT
GTATATGCAGCCGCTCGTAGGTTTCAAGTACCCCTTCCTGAGAATGAACCATGGTGGGAG
GTATTTGATGCAGAGAAGTCTGCAATTGATGAAGTTTGCAGAGTCCTGGCTCATCTGTAC
AACCTTCCAAAGGCACAGTATATCCCAGTGTGTAAGGATGGAGATTCTTTCACATCTTCT
AACAAGTCACAAGATTCACAAACTCAGCCAGTTTCAAAGGAAGTTTTGCAGAGTGGCCCA
TCAGCTAATAATGATACTGTCACTCCCAAAGCAGCTTCCGCGTTGATTAATCCAGAATCA
GGCGGGTCCAAGAATTCAATGGTAAAACAAGCCCTTGACATGTTGAAGGAATCCAAAAAG
GGTGATGATGATCCCAAGAGCATGGCTGTGGAGGGAGAGGGTAGAGAAGAGCCCATACCA
TCCAAGTCTGAGCATAGAACAGAGGCAAGTGGGGAAAGGAACAAGGAGAGAGACAAGGAA
AGGGAAAGGGAAAGGGAGAGAGACAGGGACAGGGACAGGGAAAGGGAAAGAGCAAAAGCA
CGGGACCGTGATAGAGGAAGGGATTCTGATAGGGAACGGGAGCGAGATGAGATTGACAAG
GACCGAGAGAAGGTGAAGGATAGAAAACATCGGTCTAAGGATAAAGGAAAAGATTCAGAC
ATCACTCATCTCGAGATCGAGACTACCACAGCTCCTCTTATTCTTCAAGGGAGAAGGATC
GCCATAGACATCATCCTTACTCTTGAACTAGTAGCCAAGGACTGCATGCATGAGTATTTC
AGGGATTCTTTGCCCCTTCACGCTACTGGGGTGGAAGAAGATCGTTCTAGCCTTGAGAAC
AATGAGTCCTCAAGGGGTCCTTATGATATTTTGACAATCAATTGTAAGTTACAGCAGTCC
TCTCTTGAACTCAGCACACACTCCCACTATCTTCCTCCAGAAAAGAAACTACCTAAGACC
CTTCAATGTCATTCAATTCATCACAAGACAAAGCGAAACATACTAAGAGCGAAAAAGAAC
GAGAAATACGAAGAGTGA

Peptide Sequence

PEP ID

VIT_12s0028g00110.t01
PEP Infomation

pep chromosome:12X:12:758349:766984:-1 gene:VIT_12s0028g00110 transcript:VIT_12s0028g00110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIYTAIDTFYLTDEQLKNSPSRKDGIDEATEMTLRIYGCDLIQESGILLRLPQVVMATGQ
VLFHRFYCKKSFARFNVKRVAASCVWLASKLEESLRKARQVLIVFHRMECRRENLPVVHL
DPFSKKYAELKTHLSRTERHILKEMGFICHVEHPHKFISNYLATLKTPPELRQEAWNLAN
DSLRTTLCVRFKSEVVACGVVYAAARRFQVPLPENEPWWEVFDAEKSAIDEVCRVLAHLY
NLPKAQYIPVCKDGDSFTSSNKSQDSQTQPVSKEVLQSGPSANNDTVTPKAASALINPES
GGSKNSMVKQALDMLKESKKGDDDPKSMAVEGEGREEPIPSKSEHRTEASGERNKERDKE
RERERERDRDRDRERERAKARDRDRGRDSDRERERDEIDKDREKVKDRKHRSKDKGKDSD
ITHLEIETTTAPLILQGRRIAIDIILTLELVAKDCMHEYFRDSLPLHATGVEEDRSSLEN
NESSRGPYDILTINCKLQQSSLELSTHSHYLPPEKKLPKTLQCHSIHHKTKRNILRAKKN
EKYEE

Transcript Sequence

Transcript ID

VIT_12s0028g00110.t01
Transcript Infomation

cdna chromosome:12X:12:758349:766984:-1 gene:VIT_12s0028g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTAGCCACCATGATTTACACAGCAATTGATACATTCTATCTAACCGATGAGCAGCTAAA
GAACTCACCTTCCAGGAAAGATGGTATAGATGAAGCAACTGAAATGACCCTTAGAATTTA
TGGTTGTGATCTCATCCAAGAAAGCGGCATTTTACTGAGACTACCTCAAGTAGTAATGGC
CACTGGCCAGGTTTTGTTCCATCGCTTCTACTGCAAGAAGTCATTTGCCCGTTTCAATGT
GAAGAGAGTTGCTGCTAGTTGTGTTTGGCTAGCATCAAAACTGGAAGAAAGCCTTAGAAA
AGCAAGGCAAGTCCTCATTGTTTTCCACAGAATGGAATGCAGGAGGGAGAACTTACCCGT
TGTGCACTTGGACCCATTTTCTAAGAAATATGCTGAATTGAAGACTCATTTGAGCAGAAC
TGAAAGACACATCTTGAAAGAGATGGGTTTTATTTGTCATGTGGAGCATCCTCATAAATT
CATATCAAACTACCTTGCCACCCTCAAAACTCCTCCAGAATTGAGGCAAGAAGCTTGGAA
TCTTGCAAATGATAGCTTGCGCACAACCTTATGTGTTCGATTTAAGAGTGAGGTGGTGGC
TTGTGGGGTTGTATATGCAGCCGCTCGTAGGTTTCAAGTACCCCTTCCTGAGAATGAACC
ATGGTGGGAGGTATTTGATGCAGAGAAGTCTGCAATTGATGAAGTTTGCAGAGTCCTGGC
TCATCTGTACAACCTTCCAAAGGCACAGTATATCCCAGTGTGTAAGGATGGAGATTCTTT
CACATCTTCTAACAAGTCACAAGATTCACAAACTCAGCCAGTTTCAAAGGAAGTTTTGCA
GAGTGGCCCATCAGCTAATAATGATACTGTCACTCCCAAAGCAGCTTCCGCGTTGATTAA
TCCAGAATCAGGCGGGTCCAAGAATTCAATGGTAAAACAAGCCCTTGACATGTTGAAGGA
ATCCAAAAAGGGTGATGATGATCCCAAGAGCATGGCTGTGGAGGGAGAGGGTAGAGAAGA
GCCCATACCATCCAAGTCTGAGCATAGAACAGAGGCAAGTGGGGAAAGGAACAAGGAGAG
AGACAAGGAAAGGGAAAGGGAAAGGGAGAGAGACAGGGACAGGGACAGGGAAAGGGAAAG
AGCAAAAGCACGGGACCGTGATAGAGGAAGGGATTCTGATAGGGAACGGGAGCGAGATGA
GATTGACAAGGACCGAGAGAAGGTGAAGGATAGAAAACATCGGTCTAAGGATAAAGGAAA
AGATTCAGACATCACTCATCTCGAGATCGAGACTACCACAGCTCCTCTTATTCTTCAAGG
GAGAAGGATCGCCATAGACATCATCCTTACTCTTGAACTAGTAGCCAAGGACTGCATGCA
TGAGTATTTCAGGGATTCTTTGCCCCTTCACGCTACTGGGGTGGAAGAAGATCGTTCTAG
CCTTGAGAACAATGAGTCCTCAAGGGGTCCTTATGATATTTTGACAATCAATTGTAAGTT
ACAGCAGTCCTCTCTTGAACTCAGCACACACTCCCACTATCTTCCTCCAGAAAAGAAACT
ACCTAAGACCCTTCAATGTCATTCAATTCATCACAAGACAAAGCGAAACATACTAAGAGC
GAAAAAGAACGAGAAATACGAAGAGTGA