Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_12s0028g00060.t01
CDS Infomation

cds chromosome:12X:12:733825:735398:1 gene:VIT_12s0028g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGACCTCCAAAAGATCCATGCCCATCTCCTCAAAACTGGCCTGGCCAAACACCCT
CTTGCTGTCAGCCCTGTCCTGGCCTTCTGCGCCACCTCCCCGGGCGGTGACATCAACTAT
GCTTACTTGGTTTTCACTCAAATCCATAGCCCAAACCTCTTCTCTTGGAACACTATCATT
AGGGGCTTCTCTCAAAGCTCAACCCCGCACCATGCCATATCACTCTTCATTGACATGTTA
ATCGTTTCATCTGTGCAGCCACATAGGCTCACATATCCTTCTGTTTTTAAGGCTTATGCA
CAACTTGGTCTTGCTCATTATGGAGCTCAGCTCCATGGGAGGGTGATAAAACTAGGCCTC
CAATTCGATCCTTTTATTAGGAACACAATCATCTATATGTATGCGAATTGCGGGTTCTTG
AGTGAGATGTGGAAAGCTTTTTATGAAAGGATGGATTTCGACATTGTTGCATGGAATTCA
ATGATTATGGGGCTTGCTAAATGTGGGGAAGTTGATGAGTCGAGAAAGTTGTTTGATGAA
ATGCCGCTGAGGAATACAGTTTCTTGGAACTCTATGATTAGTGGGTATGTTAGGAATGGA
AGGTTGAGGGAGGCATTGGACCTTTTTGGCCAAATGCAAGAAGAGAGGATTAAGCCGAGC
GAGTTTACAATGGTGAGTTTGTTGAATGCTTCAGCTCGATTAGGAGCACTTAAGCAAGGG
GAATGGATTCATGATTATATAAGGAAGAACAATTTTGAACTGAATGTGATTGTTACAGCA
TCCATTATAGACATGTACTGCAAATGTGGAAGCATTGGAGAGGCTTTTCAAGTGTTTGAA
ATGGCTCCCCTCAAAGGATTGTCAAGTTGGAACACCATGATCTTGGGCCTAGCCATGAAT
GGTTGTGAGAATGAAGCAATTCAATTATTCTCAAGGCTTGAATGCTCGAATCTGAGGCCA
GATGATGTGACTTTTGTTGGTGTTTTAACAGCTTGTAACTACTCAGGTTTGGTAGATAAA
GCAAAAGAATACTTCTCATTAATGAGCAAGACCTATAAGATCGAACCATCTATTAAGCAC
TACAGTTGCATGGTTGACACACTTGGCCGAGCTGGACTACTTGAAGAAGCAGAAGAGCTA
ATAAGAAATATGCCAGTAAACCCAGATGCTATTATCTGGAGTTCCTTACTCTCAGCATGT
AGGAAGCATGGAAATGTTGAGTTGGCCAAAAGGGCAGCAAAGCATATAGTTGATTTGGAT
GGAAATGACAGCTGTGGTTATGTACTTCTTTCGAATATTTATGCTGCCTCTGATCAGTTT
GAGGAAGCGATGGAGCAAAGGCTTTCCATGAAGGAGAAACAGATAGAGAAAGAACCAGGA
TGTAGTTTGATTGAAGTGAATGGGGAAATTCATGAGTTTGTAGCTGGTGGAAGGCTCCAT
CCTCAAGCACAAGAGGTCTATTCTTTATTGAATGAGTTGGGGATGATGTTTTGA

Peptide Sequence

PEP ID

VIT_12s0028g00060.t01
PEP Infomation

pep chromosome:12X:12:733825:735398:1 gene:VIT_12s0028g00060 transcript:VIT_12s0028g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTII
RGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGL
QFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLFDE
MPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQG
EWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMN
GCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKH
YSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIVDLD
GNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHEFVAGGRLH
PQAQEVYSLLNELGMMF

Transcript Sequence

Transcript ID

VIT_12s0028g00060.t01
Transcript Infomation

cdna chromosome:12X:12:733825:735398:1 gene:VIT_12s0028g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCATCACCATCAACCTCCATATCCAAATTCATCTCAGACCATCCACACCTCTCCATAC
TGGAAAAACACTGCACCACCATGAAAGACCTCCAAAAGATCCATGCCCATCTCCTCAAAA
CTGGCCTGGCCAAACACCCTCTTGCTGTCAGCCCTGTCCTGGCCTTCTGCGCCACCTCCC
CGGGCGGTGACATCAACTATGCTTACTTGGTTTTCACTCAAATCCATAGCCCAAACCTCT
TCTCTTGGAACACTATCATTAGGGGCTTCTCTCAAAGCTCAACCCCGCACCATGCCATAT
CACTCTTCATTGACATGTTAATCGTTTCATCTGTGCAGCCACATAGGCTCACATATCCTT
CTGTTTTTAAGGCTTATGCACAACTTGGTCTTGCTCATTATGGAGCTCAGCTCCATGGGA
GGGTGATAAAACTAGGCCTCCAATTCGATCCTTTTATTAGGAACACAATCATCTATATGT
ATGCGAATTGCGGGTTCTTGAGTGAGATGTGGAAAGCTTTTTATGAAAGGATGGATTTCG
ACATTGTTGCATGGAATTCAATGATTATGGGGCTTGCTAAATGTGGGGAAGTTGATGAGT
CGAGAAAGTTGTTTGATGAAATGCCGCTGAGGAATACAGTTTCTTGGAACTCTATGATTA
GTGGGTATGTTAGGAATGGAAGGTTGAGGGAGGCATTGGACCTTTTTGGCCAAATGCAAG
AAGAGAGGATTAAGCCGAGCGAGTTTACAATGGTGAGTTTGTTGAATGCTTCAGCTCGAT
TAGGAGCACTTAAGCAAGGGGAATGGATTCATGATTATATAAGGAAGAACAATTTTGAAC
TGAATGTGATTGTTACAGCATCCATTATAGACATGTACTGCAAATGTGGAAGCATTGGAG
AGGCTTTTCAAGTGTTTGAAATGGCTCCCCTCAAAGGATTGTCAAGTTGGAACACCATGA
TCTTGGGCCTAGCCATGAATGGTTGTGAGAATGAAGCAATTCAATTATTCTCAAGGCTTG
AATGCTCGAATCTGAGGCCAGATGATGTGACTTTTGTTGGTGTTTTAACAGCTTGTAACT
ACTCAGGTTTGGTAGATAAAGCAAAAGAATACTTCTCATTAATGAGCAAGACCTATAAGA
TCGAACCATCTATTAAGCACTACAGTTGCATGGTTGACACACTTGGCCGAGCTGGACTAC
TTGAAGAAGCAGAAGAGCTAATAAGAAATATGCCAGTAAACCCAGATGCTATTATCTGGA
GTTCCTTACTCTCAGCATGTAGGAAGCATGGAAATGTTGAGTTGGCCAAAAGGGCAGCAA
AGCATATAGTTGATTTGGATGGAAATGACAGCTGTGGTTATGTACTTCTTTCGAATATTT
ATGCTGCCTCTGATCAGTTTGAGGAAGCGATGGAGCAAAGGCTTTCCATGAAGGAGAAAC
AGATAGAGAAAGAACCAGGATGTAGTTTGATTGAAGTGAATGGGGAAATTCATGAGTTTG
TAGCTGGTGGAAGGCTCCATCCTCAAGCACAAGAGGTCTATTCTTTATTGAATGAGTTGG
GGATGATGTTTTGA