Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0206g00140.t01
CDS Infomation

cds chromosome:12X:11:7470447:7473588:1 gene:VIT_11s0206g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCAGGTGTTTAGTTCTTTTCTCCTTGTTGATCCTCTCAACTTCAGCCCAGAAAACT
TCCTCACAAACATGGCAGACTTTAAATGGTGATGAGCCTGTTGTTATAGCCCGTGGCGGA
TTCTCGGGACTTTTCCCTGAATCTAGCCAATTTGCACATCAAATTGCGCTTTCCACCAGC
CTGTCCAATGTAATTTTGTACTGCAACCTGCAACTGACAAAGGATAGCGTTGGCATATGC
CAGACAGATATAAGACTTGATAATTCAACAAATATAGCAGCTGTCTTTCCAAAATCCCAA
AAAACCTACACAATTAATGGAGAAAATGTTCAGGGTTGGTTCGCTTTGGATTATACATCT
GATCAGCTCTTTAACAATGTAACATTGACTCAAAGCATATACTCCCGGCCAAGTTTGTTT
GATGGCACGCTGCCATTATCTACTGTTGATGATGCAATTGGGATCAAACCCCCTGGCTTT
TGGTTGAATGTTCAGTATGATGCATTCTATGCTGCAAACAAACTCAGTGTATCATCATAC
ATTCAAAAGACTACAAGATTTATGGGCATAAGTTACATTTCATCTCCTGAGATAGGTTTC
TTGAAGAACATGAATAAAATCATAAACAAGGCCAAGACCAAACTCATCTTCCGGTTCCTA
GATGCAGACGCAGTCGAACCCACAACCAAACAACCATATAGTTCAATATTAAAGGATCTT
TCCTCAATCAAGTCAATTGCATCGGGAATTCTTGTCCCTAAAGAATATATATGGCCTCTT
AGTAAGGACCAGTATCTGCTAACTCCCTCTAGTGTTGTAGCCGATGCTCATAAACAAGGC
CTAGAAGTATATGCTTCTGGATTCGCAAATGATATGCCTGGAAGTTACAACTATAGTTAT
GACCCAACAGCTGAGTACCTGCAGTTTGTCGATAATTCAGATTTTTCTGTTGATGGAGTG
CTCACAGATTTCCCTCCCACAGCATCAGAAGCCATTGCATGCTTAGCACACAACAAGAAT
GCTACCAGGCCTAGCAAAGGGAAAATTTTGGTCATATCTCACAATGGAGCAAGTGGGGTT
TACCCTGGCAGTACTGATCTTGCATACCAGCAAGCAGTAGATGATGGGGCTGATATAATA
GATTGCTCAGTCCAAATGTCAAAAGATGGAGTTGCCTTCTGCTTAAATTCAGCTGACCTC
TTGGGGAGTTCTAATGCCATGACTTCTTTCATGTCTCGATCTACCATGGTCTCTGAAATT
CAACCGAAGAGTGGAATTTTTTCGTTTGATCTCACATGGAGCGAGATTCAAACACTGACG
CCTCAACTAACAAGTCCACTCCCAAATAGTGGCTTGGCAAGAAACCCAGCAAACAAGAAC
CAGGGGAAATTCATAACTCTCTCTGATTTCCTGGACTTTGCTAAGGCCAAGGCAGTTTCT
GGAATTTTGATCGACATAGAGAATGCTGCCTACCTAGCATCGAAGAAGGGTCTTAGCATA
ATAGATGCTGTGACAGCTGCCTTGAGCAATGCCACCTTTGACAAACAAGCAACCCAACAA
GTCATGATACAATCCGACGACACTTCAGTGCTGTCCAAGTTCAAGAATGTCCCAGGTTAC
AAGCGAGTTCTATCCATCAAGGAAATTATAGGTGATGTACCCAAGCAGACAGTGGAGGAG
ATAAAAAAATTTGCTGATGCAGTCAACCTCCCAAGATCGTCCATTGTCACAACTAATGGT
GGCTTCACTACAACTTTTACCACTGTTGTTGATGAACTCCATGCTGCAAATATCTCAGCA
TATGTCTCAGTTCTCAGGAATGAATACGTCGCCATCGCATTCGATTTCTTCTCAGACCCG
GTTGTGGAGCTTGCTACTTACGTTGGTCGCCTTGGAATTGATGGGGTTGTGACTGACTAT
CCAAAAACTGCAGACGCATATCTCAGAAGCCCCTGCTCGGATTTGAATGCGAAAGTGGCA
TATTCCATATTGCCAGCAGAGGCGGGTGCATTACTTGGGTTGGCAGAGCCGGAAGTGTTG
CCGCCAGCAGAAGCCCCGGGGCCACCGCTCACAGTCGACGACGTTGTAGACCCACCACTG
CCACAAGTATCATCATCAAATGGCTCAACAGCCGATCCGGCTGCTGGACCTGTTAAAGCC
CCTCCACGTTCAAGTGGTCGGGCAAATGCTGCCAATATGGGTCTCCATCTATTGGGAATT
CTGCTGATTAGCTTACTTTCTGCGGGATATTAA

Peptide Sequence

PEP ID

VIT_11s0206g00140.t01
PEP Infomation

pep chromosome:12X:11:7470447:7473588:1 gene:VIT_11s0206g00140 transcript:VIT_11s0206g00140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIRCLVLFSLLILSTSAQKTSSQTWQTLNGDEPVVIARGGFSGLFPESSQFAHQIALSTS
LSNVILYCNLQLTKDSVGICQTDIRLDNSTNIAAVFPKSQKTYTINGENVQGWFALDYTS
DQLFNNVTLTQSIYSRPSLFDGTLPLSTVDDAIGIKPPGFWLNVQYDAFYAANKLSVSSY
IQKTTRFMGISYISSPEIGFLKNMNKIINKAKTKLIFRFLDADAVEPTTKQPYSSILKDL
SSIKSIASGILVPKEYIWPLSKDQYLLTPSSVVADAHKQGLEVYASGFANDMPGSYNYSY
DPTAEYLQFVDNSDFSVDGVLTDFPPTASEAIACLAHNKNATRPSKGKILVISHNGASGV
YPGSTDLAYQQAVDDGADIIDCSVQMSKDGVAFCLNSADLLGSSNAMTSFMSRSTMVSEI
QPKSGIFSFDLTWSEIQTLTPQLTSPLPNSGLARNPANKNQGKFITLSDFLDFAKAKAVS
GILIDIENAAYLASKKGLSIIDAVTAALSNATFDKQATQQVMIQSDDTSVLSKFKNVPGY
KRVLSIKEIIGDVPKQTVEEIKKFADAVNLPRSSIVTTNGGFTTTFTTVVDELHAANISA
YVSVLRNEYVAIAFDFFSDPVVELATYVGRLGIDGVVTDYPKTADAYLRSPCSDLNAKVA
YSILPAEAGALLGLAEPEVLPPAEAPGPPLTVDDVVDPPLPQVSSSNGSTADPAAGPVKA
PPRSSGRANAANMGLHLLGILLISLLSAGY

Transcript Sequence

Transcript ID

VIT_11s0206g00140.t01
Transcript Infomation

cdna chromosome:12X:11:7470447:7473588:1 gene:VIT_11s0206g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCAGGTGTTTAGTTCTTTTCTCCTTGTTGATCCTCTCAACTTCAGCCCAGAAAACT
TCCTCACAAACATGGCAGACTTTAAATGGTGATGAGCCTGTTGTTATAGCCCGTGGCGGA
TTCTCGGGACTTTTCCCTGAATCTAGCCAATTTGCACATCAAATTGCGCTTTCCACCAGC
CTGTCCAATGTAATTTTGTACTGCAACCTGCAACTGACAAAGGATAGCGTTGGCATATGC
CAGACAGATATAAGACTTGATAATTCAACAAATATAGCAGCTGTCTTTCCAAAATCCCAA
AAAACCTACACAATTAATGGAGAAAATGTTCAGGGTTGGTTCGCTTTGGATTATACATCT
GATCAGCTCTTTAACAATGTAACATTGACTCAAAGCATATACTCCCGGCCAAGTTTGTTT
GATGGCACGCTGCCATTATCTACTGTTGATGATGCAATTGGGATCAAACCCCCTGGCTTT
TGGTTGAATGTTCAGTATGATGCATTCTATGCTGCAAACAAACTCAGTGTATCATCATAC
ATTCAAAAGACTACAAGATTTATGGGCATAAGTTACATTTCATCTCCTGAGATAGGTTTC
TTGAAGAACATGAATAAAATCATAAACAAGGCCAAGACCAAACTCATCTTCCGGTTCCTA
GATGCAGACGCAGTCGAACCCACAACCAAACAACCATATAGTTCAATATTAAAGGATCTT
TCCTCAATCAAGTCAATTGCATCGGGAATTCTTGTCCCTAAAGAATATATATGGCCTCTT
AGTAAGGACCAGTATCTGCTAACTCCCTCTAGTGTTGTAGCCGATGCTCATAAACAAGGC
CTAGAAGTATATGCTTCTGGATTCGCAAATGATATGCCTGGAAGTTACAACTATAGTTAT
GACCCAACAGCTGAGTACCTGCAGTTTGTCGATAATTCAGATTTTTCTGTTGATGGAGTG
CTCACAGATTTCCCTCCCACAGCATCAGAAGCCATTGCATGCTTAGCACACAACAAGAAT
GCTACCAGGCCTAGCAAAGGGAAAATTTTGGTCATATCTCACAATGGAGCAAGTGGGGTT
TACCCTGGCAGTACTGATCTTGCATACCAGCAAGCAGTAGATGATGGGGCTGATATAATA
GATTGCTCAGTCCAAATGTCAAAAGATGGAGTTGCCTTCTGCTTAAATTCAGCTGACCTC
TTGGGGAGTTCTAATGCCATGACTTCTTTCATGTCTCGATCTACCATGGTCTCTGAAATT
CAACCGAAGAGTGGAATTTTTTCGTTTGATCTCACATGGAGCGAGATTCAAACACTGACG
CCTCAACTAACAAGTCCACTCCCAAATAGTGGCTTGGCAAGAAACCCAGCAAACAAGAAC
CAGGGGAAATTCATAACTCTCTCTGATTTCCTGGACTTTGCTAAGGCCAAGGCAGTTTCT
GGAATTTTGATCGACATAGAGAATGCTGCCTACCTAGCATCGAAGAAGGGTCTTAGCATA
ATAGATGCTGTGACAGCTGCCTTGAGCAATGCCACCTTTGACAAACAAGCAACCCAACAA
GTCATGATACAATCCGACGACACTTCAGTGCTGTCCAAGTTCAAGAATGTCCCAGGTTAC
AAGCGAGTTCTATCCATCAAGGAAATTATAGGTGATGTACCCAAGCAGACAGTGGAGGAG
ATAAAAAAATTTGCTGATGCAGTCAACCTCCCAAGATCGTCCATTGTCACAACTAATGGT
GGCTTCACTACAACTTTTACCACTGTTGTTGATGAACTCCATGCTGCAAATATCTCAGCA
TATGTCTCAGTTCTCAGGAATGAATACGTCGCCATCGCATTCGATTTCTTCTCAGACCCG
GTTGTGGAGCTTGCTACTTACGTTGGTCGCCTTGGAATTGATGGGGTTGTGACTGACTAT
CCAAAAACTGCAGACGCATATCTCAGAAGCCCCTGCTCGGATTTGAATGCGAAAGTGGCA
TATTCCATATTGCCAGCAGAGGCGGGTGCATTACTTGGGTTGGCAGAGCCGGAAGTGTTG
CCGCCAGCAGAAGCCCCGGGGCCACCGCTCACAGTCGACGACGTTGTAGACCCACCACTG
CCACAAGTATCATCATCAAATGGCTCAACAGCCGATCCGGCTGCTGGACCTGTTAAAGCC
CCTCCACGTTCAAGTGGTCGGGCAAATGCTGCCAATATGGGTCTCCATCTATTGGGAATT
CTGCTGATTAGCTTACTTTCTGCGGGATATTAAATTTTATTGACCTTCCCATGGACTTTT
ATCTACATTCTTTTCCTATTGAAGTGGAAAATGTAAATTTTATTTTAGAA