Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00820.t01
CDS Infomation

cds chromosome:12X:11:6653660:6672983:1 gene:VIT_11s0118g00820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGGCGGAGCCAAGAAAAAGCATTTCAACAAGTCCAAGTCCAGGTCCAAAGCACCG
TCTAACTTTTCTGCTGGATCGGTGTTCGTCTCTGGGGGTTCCTTGGTTGATTGGAGCCCC
AATTTGCATTCTACCCCTAATTCTATCCCAGGAAGAAAAAACCCCAATGGAAATGCCCGA
TCGGGGAATTCGGGTGCGAGCGGTGCTTCTGGGTCCAGATATGGGCCGGGGAAATACACT
GGAAATGCTTACGGATACACCTATCCAGCTGCTACTCCCCAGGATGGTATGCATCCAGAA
TCATATGTTGGGGGCAGTAATGGGGATAATTATTTGAATGCATCACAGCCAATTGTTTTA
GTTGATTCCATGGAGACTCAGATTGTTGCTTTTGAAGACAAAACACCATGCTCAAAAACA
TTTTGTGAGAATTTCACTTATGATTATGGTTCAGATTTGGTATTAGGTGATAGCTCATGC
AGAGGATTGGGGTTCTTTGATGAATCTGAGACGGCATCAGGTGGCAATGGAACATCTAAG
AAGAAAATTGAAGAGGAAGAAGGCTCATGTTTCAAATTATCATCACCTGAGAAGGATGCA
GATGCTGATGAAAACAACATTTGCAAGTTGGGTGTTGAGATGGCTGAAGAAGTGCTTAAC
ACACCCAGTAGCATTGGAGCATCCACAAAGAAAATGGAAGAAGGGGGGTCATGTTTCAAA
TCATCATCACTCGAGAAGGACATGGATGCTGAGATGGCTGAAGATGTATTCAGTGGGGCA
TTTTCTTCAGAGAAAAATTCTGGGTTTTTGTCAATTGGAGGCATGAAATTATACACTCAG
GATATTTCAGATCAGGAGAGTGATGAGGAAATTGATGGGGAGTCGCTTGACGAGGAAAGC
TCTGAGTCTCTTGAGCCAGAAGATTCAGTTAGTTCATCGGACACATCAGATAGTGATTCA
GATATTGATGAAGAGGTTGCAAAGGATTACTTGGAAGGAATTGGTGGGAGTGACAAAGTT
GTAGATGTGAAGTGGTTGGTAGAACAGGATTTGGATGTCTCAGATGACGATGGTTCTTCT
AGCAATGGCTTTGATGATACTATAGAGAAGTTGGGTGGGATTGCTCTCCAGGATGCATCT
AGGGACTATGGTATGAAGAAGCCACGATCAAGAAAGAAAGCCACTCCTAAAACAGGAGTT
GCTGCAGGTGATTGGTCAATGGCTTTGGATGATCTTATGTATTTAAAGGATCCCAGAAAA
ATTTCTGCAAAAAAGAAGCATGTTGCTAAGCTTCCACAGTCTTGGCCTTCCGAGGCTCAA
AAGAGCAAAAATTTTGGAAACTTTCCAGGTGCAAAAAAGAAACATCGTAAAGAAAAGATT
GCTTTGAAGCATCAGGAGAGAATGGTGCGCCGTGGTGTTGACCTTAAGGAAATAAATTTG
AAATTAAAGCAGATTGTTTTGGATGAAGTAGATATATTTTCATTTCAAGCTATGCTTCCC
AAGGATTGTTTGCAGGTACAACGACTAGCATCAATTTATGGTTTGTGGAGTAGCAGCAAA
GGTTCCCGCAAGAAGAGATTGGGAGTTAGAGTTGGTGGGAGGTTTAAAGGGGTGCATTCA
TTGAGTAGGAGTGCTAAGGAAGTGGAGAGGATGGTTTGGATAAGAATGAGGGGTTGGTGA

Peptide Sequence

PEP ID

VIT_11s0118g00820.t01
PEP Infomation

pep chromosome:12X:11:6653660:6672983:1 gene:VIT_11s0118g00820 transcript:VIT_11s0118g00820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGGAKKKHFNKSKSRSKAPSNFSAGSVFVSGGSLVDWSPNLHSTPNSIPGRKNPNGNAR
SGNSGASGASGSRYGPGKYTGNAYGYTYPAATPQDGMHPESYVGGSNGDNYLNASQPIVL
VDSMETQIVAFEDKTPCSKTFCENFTYDYGSDLVLGDSSCRGLGFFDESETASGGNGTSK
KKIEEEEGSCFKLSSPEKDADADENNICKLGVEMAEEVLNTPSSIGASTKKMEEGGSCFK
SSSLEKDMDAEMAEDVFSGAFSSEKNSGFLSIGGMKLYTQDISDQESDEEIDGESLDEES
SESLEPEDSVSSSDTSDSDSDIDEEVAKDYLEGIGGSDKVVDVKWLVEQDLDVSDDDGSS
SNGFDDTIEKLGGIALQDASRDYGMKKPRSRKKATPKTGVAAGDWSMALDDLMYLKDPRK
ISAKKKHVAKLPQSWPSEAQKSKNFGNFPGAKKKHRKEKIALKHQERMVRRGVDLKEINL
KLKQIVLDEVDIFSFQAMLPKDCLQVQRLASIYGLWSSSKGSRKKRLGVRVGGRFKGVHS
LSRSAKEVERMVWIRMRGW

Transcript Sequence

Transcript ID

VIT_11s0118g00820.t01
Transcript Infomation

cdna chromosome:12X:11:6653660:6672983:1 gene:VIT_11s0118g00820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTGGACTCAAAGATCTCACAGACACACCCAATCCGCCATGGCCGGCGGAGCCAAGAAA
AAGCATTTCAACAAGTCCAAGTCCAGGTCCAAAGCACCGTCTAACTTTTCTGCTGGATCG
GTGTTCGTCTCTGGGGGTTCCTTGGTTGATTGGAGCCCCAATTTGCATTCTACCCCTAAT
TCTATCCCAGGAAGAAAAAACCCCAATGGAAATGCCCGATCGGGGAATTCGGGTGCGAGC
GGTGCTTCTGGGTCCAGATATGGGCCGGGGAAATACACTGGAAATGCTTACGGATACACC
TATCCAGCTGCTACTCCCCAGGATGGTATGCATCCAGAATCATATGTTGGGGGCAGTAAT
GGGGATAATTATTTGAATGCATCACAGCCAATTGTTTTAGTTGATTCCATGGAGACTCAG
ATTGTTGCTTTTGAAGACAAAACACCATGCTCAAAAACATTTTGTGAGAATTTCACTTAT
GATTATGGTTCAGATTTGGTATTAGGTGATAGCTCATGCAGAGGATTGGGGTTCTTTGAT
GAATCTGAGACGGCATCAGGTGGCAATGGAACATCTAAGAAGAAAATTGAAGAGGAAGAA
GGCTCATGTTTCAAATTATCATCACCTGAGAAGGATGCAGATGCTGATGAAAACAACATT
TGCAAGTTGGGTGTTGAGATGGCTGAAGAAGTGCTTAACACACCCAGTAGCATTGGAGCA
TCCACAAAGAAAATGGAAGAAGGGGGGTCATGTTTCAAATCATCATCACTCGAGAAGGAC
ATGGATGCTGAGATGGCTGAAGATGTATTCAGTGGGGCATTTTCTTCAGAGAAAAATTCT
GGGTTTTTGTCAATTGGAGGCATGAAATTATACACTCAGGATATTTCAGATCAGGAGAGT
GATGAGGAAATTGATGGGGAGTCGCTTGACGAGGAAAGCTCTGAGTCTCTTGAGCCAGAA
GATTCAGTTAGTTCATCGGACACATCAGATAGTGATTCAGATATTGATGAAGAGGTTGCA
AAGGATTACTTGGAAGGAATTGGTGGGAGTGACAAAGTTGTAGATGTGAAGTGGTTGGTA
GAACAGGATTTGGATGTCTCAGATGACGATGGTTCTTCTAGCAATGGCTTTGATGATACT
ATAGAGAAGTTGGGTGGGATTGCTCTCCAGGATGCATCTAGGGACTATGGTATGAAGAAG
CCACGATCAAGAAAGAAAGCCACTCCTAAAACAGGAGTTGCTGCAGGTGATTGGTCAATG
GCTTTGGATGATCTTATGTATTTAAAGGATCCCAGAAAAATTTCTGCAAAAAAGAAGCAT
GTTGCTAAGCTTCCACAGTCTTGGCCTTCCGAGGCTCAAAAGAGCAAAAATTTTGGAAAC
TTTCCAGGTGCAAAAAAGAAACATCGTAAAGAAAAGATTGCTTTGAAGCATCAGGAGAGA
ATGGTGCGCCGTGGTGTTGACCTTAAGGAAATAAATTTGAAATTAAAGCAGATTGTTTTG
GATGAAGTAGATATATTTTCATTTCAAGCTATGCTTCCCAAGGATTGTTTGCAGGTACAA
CGACTAGCATCAATTTATGGTTTGTGGAGTAGCAGCAAAGGTTCCCGCAAGAAGAGATTG
GGAGTTAGAGTTGGTGGGAGGTTTAAAGGGGTGCATTCATTGAGTAGGAGTGCTAAGGAA
GTGGAGAGGATGGTTTGGATAAGAATGAGGGGTTGGTGA