Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00700.t01
CDS Infomation

cds chromosome:12X:11:6467916:6472998:1 gene:VIT_11s0118g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGTGTCAAGGACTCTGAACAGGTCTCTGAAGAAATGGAGAATTCTAGTCTAAGTGAT
CATGATGCCACCAAGTTGGGTAATTCATTTCCGCTGCAAAGCATTTCAGAAGATAAAGTG
GCTTCAGACAAAGAACAGAACCTGGTATCCATCTTTGTCCCTGCTCTTCGATCAGGGGAG
TGGTCTGATATTGGGGGTCGGCCCTATATGGAGGACACTCACATATGCATCAGTGACCTG
GCTAAGAAGTTCAATCATAATTTGCTTGATAAGGAAGCTATATCCTTCTATGGTGTATTT
GATGGTCATGGAGGAAATGCTGCAGCGCAGTTTGTCCGTGACCACTTGCCAAGGGTCATT
GTCGAGGACGCTGATTTCCCCTTAGCACTGGAGAAGGTAGTTATGAGGTCATTTATAGAG
ACAGATGCTGAATTCGCAAAGACATGCTCTCTTGAGTCTTCCCTGTCTTCTGGCACAACT
GCACTTACAGCGATGATATTTGGGAGGTCTTTGCTTGTGGCAAATGCTGGGGATTGCCGG
GCAGTGCTGTCACAGCTCGGAGTGGCTATAGAAATGTCGAAAGATCACAGGCCATGCTGC
ACAAGAGAAAGGAGCAGGATTGAGTCCCTGGGTGGATACATTGATGATGGGTATCTAAAT
GGTCAGATATCCGTCACCCGTGCGCTTGGTGATTGGCACCTTGAAGGACTGAAAGATATT
GGTGAAAGGGGTGGACCTTTGAGTGCTGAACCAGAACTTAAACTAATGACACTAACCAAA
GAACATGAGTTCTTAATCATAGGCAGTGACGGAATCTGGGAGGTGTTTAGGAGCCAAAAT
GCAGTAGATTTTGTCCGGAGGAGACTCCAAGAGCACAACGATGTGAAGCTATGCTGCAAG
GAAGTAGTTGAGGAAGCAATTAAGCGTGGAGCAACAGACAATCTCACGGTTGTGGTAGTG
AGTTTTCACTCTGAGCCACCACCACTGAAGGAGGTGGTACGAAGGGCAAGAGTGACAAGA
AGCATTTCAGCAGAGGGGCTTCAAAATCTCAGATCTCTGTTAGAAGGATAG

Peptide Sequence

PEP ID

VIT_11s0118g00700.t01
PEP Infomation

pep chromosome:12X:11:6467916:6472998:1 gene:VIT_11s0118g00700 transcript:VIT_11s0118g00700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCVKDSEQVSEEMENSSLSDHDATKLGNSFPLQSISEDKVASDKEQNLVSIFVPALRSGE
WSDIGGRPYMEDTHICISDLAKKFNHNLLDKEAISFYGVFDGHGGNAAAQFVRDHLPRVI
VEDADFPLALEKVVMRSFIETDAEFAKTCSLESSLSSGTTALTAMIFGRSLLVANAGDCR
AVLSQLGVAIEMSKDHRPCCTRERSRIESLGGYIDDGYLNGQISVTRALGDWHLEGLKDI
GERGGPLSAEPELKLMTLTKEHEFLIIGSDGIWEVFRSQNAVDFVRRRLQEHNDVKLCCK
EVVEEAIKRGATDNLTVVVVSFHSEPPPLKEVVRRARVTRSISAEGLQNLRSLLEG

Transcript Sequence

Transcript ID

VIT_11s0118g00700.t01
Transcript Infomation

cdna chromosome:12X:11:6467916:6472998:1 gene:VIT_11s0118g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAAATCTGGAATTAACGGCTCTCTTTCTCTGTAAAACACTCTGTAGATTTCCATTTGT
GAGGAGCTATAAAAGAGAGCCACCATTTGTCTGTCCAAGAAAGATTTCCAACATATTCTG
AGAATCTTCCTCCCACAATCCCATTATTTTTTCAGAGTCTCTCTGCTTCTTCTCATAACT
TGAGCGATTCACCATGTGTGTCAAGGACTCTGAACAGGTCTCTGAAGAAATGGAGAATTC
TAGTCTAAGTGATCATGATGCCACCAAGTTGGGTAATTCATTTCCGCTGCAAAGCATTTC
AGAAGATAAAGTGGCTTCAGACAAAGAACAGAACCTGGTATCCATCTTTGTCCCTGCTCT
TCGATCAGGGGAGTGGTCTGATATTGGGGGTCGGCCCTATATGGAGGACACTCACATATG
CATCAGTGACCTGGCTAAGAAGTTCAATCATAATTTGCTTGATAAGGAAGCTATATCCTT
CTATGGTGTATTTGATGGTCATGGAGGAAATGCTGCAGCGCAGTTTGTCCGTGACCACTT
GCCAAGGGTCATTGTCGAGGACGCTGATTTCCCCTTAGCACTGGAGAAGGTAGTTATGAG
GTCATTTATAGAGACAGATGCTGAATTCGCAAAGACATGCTCTCTTGAGTCTTCCCTGTC
TTCTGGCACAACTGCACTTACAGCGATGATATTTGGGAGGTCTTTGCTTGTGGCAAATGC
TGGGGATTGCCGGGCAGTGCTGTCACAGCTCGGAGTGGCTATAGAAATGTCGAAAGATCA
CAGGCCATGCTGCACAAGAGAAAGGAGCAGGATTGAGTCCCTGGGTGGATACATTGATGA
TGGGTATCTAAATGGTCAGATATCCGTCACCCGTGCGCTTGGTGATTGGCACCTTGAAGG
ACTGAAAGATATTGGTGAAAGGGGTGGACCTTTGAGTGCTGAACCAGAACTTAAACTAAT
GACACTAACCAAAGAACATGAGTTCTTAATCATAGGCAGTGACGGAATCTGGGAGGTGTT
TAGGAGCCAAAATGCAGTAGATTTTGTCCGGAGGAGACTCCAAGAGCACAACGATGTGAA
GCTATGCTGCAAGGAAGTAGTTGAGGAAGCAATTAAGCGTGGAGCAACAGACAATCTCAC
GGTTGTGGTAGTGAGTTTTCACTCTGAGCCACCACCACTGAAGGAGGTGGTACGAAGGGC
AAGAGTGACAAGAAGCATTTCAGCAGAGGGGCTTCAAAATCTCAGATCTCTGTTAGAAGG
ATAGAAGTTTATTTCACTTATTTTTAAGTGAAGGAGAGAACCAATTGAATAATTAATCAC
GTAGCTAATAAGCGGATATTTGGTAGAGGCCTGCTTTAGATGATAGAAACTGCATCTTCT
TTCTTCTTTACCACTGGAGCTCCATTTGATTTTCAGAAAGA