Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00610.t01
CDS Infomation

cds chromosome:12X:11:6382565:6387393:-1 gene:VIT_11s0118g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCTTCATTTCTCCACCAACCCCTATTTCCAAAGTACCCTTTCCTTCTTCACAAA
TCCCAATTCATTTCTCGCCCCCAAATTTCCTCTCTGCCCTTCCCCTCGAGATTTCGAGCC
AGCTCAGCAGTTGCTCTTGAACCGGAATCAAGCCCTCAGCTGAATAATGATATGGATTTT
GACTTGTTTTCATGTCCAGTGTGTTATGAACCGCTAATCAGAAAAGGCCCTCCAGGTCTT
AACTTGCCAGCAATCTACAGGTCTGGTTTCAAATGTAAGACTTGCAATAAGTCATATTCC
AGCAAAGACATGTATCTGGATCTCACTATTACTGCTGGGTCAAAGGCCTACAATGAAGCT
CAACCAGTTAGAACTGAGTTATTCCGGAGTCCACTTGTTTCATTTTTGTATGAAAGAGGC
TGGCGTCAAAATTTTAACCTGAGGGGTTTCCCTGGTCCTGATGAGGAGTTCAAAATGGCT
CAAGAGTACTTTAAACCTGCAGCAGGTGGGCTTCTGGTAGATGTCAGCTGTGGGAGTGGC
TTGTTTTCTCGAAAATTTGCAGAATCTGGGACCTATTCTGGAGTTGTTGCACTTGATTTT
TCCGAAAATATGCTTCATCAATGTTATGATTTCATTAAGAAAGATAACCCTAGTTTAACG
ACTAATCTTGCTCTTGTTAGAGCAGATATTTCTAGGCTTCCCTTTTCATCAGGTTCAGTT
GATGCTGTTCATGCCGGTGCAGCTTTGCATTGTTGGCCATCACCTTCTAATGCAGTTGCT
GAAATCACTCGTATATTACGAAGTGGAGGTATCTTTGTAGGAACCACTTTTCTACGACCC
ATTTATACCAATTCCTCCATTCCTGCGATATTAAGGCCTTTCAGACAGTCTATTCTTCAA
ACCTCCAACTATCTGACGGAGAAGGAGATTGAAGACCTGTGCAGATCATGCGCCCTTATC
AACTACACAAGCACAATTCAGCAATCATTCATCATGTTTTCCGCACAGAAGGCTTGA

Peptide Sequence

PEP ID

VIT_11s0118g00610.t01
PEP Infomation

pep chromosome:12X:11:6382565:6387393:-1 gene:VIT_11s0118g00610 transcript:VIT_11s0118g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASFLHQPLFPKYPFLLHKSQFISRPQISSLPFPSRFRASSAVALEPESSPQLNNDMDF
DLFSCPVCYEPLIRKGPPGLNLPAIYRSGFKCKTCNKSYSSKDMYLDLTITAGSKAYNEA
QPVRTELFRSPLVSFLYERGWRQNFNLRGFPGPDEEFKMAQEYFKPAAGGLLVDVSCGSG
LFSRKFAESGTYSGVVALDFSENMLHQCYDFIKKDNPSLTTNLALVRADISRLPFSSGSV
DAVHAGAALHCWPSPSNAVAEITRILRSGGIFVGTTFLRPIYTNSSIPAILRPFRQSILQ
TSNYLTEKEIEDLCRSCALINYTSTIQQSFIMFSAQKA

Transcript Sequence

Transcript ID

VIT_11s0118g00610.t01
Transcript Infomation

cdna chromosome:12X:11:6382565:6387393:-1 gene:VIT_11s0118g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATGGGCGAAGCCACACACCATGGACAAAGTAGATGGTGCCAAATTTGCGAGATCATAC
CGTTTCCATCAGATTCTCGACTGAAACAATTCCACTAGCCAAACACAACACAAAAACGAA
GAAGAGGAGGGTCTGAGTATGGCGATGGCTGCTTCATTTCTCCACCAACCCCTATTTCCA
AAGTACCCTTTCCTTCTTCACAAATCCCAATTCATTTCTCGCCCCCAAATTTCCTCTCTG
CCCTTCCCCTCGAGATTTCGAGCCAGCTCAGCAGTTGCTCTTGAACCGGAATCAAGCCCT
CAGCTGAATAATGATATGGATTTTGACTTGTTTTCATGTCCAGTGTGTTATGAACCGCTA
ATCAGAAAAGGCCCTCCAGGTCTTAACTTGCCAGCAATCTACAGGTCTGGTTTCAAATGT
AAGACTTGCAATAAGTCATATTCCAGCAAAGACATGTATCTGGATCTCACTATTACTGCT
GGGTCAAAGGCCTACAATGAAGCTCAACCAGTTAGAACTGAGTTATTCCGGAGTCCACTT
GTTTCATTTTTGTATGAAAGAGGCTGGCGTCAAAATTTTAACCTGAGGGGTTTCCCTGGT
CCTGATGAGGAGTTCAAAATGGCTCAAGAGTACTTTAAACCTGCAGCAGGTGGGCTTCTG
GTAGATGTCAGCTGTGGGAGTGGCTTGTTTTCTCGAAAATTTGCAGAATCTGGGACCTAT
TCTGGAGTTGTTGCACTTGATTTTTCCGAAAATATGCTTCATCAATGTTATGATTTCATT
AAGAAAGATAACCCTAGTTTAACGACTAATCTTGCTCTTGTTAGAGCAGATATTTCTAGG
CTTCCCTTTTCATCAGGTTCAGTTGATGCTGTTCATGCCGGTGCAGCTTTGCATTGTTGG
CCATCACCTTCTAATGCAGTTGCTGAAATCACTCGTATATTACGAAGTGGAGGTATCTTT
GTAGGAACCACTTTTCTACGACCCATTTATACCAATTCCTCCATTCCTGCGATATTAAGG
CCTTTCAGACAGTCTATTCTTCAAACCTCCAACTATCTGACGGAGAAGGAGATTGAAGAC
CTGTGCAGATCATGCGCCCTTATCAACTACACAAGCACAATTCAGCAATCATTCATCATG
TTTTCCGCACAGAAGGCTTGAAAATGTTATGTTATTAGTGAGAATTGATAATTTATTTTA
ATTAATTTAAAAATGTTTATATTTGAATTTATTTATTTTTTAAAATTATTATAATTATAT
TATCGAAATGGGGTTGTACCATATGAA