Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00590.t01
CDS Infomation

cds chromosome:12X:11:6366151:6372094:-1 gene:VIT_11s0118g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTATATCTGAGATCTTACTCTGCTTTTCTTCTTCTTCTTCTTCCCTTTTGTATATTC
ATAGCTTCTACTTCCTTCACATTCTCCCATGGAAGTTCTCAACTGCACCATCCCCAGCCT
TTACGTGTTCAAGAGGTGTTTGGAGGGCGGGAAAATGGTGGGTTGGTTCCATGGAAGACA
AGGAGGTCTCTTGCAGAAGGGAGCGGGGACAACTCGTCTCTGATACTGGCTGCCAAAAGA
ACTCACAGGAAAGACCCTTCCGATGGGTTCAGCTACTACACTGGTGGGTGGAATATCAGT
AATGGCCATTACTGGGCTTCTGTGAGTTACACTGCAGTTCCCTTTTTCGTCCTTGGTGGA
ATCTGGTTTGTGCTCTTTGGGCTATGCTTGTCCCTCATCTGTCTCTGTTATTGCTGTTGT
AGACGAGAACCTTATGGCTATTCTCGAACGGCCTATGCACTCTCTCTTATTTTGCTCATA
CTTTTCACCATTGCTGCCATAATTGGATGTGTTGTTCTGTACACTGGTCAGGGAAAGTTT
CATGGCAGTACAACAAGCACACTGGGATATGTGGTGGATCAGGCAGAAACAACTTCTGAA
AACCTTAAGAATGTGTCAGAATATCTCTCTGCAGCTAAGCGAATTGGAATAGGTTCTAGT
TTTCTGCCTGCAAATGTCCAGACCAACATTGATCATGCTGAAACAAAGATTAATGCTTCT
GCTACCACTCTTGACACTAAGACTCAAAAGAACTCAAAAGACATACAGGATCTCTTGGAT
GCTGTGAGGTTGGCTCTTATTGTTCTTGCCGCTGTCATGCTTCTTTTGGTATTTCTTGGG
TTTTTATTTTCCATTCTGGGATTGCAGTGTCTTGTATACTTTTTAGTGATCATTGGGTGG
ATTCTTGTTACGAGCACATTTATTTTGTGTGGCATATTTCTCCTCCTCCACAATGTGGTG
GCAGACACATGTGTTGCAATGGATGAATGGGTACAGAACCCCACTGCCCGTACAGCTTTA
GATGATATATTGCCATGTGTGGACAATGCAACTGCTCAGGAAACCTTGTTGCGAACTAAG
GATGTTACCTACCAACTTGTCACCGTGGTTAATACTGTCATCACCAATGTCAGCAATATT
AACTTTGCACCCAACTTTGTTCCTTTGTATTTCAATCAATCTGGTCCATTGGTTCCAGTT
CTCTGCAACCCGTTTAATGCTGATCTCACAGCTAGGCAATGTTCAGCTGGTGAAGTGGAC
TTGGACAATGCAACACAGGTGTGGAGCAACTATGTCTGTCAGGTATCTGCATCTGGAATA
TGTACCACTCCTGGTCGACTGACCCCCTCCTACTATAATCAAATGGCGGCTGCAGTGAAC
ATCAGCTATGGTTTGTATCATTATGGTCCATACTTGGTTGATCTCCAAGACTGCACTTTT
GTGAGGCAAACATTCACTGTTATCAGTGATGATCATTGTCCTGAGTTGCGGAAATATAGT
AAATGGATATACACTGGGTTAGTAATGGTATCTGTTGCTGTAATGATGTCATTAATCTTC
TGGGTAATCTATGCAAGAGAGCGACGACATCGTGTCTATACCAAGACGCATATGCCTAGA
AACTATGGAGCTCCATATGAAGAGAAGGCTCCATAG

Peptide Sequence

PEP ID

VIT_11s0118g00590.t01
PEP Infomation

pep chromosome:12X:11:6366151:6372094:-1 gene:VIT_11s0118g00590 transcript:VIT_11s0118g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLYLRSYSAFLLLLLPFCIFIASTSFTFSHGSSQLHHPQPLRVQEVFGGRENGGLVPWKT
RRSLAEGSGDNSSLILAAKRTHRKDPSDGFSYYTGGWNISNGHYWASVSYTAVPFFVLGG
IWFVLFGLCLSLICLCYCCCRREPYGYSRTAYALSLILLILFTIAAIIGCVVLYTGQGKF
HGSTTSTLGYVVDQAETTSENLKNVSEYLSAAKRIGIGSSFLPANVQTNIDHAETKINAS
ATTLDTKTQKNSKDIQDLLDAVRLALIVLAAVMLLLVFLGFLFSILGLQCLVYFLVIIGW
ILVTSTFILCGIFLLLHNVVADTCVAMDEWVQNPTARTALDDILPCVDNATAQETLLRTK
DVTYQLVTVVNTVITNVSNINFAPNFVPLYFNQSGPLVPVLCNPFNADLTARQCSAGEVD
LDNATQVWSNYVCQVSASGICTTPGRLTPSYYNQMAAAVNISYGLYHYGPYLVDLQDCTF
VRQTFTVISDDHCPELRKYSKWIYTGLVMVSVAVMMSLIFWVIYARERRHRVYTKTHMPR
NYGAPYEEKAP

Transcript Sequence

Transcript ID

VIT_11s0118g00590.t01
Transcript Infomation

cdna chromosome:12X:11:6366151:6372094:-1 gene:VIT_11s0118g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACGAAAAGCCGAGGATCTCAGCTTCGTAAAATAGTAATAAATCTCCTCTTCTTCTCTC
TCAAAGCAGACCGGAGGGGAGCCTGCTGTATCAGAGCGAGAGATAAGCATCATGCTATAT
CTGAGATCTTACTCTGCTTTTCTTCTTCTTCTTCTTCCCTTTTGTATATTCATAGCTTCT
ACTTCCTTCACATTCTCCCATGGAAGTTCTCAACTGCACCATCCCCAGCCTTTACGTGTT
CAAGAGGTGTTTGGAGGGCGGGAAAATGGTGGGTTGGTTCCATGGAAGACAAGGAGGTCT
CTTGCAGAAGGGAGCGGGGACAACTCGTCTCTGATACTGGCTGCCAAAAGAACTCACAGG
AAAGACCCTTCCGATGGGTTCAGCTACTACACTGGTGGGTGGAATATCAGTAATGGCCAT
TACTGGGCTTCTGTGAGTTACACTGCAGTTCCCTTTTTCGTCCTTGGTGGAATCTGGTTT
GTGCTCTTTGGGCTATGCTTGTCCCTCATCTGTCTCTGTTATTGCTGTTGTAGACGAGAA
CCTTATGGCTATTCTCGAACGGCCTATGCACTCTCTCTTATTTTGCTCATACTTTTCACC
ATTGCTGCCATAATTGGATGTGTTGTTCTGTACACTGGTCAGGGAAAGTTTCATGGCAGT
ACAACAAGCACACTGGGATATGTGGTGGATCAGGCAGAAACAACTTCTGAAAACCTTAAG
AATGTGTCAGAATATCTCTCTGCAGCTAAGCGAATTGGAATAGGTTCTAGTTTTCTGCCT
GCAAATGTCCAGACCAACATTGATCATGCTGAAACAAAGATTAATGCTTCTGCTACCACT
CTTGACACTAAGACTCAAAAGAACTCAAAAGACATACAGGATCTCTTGGATGCTGTGAGG
TTGGCTCTTATTGTTCTTGCCGCTGTCATGCTTCTTTTGGTATTTCTTGGGTTTTTATTT
TCCATTCTGGGATTGCAGTGTCTTGTATACTTTTTAGTGATCATTGGGTGGATTCTTGTT
ACGAGCACATTTATTTTGTGTGGCATATTTCTCCTCCTCCACAATGTGGTGGCAGACACA
TGTGTTGCAATGGATGAATGGGTACAGAACCCCACTGCCCGTACAGCTTTAGATGATATA
TTGCCATGTGTGGACAATGCAACTGCTCAGGAAACCTTGTTGCGAACTAAGGATGTTACC
TACCAACTTGTCACCGTGGTTAATACTGTCATCACCAATGTCAGCAATATTAACTTTGCA
CCCAACTTTGTTCCTTTGTATTTCAATCAATCTGGTCCATTGGTTCCAGTTCTCTGCAAC
CCGTTTAATGCTGATCTCACAGCTAGGCAATGTTCAGCTGGTGAAGTGGACTTGGACAAT
GCAACACAGGTGTGGAGCAACTATGTCTGTCAGGTATCTGCATCTGGAATATGTACCACT
CCTGGTCGACTGACCCCCTCCTACTATAATCAAATGGCGGCTGCAGTGAACATCAGCTAT
GGTTTGTATCATTATGGTCCATACTTGGTTGATCTCCAAGACTGCACTTTTGTGAGGCAA
ACATTCACTGTTATCAGTGATGATCATTGTCCTGAGTTGCGGAAATATAGTAAATGGATA
TACACTGGGTTAGTAATGGTATCTGTTGCTGTAATGATGTCATTAATCTTCTGGGTAATC
TATGCAAGAGAGCGACGACATCGTGTCTATACCAAGACGCATATGCCTAGAAACTATGGA
GCTCCATATGAAGAGAAGGCTCCATAGAGATTTTCTAGTTTAGTTCTTCGCATTAGATAG
TGTAGTTTCTTTAATGTATATTTGAGTGGTATACTTCTAAGTTTCTGTACATTAGAGTAG
TTACGTTTAATGCCAGCTATGATATTTGTCATGTTTTCAGCTTTC