Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00560.t01
CDS Infomation

cds chromosome:12X:11:6334601:6339391:-1 gene:VIT_11s0118g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGACACTGAAAGCAGGAAGCAGACCGCCATGGGTGGGTTTGGGAGCTGCAGTTTGG
GTACAGATTGCATCAGGCAATGCCTACACCTTTCCTCTCTACTCCCATTCTCTTAAATCC
GTTTTGGGATTCAACCAGCACCAGCTCACCATGCTCGGCGTCGCCAACGACATCGGCGAG
AACGTTGGCCTTCTACCGGGCGTTGTCTGCAACAAGTTCCCTCCTTGGGTTGTTCTTTCG
ATCGGTGCTTTTGCCTGCTTCCTTGGGTATGGTGTTCTTTGGCTTGCCTTGAGCCGTACT
CTTCTGTCCTTACCTTTTTGGTTGTTATGGTTTGCACTTTGTGTTGCCACCAACAGTAGT
GCTTGGTTGAGCACATCTGTGCTTGTGACCAACATGAGAAACTTCCCTCTCAGTCGGGGC
ACAGTAGCAGGCATTCTCAAAGGTTATGGGGGCCTCAGTGCTGCAGTATATACTGAAATT
TACACCACAACACTTCACAAATCCTCGTCCGAGCTTTTGATGTTCCTTGCCCTTGGTGTT
CCTCTTATATGTTTCACCATGATGTATTTCATCAGGCCTTGTACTCCAGCTTCTGGGGAA
GACTCTGCACAGCATGGCCATTTTCTTTTTACTCAGGCTGCCAGTGTTGTGCTCGGCTCA
TATCTTCTCACAACTACAATATTGAATGATATATTTTCTTTAAGTGCTCCAATTTCCTAT
ACTTTTCTTGCTGCAATGGTTCTCCTTCTCATGGCTCCACTAGCAATTCCTATAAAGATG
ACCTTGAACCCCACAAATCGCAGCAAATCAGGGATGCTCAACCAACCAGTTGGGTCTTCA
GAAAGTATGCTTCAAGGAGAGGAAAATGCAGACAAAACAGAACCATTGCTGACACCATCT
TCGTCAACAGCAAGCCTTGGAAGTTTTCACAAGAATGACTGTGTGTCAGAGATAGATATG
CTCCTTGCTGAGGGAGAGGGGGCAGTGAAGAAAAAGAGAAGACCCCGAAGAGGGGAAGAC
TTCAAGTTCACTGAAGCTTTAGTCAAGGTTGATTTCTGGCTTCTGTTCTTAGTCTACTTT
GCTGGTGTGGGTTCTGGGGTAACTGTTCTCAATAACCTGGCCCAGATAGGGATTGCACAA
GGTGTGCATAACACCACAATGTTGTTATGTCTCTTCAGCTTTTGTAATTTCTTGGGCCGT
CTTGGTGGAGGTGCTGTTTCTGAACATTTTCTCAGGTCAAAAACAATCCCTCGGACAATT
TGGATGACATGCACTCAAGTAATTATGGTCATTACATACCTGCTGTTTGCTTCTGCTCTT
GATGGTACCCTCTATGCTGCAACTGCATTACTTGGGATCTGCTATGGTGTTCAATTTTCT
ATCATGGTCCCGACTGTCTCTGAGCTTTTTGGCTTGAAGCATTTTGGTATTTTTTACAAT
TTCATGTCGCTGGGGAATCCTCTTGGTGCCTTTCTATTCTCTGGTCTCCTTGCAGGGTTT
GTGTATGATAATGAGGCAGCAAAGCAGCAAGGAATGAATCTACTCAATTCAAGTGTCTCT
TGCTTGGGTCCAAATTGTTTTAGACTCACCTTCCTGGTTCTGGCTGGTGTCTGTGGTGTG
GGCTCCATCCTGAGCATAATTCTGACCATGAGAATCAGACCTGTTTACCAAATGTTATAT
TCAGGAGGCTCCTTCAGGCTACCTCAAAATTCAGATCATTGA

Peptide Sequence

PEP ID

VIT_11s0118g00560.t01
PEP Infomation

pep chromosome:12X:11:6334601:6339391:-1 gene:VIT_11s0118g00560 transcript:VIT_11s0118g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVTLKAGSRPPWVGLGAAVWVQIASGNAYTFPLYSHSLKSVLGFNQHQLTMLGVANDIGE
NVGLLPGVVCNKFPPWVVLSIGAFACFLGYGVLWLALSRTLLSLPFWLLWFALCVATNSS
AWLSTSVLVTNMRNFPLSRGTVAGILKGYGGLSAAVYTEIYTTTLHKSSSELLMFLALGV
PLICFTMMYFIRPCTPASGEDSAQHGHFLFTQAASVVLGSYLLTTTILNDIFSLSAPISY
TFLAAMVLLLMAPLAIPIKMTLNPTNRSKSGMLNQPVGSSESMLQGEENADKTEPLLTPS
SSTASLGSFHKNDCVSEIDMLLAEGEGAVKKKRRPRRGEDFKFTEALVKVDFWLLFLVYF
AGVGSGVTVLNNLAQIGIAQGVHNTTMLLCLFSFCNFLGRLGGGAVSEHFLRSKTIPRTI
WMTCTQVIMVITYLLFASALDGTLYAATALLGICYGVQFSIMVPTVSELFGLKHFGIFYN
FMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGV
GSILSIILTMRIRPVYQMLYSGGSFRLPQNSDH

Transcript Sequence

Transcript ID

VIT_11s0118g00560.t01
Transcript Infomation

cdna chromosome:12X:11:6334601:6339391:-1 gene:VIT_11s0118g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTAAAGTTAGAGAACTTGTGACGGTGTGAGAGAGGCTTCTCTCAGACAAAGACCCTCCTC
CCTCTGTCCCCGTGTGTCCAAGCGAACTCCAAAAGAGGAAGGGGAAGAGGAAGAGGAAGA
GCGGAAGCTCTTGTGGTGTGAAAGTGATGGTGACACTGAAAGCAGGAAGCAGACCGCCAT
GGGTGGGTTTGGGAGCTGCAGTTTGGGTACAGATTGCATCAGGCAATGCCTACACCTTTC
CTCTCTACTCCCATTCTCTTAAATCCGTTTTGGGATTCAACCAGCACCAGCTCACCATGC
TCGGCGTCGCCAACGACATCGGCGAGAACGTTGGCCTTCTACCGGGCGTTGTCTGCAACA
AGTTCCCTCCTTGGGTTGTTCTTTCGATCGGTGCTTTTGCCTGCTTCCTTGGGTATGGTG
TTCTTTGGCTTGCCTTGAGCCGTACTCTTCTGTCCTTACCTTTTTGGTTGTTATGGTTTG
CACTTTGTGTTGCCACCAACAGTAGTGCTTGGTTGAGCACATCTGTGCTTGTGACCAACA
TGAGAAACTTCCCTCTCAGTCGGGGCACAGTAGCAGGCATTCTCAAAGGTTATGGGGGCC
TCAGTGCTGCAGTATATACTGAAATTTACACCACAACACTTCACAAATCCTCGTCCGAGC
TTTTGATGTTCCTTGCCCTTGGTGTTCCTCTTATATGTTTCACCATGATGTATTTCATCA
GGCCTTGTACTCCAGCTTCTGGGGAAGACTCTGCACAGCATGGCCATTTTCTTTTTACTC
AGGCTGCCAGTGTTGTGCTCGGCTCATATCTTCTCACAACTACAATATTGAATGATATAT
TTTCTTTAAGTGCTCCAATTTCCTATACTTTTCTTGCTGCAATGGTTCTCCTTCTCATGG
CTCCACTAGCAATTCCTATAAAGATGACCTTGAACCCCACAAATCGCAGCAAATCAGGGA
TGCTCAACCAACCAGTTGGGTCTTCAGAAAGTATGCTTCAAGGAGAGGAAAATGCAGACA
AAACAGAACCATTGCTGACACCATCTTCGTCAACAGCAAGCCTTGGAAGTTTTCACAAGA
ATGACTGTGTGTCAGAGATAGATATGCTCCTTGCTGAGGGAGAGGGGGCAGTGAAGAAAA
AGAGAAGACCCCGAAGAGGGGAAGACTTCAAGTTCACTGAAGCTTTAGTCAAGGTTGATT
TCTGGCTTCTGTTCTTAGTCTACTTTGCTGGTGTGGGTTCTGGGGTAACTGTTCTCAATA
ACCTGGCCCAGATAGGGATTGCACAAGGTGTGCATAACACCACAATGTTGTTATGTCTCT
TCAGCTTTTGTAATTTCTTGGGCCGTCTTGGTGGAGGTGCTGTTTCTGAACATTTTCTCA
GGTCAAAAACAATCCCTCGGACAATTTGGATGACATGCACTCAAGTAATTATGGTCATTA
CATACCTGCTGTTTGCTTCTGCTCTTGATGGTACCCTCTATGCTGCAACTGCATTACTTG
GGATCTGCTATGGTGTTCAATTTTCTATCATGGTCCCGACTGTCTCTGAGCTTTTTGGCT
TGAAGCATTTTGGTATTTTTTACAATTTCATGTCGCTGGGGAATCCTCTTGGTGCCTTTC
TATTCTCTGGTCTCCTTGCAGGGTTTGTGTATGATAATGAGGCAGCAAAGCAGCAAGGAA
TGAATCTACTCAATTCAAGTGTCTCTTGCTTGGGTCCAAATTGTTTTAGACTCACCTTCC
TGGTTCTGGCTGGTGTCTGTGGTGTGGGCTCCATCCTGAGCATAATTCTGACCATGAGAA
TCAGACCTGTTTACCAAATGTTATATTCAGGAGGCTCCTTCAGGCTACCTCAAAATTCAG
ATCATTGAGTTGATCAAAATGGAGCATGGAAGCGCTGGATCCTCTTGGAAAACCATTTTT
CCAAGTGAGTTTGTGTTCTTTTGGACTCTTGTCAATTCAGTGCATGTTTGAGCCCTCCTT
AAATTAGCACACTTTTACATCTGGTTTGTTTTGTCAGCATTATAAATTTATATCT