Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00390.t01
CDS Infomation

cds chromosome:12X:11:6061596:6063644:-1 gene:VIT_11s0118g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGGAAGTCCAGTTGCCACCGTCGTACCACCACTTGCCCAGAGTGTTCAAGAAATG
TCTGTGAATGGGAATGAGCCACCCCCACAATACTTCCTTAAAGAAAACAGTATCCAGCCT
ATGGATTCGTATCTGCCATCAGATCCAATTCCCATCATCGACATCAGTCTCCTCTCCTCT
TCGTCGCTATCTTCTAAAGGAGGAGAAGAAGAGCTACAGAAATTTAAATCAACTCTCACT
TCATGGGGCTGCTTTCAGGCGGTAGGCCATGGACTTTCAAGTTCATTTCTGGATAAAGTA
CGGGAAGTTGGAAAGCAATTCTTTGCACTTCCGGTGGAAGAGAAAGAAAAGTACTCTAGG
GCAACTGATGGCATCGAAGGTTATGGGAATGACCCTATTCTTTCAGAGAATCAAGTGCTT
GACTGGTCATATCGCTTGTTTCTCAGGCTACAACCAGTGGATCAAAGAAAGCTTCGACTT
TGGCCAGAGAACCCAACTGAGTTTAGAGAGGTCTTAGATGAATATGGCACAAAGGTAAAG
ATTATAATGGATGTTCTCTTTAAGGCCATGGCAAAGTCACTGAATCTGGAAGAGAATAGC
TTCTCAAGTCGATTTGGAGAGCGAGCAGTGATGCAGACAAGGTTTAATTTCTATCTGAGT
TGTCCGAGGCCTGATCTGGTTCTTGGTGTTAAACCTCATTCAGATAGATCAGGAATCACT
GTCCTTCTGCAAGACAAAGAAGTAGAAGGTCTTCAAGTTTTCAAAGATGATAAATGGTTT
AAGGTTCCTGTAATTCCCCACGCTCTTGTTGTCAACCTTGGGGATCAGATGCAGATAATG
AGTAATGGAATATTCAAGAGCCCCATACACAGGGTTGTGACAAACTCAGAAAGGATGAGG
ATATCAGTAGCTATGTTTAATGAACCTGAGCCAGAGAAGGAAATTGGACCGGTGGAGGGC
TTGATAGATGAGAAAAGGCCAAGATTATATAGAGACGTGAAAAATTATGCTTCTTTCAAC
TTTGAGTGCTTTCAAAAAGGGGTGGTACCACTTGAATCAGCAAAAATATGA

Peptide Sequence

PEP ID

VIT_11s0118g00390.t01
PEP Infomation

pep chromosome:12X:11:6061596:6063644:-1 gene:VIT_11s0118g00390 transcript:VIT_11s0118g00390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGSPVATVVPPLAQSVQEMSVNGNEPPPQYFLKENSIQPMDSYLPSDPIPIIDISLLSS
SSLSSKGGEEELQKFKSTLTSWGCFQAVGHGLSSSFLDKVREVGKQFFALPVEEKEKYSR
ATDGIEGYGNDPILSENQVLDWSYRLFLRLQPVDQRKLRLWPENPTEFREVLDEYGTKVK
IIMDVLFKAMAKSLNLEENSFSSRFGERAVMQTRFNFYLSCPRPDLVLGVKPHSDRSGIT
VLLQDKEVEGLQVFKDDKWFKVPVIPHALVVNLGDQMQIMSNGIFKSPIHRVVTNSERMR
ISVAMFNEPEPEKEIGPVEGLIDEKRPRLYRDVKNYASFNFECFQKGVVPLESAKI

Transcript Sequence

Transcript ID

VIT_11s0118g00390.t01
Transcript Infomation

cdna chromosome:12X:11:6061596:6063644:-1 gene:VIT_11s0118g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAAAGAACAACCCTCCATGTATTATTGCGTTTATCATCTCTTGGGTATCCCGCAGCATAC
CTTAAAACATGGCCGGAAGTCCAGTTGCCACCGTCGTACCACCACTTGCCCAGAGTGTTC
AAGAAATGTCTGTGAATGGGAATGAGCCACCCCCACAATACTTCCTTAAAGAAAACAGTA
TCCAGCCTATGGATTCGTATCTGCCATCAGATCCAATTCCCATCATCGACATCAGTCTCC
TCTCCTCTTCGTCGCTATCTTCTAAAGGAGGAGAAGAAGAGCTACAGAAATTTAAATCAA
CTCTCACTTCATGGGGCTGCTTTCAGGCGGTAGGCCATGGACTTTCAAGTTCATTTCTGG
ATAAAGTACGGGAAGTTGGAAAGCAATTCTTTGCACTTCCGGTGGAAGAGAAAGAAAAGT
ACTCTAGGGCAACTGATGGCATCGAAGGTTATGGGAATGACCCTATTCTTTCAGAGAATC
AAGTGCTTGACTGGTCATATCGCTTGTTTCTCAGGCTACAACCAGTGGATCAAAGAAAGC
TTCGACTTTGGCCAGAGAACCCAACTGAGTTTAGAGAGGTCTTAGATGAATATGGCACAA
AGGTAAAGATTATAATGGATGTTCTCTTTAAGGCCATGGCAAAGTCACTGAATCTGGAAG
AGAATAGCTTCTCAAGTCGATTTGGAGAGCGAGCAGTGATGCAGACAAGGTTTAATTTCT
ATCTGAGTTGTCCGAGGCCTGATCTGGTTCTTGGTGTTAAACCTCATTCAGATAGATCAG
GAATCACTGTCCTTCTGCAAGACAAAGAAGTAGAAGGTCTTCAAGTTTTCAAAGATGATA
AATGGTTTAAGGTTCCTGTAATTCCCCACGCTCTTGTTGTCAACCTTGGGGATCAGATGC
AGATAATGAGTAATGGAATATTCAAGAGCCCCATACACAGGGTTGTGACAAACTCAGAAA
GGATGAGGATATCAGTAGCTATGTTTAATGAACCTGAGCCAGAGAAGGAAATTGGACCGG
TGGAGGGCTTGATAGATGAGAAAAGGCCAAGATTATATAGAGACGTGAAAAATTATGCTT
CTTTCAACTTTGAGTGCTTTCAAAAAGGGGTGGTACCACTTGAATCAGCAAAAATATGAG
TCTCAATTCTCATTGTCTTCATATCCTCTGTTTTTCCAGAAAAGGGTGAGAATTCTATTT
CTTGTTCAGAACTAGTTCAACTAAAATCTCTGAGCTTATGTTATTGAGTCATGTGATCTT
CATCTGCAAAACAGGCTTAGAGTATTTTAATCTATATATATATATAGTGGGATCTAATTG
AC