Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00330.t01
CDS Infomation

cds chromosome:12X:11:5975363:5979684:-1 gene:VIT_11s0118g00330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTTTTGATATCATGGGGAAAAGGAAGCGCCCCTCTCAGCTTCATCCCTTCACCTCC
GATTCTCCTCTTTCTTCTGCTTCTTCTGACACCATGCCTTGTTCCTCTGGAATGGATTTG
TTAACAGAGAAATCTTCACATTTAACTGAAGCCGGTGCTCTCAAGCCTCTCACATCGGTC
ATGGATATGACAGATAGTTCTTTGAAGCTATCAAATCCCCATCATCCACTTTCACATCAT
CATTACAATCTCAGTCGTACGTTACTTTTAAGACGTTCACGGCATCACTATGGTCATCAA
TATTCTCGAAGGAATTCAGCCAACCATGCTGATGCTTCAACTTCTCATGGCAAGATCACT
CCTTCATGTGATGAGAAACTGTCCTTCAAGTTGGCTAACCATTCCAAGTCAGACTTTGGA
CAACACACTGGGAGTAGGGAAAAAGCCTTTTTCCGGCCAGAAAGAATTAGGTCAAGTTCA
TCAGTGGTGGATGCAGTATCTCTTGATATGGTGAGGATGGTTTGTGGAATATGTCAGAGG
CCATTGAGGCGGAAACCTTACTGTCTAGAAAATGTACTCTCTTCAAGTGAGCTCTCTGTT
GTGGCAGTTTTAGTTTGTGGTCATGTTTATCATGCAGACTGTTTGGAGCAGAGAACATGT
CATGAAGATAGACAGGACCCTCCCTGCCCATTATGTGTAGGCTTGCTCTCCAAGGTTGAT
GACTCAGGAGGACAGGAATAA

Peptide Sequence

PEP ID

VIT_11s0118g00330.t01
PEP Infomation

pep chromosome:12X:11:5975363:5979684:-1 gene:VIT_11s0118g00330 transcript:VIT_11s0118g00330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPFDIMGKRKRPSQLHPFTSDSPLSSASSDTMPCSSGMDLLTEKSSHLTEAGALKPLTSV
MDMTDSSLKLSNPHHPLSHHHYNLSRTLLLRRSRHHYGHQYSRRNSANHADASTSHGKIT
PSCDEKLSFKLANHSKSDFGQHTGSREKAFFRPERIRSSSSVVDAVSLDMVRMVCGICQR
PLRRKPYCLENVLSSSELSVVAVLVCGHVYHADCLEQRTCHEDRQDPPCPLCVGLLSKVD
DSGGQE

Transcript Sequence

Transcript ID

VIT_11s0118g00330.t01
Transcript Infomation

cdna chromosome:12X:11:5975363:5979684:-1 gene:VIT_11s0118g00330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCGTGGAGGGAGGTTAAACGGCGATGCCTCCGCCGTATGTTTCTGTGTAGATTAATGCT
GCACCACTGCTAAACCAAAGAAACCAAGCCCTAGAATTGGCGGTTTTTTGTGGCCGTTAC
TTCCATGCCTTTTGATATCATGGGGAAAAGGAAGCGCCCCTCTCAGCTTCATCCCTTCAC
CTCCGATTCTCCTCTTTCTTCTGCTTCTTCTGACACCATGCCTTGTTCCTCTGGAATGGA
TTTGTTAACAGAGAAATCTTCACATTTAACTGAAGCCGGTGCTCTCAAGCCTCTCACATC
GGTCATGGATATGACAGATAGTTCTTTGAAGCTATCAAATCCCCATCATCCACTTTCACA
TCATCATTACAATCTCAGTCGTACGTTACTTTTAAGACGTTCACGGCATCACTATGGTCA
TCAATATTCTCGAAGGAATTCAGCCAACCATGCTGATGCTTCAACTTCTCATGGCAAGAT
CACTCCTTCATGTGATGAGAAACTGTCCTTCAAGTTGGCTAACCATTCCAAGTCAGACTT
TGGACAACACACTGGGAGTAGGGAAAAAGCCTTTTTCCGGCCAGAAAGAATTAGGTCAAG
TTCATCAGTGGTGGATGCAGTATCTCTTGATATGGTGAGGATGGTTTGTGGAATATGTCA
GAGGCCATTGAGGCGGAAACCTTACTGTCTAGAAAATGTACTCTCTTCAAGTGAGCTCTC
TGTTGTGGCAGTTTTAGTTTGTGGTCATGTTTATCATGCAGACTGTTTGGAGCAGAGAAC
ATGTCATGAAGATAGACAGGACCCTCCCTGCCCATTATGTGTAGGCTTGCTCTCCAAGGT
TGATGACTCAGGAGGACAGGAATAACCGTACATATACTGACTTAATACAAGAAACATAAC
ATATTCAGAGGGAAATATAGGTGTTTTATATATCTCAGACTGAATGTTCCGTCAGGTAGG
AGTTTTACCCTGCTTTTAGTGCAAATTGCTATCTATTTGATTTAGTTTTCAAATGTTCTG
CTAGGCAGATCAGAAAAGCACCTATGTCGTGTTCCTGCAAATGATACATGTAAATTGAAG
TAATTCTATTTGGATGCCATTAATAATGTAAATTGCATTCCCTTCTGAT