Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00230.t01
CDS Infomation

cds chromosome:12X:11:5843896:5869373:1 gene:VIT_11s0118g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGTTTTTTCTGGGGCTGGTGATAGGAATAACAGTGGGAATTGGGCTGATCGTGCTG
TTCGTGCGATCGGAGAACATCCGGTCGAAGCAGCGGTCCGCCCTCGCCACTACCGTTGCT
GCTTTGGCTAGAATGACTGTGGAAGATTCTAGAAAGATCCTCCCTTCCAAGTTTTACCCT
TCCTGGGTCGTCTTCTCACAGCGCCAAAAGTTGACATGGCTTAATCACCATCTCACGAAG
ATCTGGCCCTATGTGAATGAGGCAGCGTCTGAGCTTATAAGGACTAATGTTGAGCCGATT
TTGGAGCAATATAGGCCGATGATATTGTCGTCCCTGAAATTCTCGAGATTCACTCTTGGG
ACTGTGTCACCGCAATTCACAGGAGTATCTATTATTGAAGATGGAGCTGACTGTATTACC
TTGGAGTTGGAGCTTCAGTGGGATGGAAATCCAAGTATAATACTTGACATAAATACTAGA
CTTGGTGTAGCACTACCTGTGCAGGTAAAAAATATTGGATTCACCGGGGTTTTCAGGTTG
ATGTTTAAGCCACTAGTTGATGAGTTCCCTTGCTTTGGAGCTGTTTGCTTTTCTCTGAGA
CAAAAGAAAAAGTTGGATTTGACTCTTAAAGTTGTTGGTGGGGACATATCGGCAATTCCT
GGGATTTCTGATGCTATTAAGGACACAATAGATAATGCTATTGAAGATTCCATTATGTGG
CCAGTTCGAAAAGTTGTTCCCATTTTGCCTGGGGATTACAGTGACCTTGAGTTGAAGCCT
GTTGGAACATTGGAGGTGAAGCTTGTACAAGCAAAGGAATTAACAAATAAGGACATCATT
GGGAAATCAGATCCTTTTGCTGTATTATATGTACGGCCTCTACCTAACAGAATGAAAACC
AGCAAAACAATTAACAACCAGTTGAATCCAGTCTGGAATGAACACTTCGAATTTATTGTT
GAAGATGCATCCACTCAACACTTGGTGGTAAAAATATACGATAATGAGGGGCTTCAGGCA
TCTGAATTAATTGGATGTGCTCAAGTACAGCTACGTGAGCTTGAGCCCGGTAAAGTGAAG
GATGCGTGGTGGAAACTGGTAAAAGATTTGGAGGTCCAGAGAGATACTAAAAACAGGGGA
CAGGTGCACTTGGAGCTTCTGTATGTTCCTTTTGGCATGGAGAATGGGTTTACAAACCCT
TTTGCCCCTAAATTTTCAATGACATCCCTGGAGAAGGTTCTTAAAAATGGAGTGGATGGA
ACTGAAGTTGCTGAAAATGGAAATGCAGTCATGCAGAAAAAAAGGGAGGTTATTGTTAGG
GGAGTACTTTCTATAACTGTGATATCTGCAGAAGACTTGCCTGTGGTAGATCTAATGGGA
AAAGCCGACCCCTATGTTGTACTTATTTTGAAAAAATCAGAAATCAGGAACAAAACTAGG
GTTGTGAATGATAGCTTGAATCCAGTTTGGAATCAAACTTTTGACTTTGTTGTTGAGGAT
GGATTGCATGATATGCTGATTCTGGAAGTCTGGGACCATGACACATTTGGGAAGGACTAT
ATGGGAAGGTGCATCTTGACTCTGACTAGGGTTATATTGGAGGGGGAATACAAAGAAACC
TTCCAGCTGGATGAAGCCAAATCTGGAAGACTCAATTTGCATCTCAAGTGGATGCCACAA
CCAATTTACAGGGACCGTGAGTGA

Peptide Sequence

PEP ID

VIT_11s0118g00230.t01
PEP Infomation

pep chromosome:12X:11:5843896:5869373:1 gene:VIT_11s0118g00230 transcript:VIT_11s0118g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSFFLGLVIGITVGIGLIVLFVRSENIRSKQRSALATTVAALARMTVEDSRKILPSKFYP
SWVVFSQRQKLTWLNHHLTKIWPYVNEAASELIRTNVEPILEQYRPMILSSLKFSRFTLG
TVSPQFTGVSIIEDGADCITLELELQWDGNPSIILDINTRLGVALPVQVKNIGFTGVFRL
MFKPLVDEFPCFGAVCFSLRQKKKLDLTLKVVGGDISAIPGISDAIKDTIDNAIEDSIMW
PVRKVVPILPGDYSDLELKPVGTLEVKLVQAKELTNKDIIGKSDPFAVLYVRPLPNRMKT
SKTINNQLNPVWNEHFEFIVEDASTQHLVVKIYDNEGLQASELIGCAQVQLRELEPGKVK
DAWWKLVKDLEVQRDTKNRGQVHLELLYVPFGMENGFTNPFAPKFSMTSLEKVLKNGVDG
TEVAENGNAVMQKKREVIVRGVLSITVISAEDLPVVDLMGKADPYVVLILKKSEIRNKTR
VVNDSLNPVWNQTFDFVVEDGLHDMLILEVWDHDTFGKDYMGRCILTLTRVILEGEYKET
FQLDEAKSGRLNLHLKWMPQPIYRDRE

Transcript Sequence

Transcript ID

VIT_11s0118g00230.t01
Transcript Infomation

cdna chromosome:12X:11:5843896:5869373:1 gene:VIT_11s0118g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGCCTCACAGAAATGTCGTTTTTTCTGGGGCTGGTGATAGGAATAACAGTGGGAATTG
GGCTGATCGTGCTGTTCGTGCGATCGGAGAACATCCGGTCGAAGCAGCGGTCCGCCCTCG
CCACTACCGTTGCTGCTTTGGCTAGAATGACTGTGGAAGATTCTAGAAAGATCCTCCCTT
CCAAGTTTTACCCTTCCTGGGTCGTCTTCTCACAGCGCCAAAAGTTGACATGGCTTAATC
ACCATCTCACGAAGATCTGGCCCTATGTGAATGAGGCAGCGTCTGAGCTTATAAGGACTA
ATGTTGAGCCGATTTTGGAGCAATATAGGCCGATGATATTGTCGTCCCTGAAATTCTCGA
GATTCACTCTTGGGACTGTGTCACCGCAATTCACAGGAGTATCTATTATTGAAGATGGAG
CTGACTGTATTACCTTGGAGTTGGAGCTTCAGTGGGATGGAAATCCAAGTATAATACTTG
ACATAAATACTAGACTTGGTGTAGCACTACCTGTGCAGGTAAAAAATATTGGATTCACCG
GGGTTTTCAGGTTGATGTTTAAGCCACTAGTTGATGAGTTCCCTTGCTTTGGAGCTGTTT
GCTTTTCTCTGAGACAAAAGAAAAAGTTGGATTTGACTCTTAAAGTTGTTGGTGGGGACA
TATCGGCAATTCCTGGGATTTCTGATGCTATTAAGGACACAATAGATAATGCTATTGAAG
ATTCCATTATGTGGCCAGTTCGAAAAGTTGTTCCCATTTTGCCTGGGGATTACAGTGACC
TTGAGTTGAAGCCTGTTGGAACATTGGAGGTGAAGCTTGTACAAGCAAAGGAATTAACAA
ATAAGGACATCATTGGGAAATCAGATCCTTTTGCTGTATTATATGTACGGCCTCTACCTA
ACAGAATGAAAACCAGCAAAACAATTAACAACCAGTTGAATCCAGTCTGGAATGAACACT
TCGAATTTATTGTTGAAGATGCATCCACTCAACACTTGGTGGTAAAAATATACGATAATG
AGGGGCTTCAGGCATCTGAATTAATTGGATGTGCTCAAGTACAGCTACGTGAGCTTGAGC
CCGGTAAAGTGAAGGATGCGTGGTGGAAACTGGTAAAAGATTTGGAGGTCCAGAGAGATA
CTAAAAACAGGGGACAGGTGCACTTGGAGCTTCTGTATGTTCCTTTTGGCATGGAGAATG
GGTTTACAAACCCTTTTGCCCCTAAATTTTCAATGACATCCCTGGAGAAGGTTCTTAAAA
ATGGAGTGGATGGAACTGAAGTTGCTGAAAATGGAAATGCAGTCATGCAGAAAAAAAGGG
AGGTTATTGTTAGGGGAGTACTTTCTATAACTGTGATATCTGCAGAAGACTTGCCTGTGG
TAGATCTAATGGGAAAAGCCGACCCCTATGTTGTACTTATTTTGAAAAAATCAGAAATCA
GGAACAAAACTAGGGTTGTGAATGATAGCTTGAATCCAGTTTGGAATCAAACTTTTGACT
TTGTTGTTGAGGATGGATTGCATGATATGCTGATTCTGGAAGTCTGGGACCATGACACAT
TTGGGAAGGACTATATGGGAAGGTGCATCTTGACTCTGACTAGGGTTATATTGGAGGGGG
AATACAAAGAAACCTTCCAGCTGGATGAAGCCAAATCTGGAAGACTCAATTTGCATCTCA
AGTGGATGCCACAACCAATTTACAGGGACCGTGAGTGATCCATGTTCCTTGGCAGATGGT
CAATCTTGGTTATATCCCTCTTCCACAGAAAATGTGTACAAATGATGCCCACCTGCAAAT
TCATTGATCAATAAGCCTACAGTAATTGTAATAGCAAACAGGTGTACATAATTGTTTCAC