Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00180.t01
CDS Infomation

cds chromosome:12X:11:5751889:5753976:-1 gene:VIT_11s0118g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGGTGAAACCCACCATCCCCACCACCACCCCCACCACCATCACCCCCACCACAAC
CACCACCACTCTCACTCTAGTTCTTTCACAATCGACAACAACCCCAAGAAGAAGAATCTG
CAGGCCTCAAGCAAAGGCGAGCGATGCGCTCTGGTGACGTTTCGGGAGTTGCCGGATTAC
ATGAAGGACAACGAGTTCATACTGAATTATTACAGAGCCAATTGGTCTCTTAAGGAAGCT
CTCTTCAGCGTCTTTCGGTGGCATAATGAGACAGTTAACGTTTGGACGCATTTGCTTGGA
TTTATTCTATTCTTGGGGTTGACTCTGGCGAATTTGATGCAAGTGCCTCAGTTTGCGGAT
TTCTTTACCAATTTCAGCTGGTCTTTTCCACTGTGCGCAGCTATAAATGCTTCTCATGAT
TCAAAAGATTTCTCTCTGGGCACATCAAACCTCATCCAATTGAAGCAAATAACACAGCCA
GAAACCGAGTTCCTGTCACCAGAAATGGCCACAACACGGTGGCCGTTCTTCATCTTCTTG
GGTGGCTCCATGTTCTGTCTGCTCTCAAGCAGCGTTTGCCACCTCTTCTCCTGCCACTCC
CGCAGCTTGAACATCTTGTTGCTGCGAATGGACTATGTTGGAATCGCTGTCATGATCATC
ACCTCCTTCTTCCCCCCAATCTACTACATCTTCCAATGTGACCCCCACTGGCAATTCATT
TACCTTGCTGGGATCACAGCCATGGGGATGTTCACCATCATAACACTGCTCTCCCCATCC
CTTTCAAGTGCCAAATATCGCGCTTTTCGAGCCTCACTCTTCGCAGCCATGGGGTTATTT
GGCATTCTGCCTGCAATCCATGCTGTCATTGTGAATTGGAATGAACCCCGGAAATCTATA
ACCCTGGTCTATGAGTTGGCCATGGCTCTATCCTATGGGATTGGTACCATATTCTATGTT
ACTCGAATTCCGGAGAGGTGGAAGCCCGGCTGCTTCGACATCGCCGGACATAGTCATCAA
ATATTTCATGTTTTGGTGGTGATGGGGGCATTGGCTCACTACGGTGCCACACTCGTATTT
TTGGAGTGGCGCAATTCAGTAGGGTGTGTGTAA

Peptide Sequence

PEP ID

VIT_11s0118g00180.t01
PEP Infomation

pep chromosome:12X:11:5751889:5753976:-1 gene:VIT_11s0118g00180 transcript:VIT_11s0118g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGETHHPHHHPHHHHPHHNHHHSHSSSFTIDNNPKKKNLQASSKGERCALVTFRELPDY
MKDNEFILNYYRANWSLKEALFSVFRWHNETVNVWTHLLGFILFLGLTLANLMQVPQFAD
FFTNFSWSFPLCAAINASHDSKDFSLGTSNLIQLKQITQPETEFLSPEMATTRWPFFIFL
GGSMFCLLSSSVCHLFSCHSRSLNILLLRMDYVGIAVMIITSFFPPIYYIFQCDPHWQFI
YLAGITAMGMFTIITLLSPSLSSAKYRAFRASLFAAMGLFGILPAIHAVIVNWNEPRKSI
TLVYELAMALSYGIGTIFYVTRIPERWKPGCFDIAGHSHQIFHVLVVMGALAHYGATLVF
LEWRNSVGCV

Transcript Sequence

Transcript ID

VIT_11s0118g00180.t01
Transcript Infomation

cdna chromosome:12X:11:5751889:5753976:-1 gene:VIT_11s0118g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAATTGCAAGGACACAGACACTTGAAGCCAGTGCCAGAAGCATCTTCACAGCGTCTGCGG
AGGACACATGAGCTTCACCGAGGGGTCTGTTTGGAAGAAGAGAAAAGGAACGAAAATGGA
TGGTGAAACCCACCATCCCCACCACCACCCCCACCACCATCACCCCCACCACAACCACCA
CCACTCTCACTCTAGTTCTTTCACAATCGACAACAACCCCAAGAAGAAGAATCTGCAGGC
CTCAAGCAAAGGCGAGCGATGCGCTCTGGTGACGTTTCGGGAGTTGCCGGATTACATGAA
GGACAACGAGTTCATACTGAATTATTACAGAGCCAATTGGTCTCTTAAGGAAGCTCTCTT
CAGCGTCTTTCGGTGGCATAATGAGACAGTTAACGTTTGGACGCATTTGCTTGGATTTAT
TCTATTCTTGGGGTTGACTCTGGCGAATTTGATGCAAGTGCCTCAGTTTGCGGATTTCTT
TACCAATTTCAGCTGGTCTTTTCCACTGTGCGCAGCTATAAATGCTTCTCATGATTCAAA
AGATTTCTCTCTGGGCACATCAAACCTCATCCAATTGAAGCAAATAACACAGCCAGAAAC
CGAGTTCCTGTCACCAGAAATGGCCACAACACGGTGGCCGTTCTTCATCTTCTTGGGTGG
CTCCATGTTCTGTCTGCTCTCAAGCAGCGTTTGCCACCTCTTCTCCTGCCACTCCCGCAG
CTTGAACATCTTGTTGCTGCGAATGGACTATGTTGGAATCGCTGTCATGATCATCACCTC
CTTCTTCCCCCCAATCTACTACATCTTCCAATGTGACCCCCACTGGCAATTCATTTACCT
TGCTGGGATCACAGCCATGGGGATGTTCACCATCATAACACTGCTCTCCCCATCCCTTTC
AAGTGCCAAATATCGCGCTTTTCGAGCCTCACTCTTCGCAGCCATGGGGTTATTTGGCAT
TCTGCCTGCAATCCATGCTGTCATTGTGAATTGGAATGAACCCCGGAAATCTATAACCCT
GGTCTATGAGTTGGCCATGGCTCTATCCTATGGGATTGGTACCATATTCTATGTTACTCG
AATTCCGGAGAGGTGGAAGCCCGGCTGCTTCGACATCGCCGGACATAGTCATCAAATATT
TCATGTTTTGGTGGTGATGGGGGCATTGGCTCACTACGGTGCCACACTCGTATTTTTGGA
GTGGCGCAATTCAGTAGGGTGTGTGTAATATATCTCATAAGCAATATTATGTAGTTGTTG
GTATTGTGGCAGAAGATATATTCCTCAAGAAAACAATATTCACAAGGGGTTGCTAAGAAT
ATCACTAATC